RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 IGHV4-59P01825 116 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 TM2D2Q9BX73 214 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 MIAQ16674 131 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 GDF5OSQ5U4N7 250 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 SPRY4Q9C004 299 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 DENND4AQ7Z401 1863 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 PLXNB1O43157 2135 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 C2CD3Q4AC94 2353 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 PLA2G5P39877 138 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 SPATA25Q9BR10 227 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 SORL1Q92673 2214 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 E7EUB6 86 aa10.19□□□□□ -0.78
TCOF1-214ENST00000515035 IGLV2-8P01709 118 aa10.19□□□□□ -0.78
TCOF1-214ENST00000515035 PROP1O75360 226 aa10.19□□□□□ -0.78
TCOF1-214ENST00000515035 PDE6GP18545 87 aa10.19□□□□□ -0.78
TCOF1-214ENST00000515035 UPK3BQ9BT76 320 aa10.19□□□□□ -0.78
TCOF1-214ENST00000515035 DEFB112Q30KQ8 113 aa10.19□□□□□ -0.78
TCOF1-214ENST00000515035 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
TCOF1-214ENST00000515035 C16orf74Q96GX8 76 aa10.19□□□□□ -0.78
TCOF1-214ENST00000515035 LINC00322Q6ZN03 302 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-214ENST00000515035 SDIM1Q6ZPB5 146 aa10.18□□□□□ -0.78
TCOF1-214ENST00000515035 NFE4Q86UQ8 179 aa10.18□□□□□ -0.78
TCOF1-214ENST00000515035 DIRC1Q969H9 104 aa10.18□□□□□ -0.78
TCOF1-214ENST00000515035 DKK4Q9UBT3 224 aa10.18□□□□□ -0.78
TCOF1-214ENST00000515035 VPREB3Q9UKI3 123 aa10.18□□□□□ -0.78
TCOF1-214ENST00000515035 FAM236DA0A1B0GTK5 79 aa10.18□□□□□ -0.78
TCOF1-214ENST00000515035 FAM236CP0DP71 79 aa10.18□□□□□ -0.78
TCOF1-214ENST00000515035 DEFB1P60022 68 aa10.18□□□□□ -0.78
TCOF1-214ENST00000515035 A0A0J9YXY3 114 aa10.18□□□□□ -0.78
TCOF1-214ENST00000515035 SLURP1P55000 103 aa10.18□□□□□ -0.78
TCOF1-214ENST00000515035 ACACBO00763 2458 aa10.17□□□□□ -0.78
TCOF1-214ENST00000515035 DAZAP2Q15038 168 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-214ENST00000515035 MPLKIPQ8TAP9 179 aa10.17□□□□□ -0.78
TCOF1-214ENST00000515035 BLCAPP62952 87 aa10.17□□□□□ -0.78
TCOF1-214ENST00000515035 ADORA2A-AS1P86434 159 aa10.17□□□□□ -0.78
TCOF1-214ENST00000515035 Q8N9W7 124 aa10.17□□□□□ -0.78
TCOF1-214ENST00000515035 A0A1W2PNU3 283 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-214ENST00000515035 NDUFA1O15239 70 aa10.16□□□□□ -0.78
TCOF1-214ENST00000515035 CXCL5P42830 114 aa10.16□□□□□ -0.78
TCOF1-214ENST00000515035 C3orf22Q8N5N4 141 aa10.16□□□□□ -0.78
TCOF1-214ENST00000515035 CCL24O00175 119 aa10.16□□□□□ -0.78
TCOF1-214ENST00000515035 HIST2H2BDQ6DRA6 164 aa10.16□□□□□ -0.78
TCOF1-214ENST00000515035 FAM110AQ9BQ89 295 aa10.16□□□□□ -0.78
TCOF1-214ENST00000515035 MRPL55Q7Z7F7 128 aaKnown RBP10.16□□□□□ -0.78
TCOF1-214ENST00000515035 PKIGQ9Y2B9 76 aa10.16□□□□□ -0.78
TCOF1-214ENST00000515035 CEMP1Q6PRD7 247 aaPredicted RBP10.15□□□□□ -0.78
TCOF1-214ENST00000515035 ODF3L1Q8IXM7 274 aa10.15□□□□□ -0.78
TCOF1-214ENST00000515035 NOTCH2Q04721 2471 aa10.15□□□□□ -0.78
TCOF1-214ENST00000515035 A0A0U1RQV1 116 aa10.15□□□□□ -0.78
TCOF1-214ENST00000515035 IGHV3-30P01768 117 aa10.15□□□□□ -0.78
TCOF1-214ENST00000515035 IGHV3-33P01772 117 aa10.15□□□□□ -0.78
TCOF1-214ENST00000515035 IGHV3-30-5P0DP03 117 aa10.15□□□□□ -0.78
TCOF1-214ENST00000515035 CACNA1AO00555 2505 aa10.15□□□□□ -0.78
TCOF1-214ENST00000515035 ZNF80P51504 273 aaPredicted RBP10.15□□□□□ -0.79
TCOF1-214ENST00000515035 TIRAPP58753 221 aa10.15□□□□□ -0.79
TCOF1-214ENST00000515035 SPAG11BQ08648 103 aa10.15□□□□□ -0.79
TCOF1-214ENST00000515035 MDFICQ9P1T7 246 aa10.14□□□□□ -0.79
TCOF1-214ENST00000515035 TP53TG3Q9ULZ0 132 aa10.14□□□□□ -0.79
TCOF1-214ENST00000515035 IGHV4-61A0A0C4DH41 118 aa10.14□□□□□ -0.79
TCOF1-214ENST00000515035 SONP18583 2426 aaKnown RBP10.14□□□□□ -0.79
TCOF1-214ENST00000515035 COL4A3Q01955 1670 aa10.14□□□□□ -0.79
TCOF1-214ENST00000515035 IGKV1D-37A0A075B6S9 117 aa10.14□□□□□ -0.79
TCOF1-214ENST00000515035 P0C879 139 aa10.14□□□□□ -0.79
TCOF1-214ENST00000515035 SEM1Q6ZVN7 128 aa10.14□□□□□ -0.79
TCOF1-214ENST00000515035 MYO18BQ8IUG5 2567 aa10.14□□□□□ -0.79
TCOF1-214ENST00000515035 ESM1Q9NQ30 184 aa10.13□□□□□ -0.79
TCOF1-214ENST00000515035 LTBP2Q14767 1821 aa10.13□□□□□ -0.79
TCOF1-214ENST00000515035 IGLV1-47P01700 117 aa10.13□□□□□ -0.79
TCOF1-214ENST00000515035 YPEL4Q96NS1 127 aa10.13□□□□□ -0.79
TCOF1-214ENST00000515035 BPY2O14599 106 aa10.13□□□□□ -0.79
TCOF1-214ENST00000515035 MLST8Q9BVC4 326 aa10.13□□□□□ -0.79
TCOF1-214ENST00000515035 FAM240AA0A1B0GVK7 77 aa10.13□□□□□ -0.79
TCOF1-214ENST00000515035 MBD6Q96DN6 1003 aa10.13□□□□□ -0.79
TCOF1-214ENST00000515035 CUL9Q8IWT3 2517 aa10.12□□□□□ -0.79
TCOF1-214ENST00000515035 IGHV4-30-2A0A087WSY4 118 aa10.12□□□□□ -0.79
TCOF1-214ENST00000515035 C10orf105Q8TEF2 133 aa10.12□□□□□ -0.79
TCOF1-214ENST00000515035 K7EMT4 169 aa10.12□□□□□ -0.79
TCOF1-214ENST00000515035 CSPG4Q6UVK1 2322 aa10.12□□□□□ -0.79
TCOF1-214ENST00000515035 C5orf56Q8N8D9 126 aa10.11□□□□□ -0.79
TCOF1-214ENST00000515035 NEXN-AS1Q8NBZ9 246 aa10.11□□□□□ -0.79
TCOF1-214ENST00000515035 IGHV4-38-2P0DP08 117 aa10.11□□□□□ -0.79
TCOF1-214ENST00000515035 FBXL19-AS1Q494R0 122 aa10.11□□□□□ -0.79
TCOF1-214ENST00000515035 MAPKAPK5-AS1Q8N8E1 139 aa10.11□□□□□ -0.79
TCOF1-214ENST00000515035 HHLA3Q9XRX5 114 aa10.11□□□□□ -0.79
TCOF1-214ENST00000515035 ANKHD1Q8IWZ3 2542 aaKnown RBP10.11□□□□□ -0.79
TCOF1-214ENST00000515035 SPART-AS1P0CW21 52 aa10.1□□□□□ -0.79
TCOF1-214ENST00000515035 COX7BP24311 80 aa10.1□□□□□ -0.79
TCOF1-214ENST00000515035 ZNF295-AS1Q8N0V1 137 aa10.1□□□□□ -0.79
TCOF1-214ENST00000515035 PRR14LQ5THK1 2151 aa10.1□□□□□ -0.79
TCOF1-214ENST00000515035 TNRC6BQ9UPQ9 1833 aaKnown RBP10.1□□□□□ -0.79
TCOF1-214ENST00000515035 NDUFC2-KCTD14E9PQ53 114 aa10.1□□□□□ -0.79
TCOF1-214ENST00000515035 FANCD2OSQ96PS1 177 aa10.1□□□□□ -0.79
TCOF1-214ENST00000515035 TRIAP1O43715 76 aa10.1□□□□□ -0.79
TCOF1-214ENST00000515035 ATP5EP2Q5VTU8 51 aa10.1□□□□□ -0.79
TCOF1-214ENST00000515035 NCOA6Q14686 2063 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-214ENST00000515035 NCKAP5O14513 1909 aa10.1□□□□□ -0.79
TCOF1-214ENST00000515035 IGHV4OR15-8A0A075B7B6 117 aa10.09□□□□□ -0.79
TCOF1-214ENST00000515035 A0A087WW49 117 aa10.09□□□□□ -0.79
TCOF1-214ENST00000515035 ENHOQ6UWT2 76 aa10.09□□□□□ -0.79
TCOF1-214ENST00000515035 PRORYQ9H606 182 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms