RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 WDFY3Q8IZQ1 3526 aa-3.88□□□□□ -3.03
RNU6-542P-201ENST00000516405 ARPC5O15511 151 aa-3.89□□□□□ -3.03
RNU6-542P-201ENST00000516405 HPGDSO60760 199 aa-3.89□□□□□ -3.03
RNU6-542P-201ENST00000516405 STAG3L2P0CL84 134 aa-3.89□□□□□ -3.03
RNU6-542P-201ENST00000516405 MLLT11Q13015 90 aaPredicted RBP-3.89□□□□□ -3.03
RNU6-542P-201ENST00000516405 Q8N8P6 123 aa-3.89□□□□□ -3.03
RNU6-542P-201ENST00000516405 SPRR4Q96PI1 79 aa-3.89□□□□□ -3.03
RNU6-542P-201ENST00000516405 ANKRD36A6QL64 1941 aa-3.89□□□□□ -3.03
RNU6-542P-201ENST00000516405 DLC1Q96QB1 1528 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 CENPEQ02224 2701 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 ATAD2BQ9ULI0 1458 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 TRBV19A0A075B6N1 114 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 YPEL1O60688 119 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 CYBAP13498 195 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 KDELR2P33947 212 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 RPL35P42766 123 aaKnown RBP-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 TMEM170BQ5T4T1 132 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 KRTAP8-1Q8IUC2 63 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 IFT20Q8IY31 132 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 RNASE7Q9H1E1 156 aaKnown RBP-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 NDUFA4L2Q9NRX3 87 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 ERG28Q9UKR5 140 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 RGPD2P0DJD1 1756 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 CD109Q6YHK3 1445 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 KIF27Q86VH2 1401 aa-3.9□□□□□ -3.03
RNU6-542P-201ENST00000516405 M0R135 149 aa-3.91□□□□□ -3.04
RNU6-542P-201ENST00000516405 TTRP02766 147 aa-3.91□□□□□ -3.04
RNU6-542P-201ENST00000516405 IFNA6P05013 189 aa-3.91□□□□□ -3.04
RNU6-542P-201ENST00000516405 HEPN1Q6WQI6 88 aa-3.91□□□□□ -3.04
RNU6-542P-201ENST00000516405 SMG6Q86US8 1419 aaKnown RBP-3.91□□□□□ -3.04
RNU6-542P-201ENST00000516405 MCEEQ96PE7 176 aa-3.91□□□□□ -3.04
RNU6-542P-201ENST00000516405 UQCC1Q9NVA1 299 aa-3.91□□□□□ -3.04
RNU6-542P-201ENST00000516405 ADGBQ8N7X0 1667 aa-3.91□□□□□ -3.04
RNU6-542P-201ENST00000516405 EVC2Q86UK5 1308 aa-3.92□□□□□ -3.04
RNU6-542P-201ENST00000516405 IGHV1-24A0A0C4DH33 117 aa-3.92□□□□□ -3.04
RNU6-542P-201ENST00000516405 SLC25A4P12235 298 aa-3.92□□□□□ -3.04
RNU6-542P-201ENST00000516405 TPT1P13693 172 aaKnown RBP-3.92□□□□□ -3.04
RNU6-542P-201ENST00000516405 MED21Q13503 144 aa-3.92□□□□□ -3.04
RNU6-542P-201ENST00000516405 OR51A4Q8NGJ6 313 aa-3.92□□□□□ -3.04
RNU6-542P-201ENST00000516405 PHB2Q99623 299 aa-3.92□□□□□ -3.04
RNU6-542P-201ENST00000516405 PSME4Q14997 1843 aa-3.93□□□□□ -3.04
RNU6-542P-201ENST00000516405 CTXND1A0A1B0GTU2 59 aa-3.93□□□□□ -3.04
RNU6-542P-201ENST00000516405 MAXP61244 160 aa-3.93□□□□□ -3.04
RNU6-542P-201ENST00000516405 TMCO2Q7Z6W1 182 aaPredicted RBP-3.93□□□□□ -3.04
RNU6-542P-201ENST00000516405 MORN4Q8NDC4 146 aa-3.93□□□□□ -3.04
RNU6-542P-201ENST00000516405 AP3S1Q92572 193 aa-3.93□□□□□ -3.04
RNU6-542P-201ENST00000516405 MRPL34Q9BQ48 92 aaKnown RBP-3.93□□□□□ -3.04
RNU6-542P-201ENST00000516405 TCOF1Q13428 1488 aaKnown RBP-3.93□□□□□ -3.04
RNU6-542P-201ENST00000516405 YTHDC2Q9H6S0 1430 aaKnown RBP-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 PFDN6O15212 129 aa-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 TRGC2P03986 189 aa-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 STAG3L3P0CL85 134 aa-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 GALP22466 123 aa-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 RPS12P25398 132 aaKnown RBP-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 UBE2D1P51668 147 aa-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 SDHAF4Q5VUM1 108 aa-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 AKAP14Q86UN6 197 aa-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 WFDC9Q8NEX5 89 aa-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 OTOSQ8NHW6 89 aa-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 CDKN2A-AS1Q9UH64 79 aa-3.94□□□□□ -3.04
RNU6-542P-201ENST00000516405 CCDC171Q6TFL3 1326 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 SMLR1H3BR10 107 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 PIRTP0C851 137 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 NEFHP12036 1026 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 TCL1AP56279 114 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 SPCS3P61009 180 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 BLCAPP62952 87 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 TNNC1P63316 161 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 SLC25A26Q70HW3 274 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 ABCC11Q96J66 1382 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 CAMSAP2Q08AD1 1489 aa-3.95□□□□□ -3.04
RNU6-542P-201ENST00000516405 QRICH2Q9H0J4 1663 aa-3.96□□□□□ -3.04
RNU6-542P-201ENST00000516405 TRAV30A0A087WSZ9 112 aa-3.96□□□□□ -3.04
RNU6-542P-201ENST00000516405 CMPK1P30085 196 aa-3.96□□□□□ -3.04
RNU6-542P-201ENST00000516405 COTL1Q14019 142 aa-3.96□□□□□ -3.04
RNU6-542P-201ENST00000516405 COX17Q14061 63 aa-3.96□□□□□ -3.04
RNU6-542P-201ENST00000516405 AKR1C8PQ5T2L2 129 aa-3.96□□□□□ -3.04
RNU6-542P-201ENST00000516405 LRTM1Q9HBL6 345 aa-3.96□□□□□ -3.04
RNU6-542P-201ENST00000516405 LSM5Q9Y4Y9 91 aaKnown RBP-3.96□□□□□ -3.04
RNU6-542P-201ENST00000516405 CEP350Q5VT06 3117 aa-3.96□□□□□ -3.04
RNU6-542P-201ENST00000516405 NCOA3Q9Y6Q9 1424 aa-3.96□□□□□ -3.04
RNU6-542P-201ENST00000516405 A0A0G2JMZ2 1700 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 C4AP0C0L4 1744 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 C4BP0C0L5 1744 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 TGIF2-C20orf24A0A0A6YYL0 155 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 TRAV2A0A0B4J234 112 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 I3L3M4 83 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 KPNA4O00629 521 aaPredicted RBP-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 SSNA1O43805 119 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 IFNA7P01567 189 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 RPS17P08708 135 aaKnown RBP-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 OCMP0CE72 109 aaPredicted RBP-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 CCL2P13500 99 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 CKS2P33552 79 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 OMPP47874 163 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 OTUD6BQ8N6M0 293 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 DCUN1D1Q96GG9 259 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 BZW2Q9Y6E2 419 aaKnown RBP-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 RAPGEF6Q8TEU7 1601 aa-3.97□□□□□ -3.04
RNU6-542P-201ENST00000516405 SCN11AQ9UI33 1791 aa-3.98□□□□□ -3.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms