RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 SLC25A2Q9BXI2 301 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 MIXL1Q9H2W2 232 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 PRSS47A8MTI9 375 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 LINC00310P59036 64 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 ZNF674Q2M3X9 581 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 SMIM4Q8WVI0 70 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 SMIM3Q9BZL3 60 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 VCX3AQ9NNX9 186 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 ANAPC11Q9NYG5 84 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 MBPP02686 304 aaPredicted RBP1.86□□□□□ -2.11
CHD1-211ENST00000514344 GZMBP10144 247 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 GABARAPL2P60520 117 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 RPL18AQ02543 176 aaKnown RBP1.86□□□□□ -2.11
CHD1-211ENST00000514344 NHLH2Q02577 135 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 ZFP69Q49AA0 526 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 PYDC2Q56P42 97 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 TMEM14EPQ6UXP3 125 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 C12orf45Q8N5I9 185 aaPredicted RBP1.86□□□□□ -2.11
CHD1-211ENST00000514344 DYNC2LI1Q8TCX1 351 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 SCGB3A2Q96PL1 93 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 DERL1Q9BUN8 251 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 TPPP3Q9BW30 176 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 TMEM14CQ9P0S9 112 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 LENEPQ9Y5L5 61 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 TRBV25-1A0A075B6N4 114 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 GVQW2A0A096LPI5 108 aaPredicted RBP1.85□□□□□ -2.11
CHD1-211ENST00000514344 RBAKDNA6NC62 111 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 RHODO00212 210 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 SFT2D2O95562 160 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 ARMS2P0C7Q2 107 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 XCL1P47992 114 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 EIF5AL1Q6IS14 154 aaKnown RBP1.85□□□□□ -2.11
CHD1-211ENST00000514344 TOMM5Q8N4H5 51 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.85□□□□□ -2.11
CHD1-211ENST00000514344 AP3S1Q92572 193 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 FXYD5Q96DB9 178 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 VCX3BQ9H321 246 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 TRBV10-1A0A0K0K1A3 114 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 ANKRD20A5PA0PJZ0 165 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 FAM168BA1KXE4 195 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 PKIAP61925 76 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 LINC00304Q8N9R0 145 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 NEXN-AS1Q8NBZ9 246 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 OR5C1Q8NGR4 320 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 FAM167A-AS1Q96KT0 104 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 NDFIP1Q9BT67 221 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 NPCDR1Q9BY65 106 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 MBD2Q9UBB5 411 aa1.85□□□□□ -2.11
CHD1-211ENST00000514344 CARHSP1Q9Y2V2 147 aaKnown RBP1.85□□□□□ -2.11
CHD1-211ENST00000514344 IGSF23A1L1A6 192 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 C9orf170A2RU37 121 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 TSHBP01222 138 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 MGPP08493 103 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 UBE2BP63146 152 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 SS18Q15532 418 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 KRTAP20-1Q3LI63 56 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 RNASEKQ6P5S7 137 aaKnown RBP1.84□□□□□ -2.11
CHD1-211ENST00000514344 STX12Q86Y82 276 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 SMIM8Q96KF7 97 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 SLIRPQ9GZT3 109 aaKnown RBP1.84□□□□□ -2.11
CHD1-211ENST00000514344 Q9H521 79 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 WDR83OSQ9Y284 106 aa1.84□□□□□ -2.11
CHD1-211ENST00000514344 NEBP20929 6669 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 IGKV3D-20A0A0C4DH25 116 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 LOC107984640A0A0U1RRK4 108 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 B4DEV8 164 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 FNDC10F2Z333 226 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 UBE2G2P60604 165 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 SYCNQ0VAF6 134 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 KRTAP13-3Q3SY46 172 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 FAM19A5Q7Z5A7 132 aaPredicted RBP1.84□□□□□ -2.12
CHD1-211ENST00000514344 CHCHD10Q8WYQ3 142 aaPredicted RBP1.84□□□□□ -2.12
CHD1-211ENST00000514344 OR5AC2Q9NZP5 309 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 RAB26Q9ULW5 256 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 PKIGQ9Y2B9 76 aa1.84□□□□□ -2.12
CHD1-211ENST00000514344 TRBV6-1A0A0K0K1D8 114 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 FGF6P10767 208 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 FAUP35544 74 aaKnown RBP1.83□□□□□ -2.12
CHD1-211ENST00000514344 RPL29P47914 159 aaKnown RBP1.83□□□□□ -2.12
CHD1-211ENST00000514344 RAB32Q13637 225 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 SMUG1Q53HV7 270 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 TMEM252Q8N6L7 170 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 OR11H4Q8NGC9 324 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 TSKUQ8WUA8 353 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 PTH2Q96A98 100 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 DUXBA0A1W2PPF3 345 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 A0A1W2PPV4 95 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 UBE2L6O14933 153 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 SIX6O95475 246 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 NKX2-5P52952 324 aaPredicted RBP1.83□□□□□ -2.12
CHD1-211ENST00000514344 HBG1P69891 147 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 HBG2P69892 147 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 KRTAP13-2Q52LG2 175 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 FAM74A1Q5RGS3 127 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 COX6B2Q6YFQ2 88 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 MITD1Q8WV92 249 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 TMED6Q8WW62 240 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 AQP10Q96PS8 301 aa1.83□□□□□ -2.12
CHD1-211ENST00000514344 PSG8Q9UQ74 426 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms