RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 KNCNA6PVL3 124 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 ELANEP08246 267 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 CTSGP08311 255 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 ZNF80P51504 273 aaPredicted RBP8.66□□□□□ -1.02
TCOF1-211ENST00000513346 SPINK13Q1W4C9 94 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 IGHV4-30-2A0A087WSY4 118 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 A0A1B0GX51 115 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 ATP5G1P05496 136 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 HOXB4P17483 251 aaPredicted RBP8.66□□□□□ -1.02
TCOF1-211ENST00000513346 KIAA1549Q9HCM3 1950 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 IGHV4-59P01825 116 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
TCOF1-211ENST00000513346 C6orf226Q5I0X4 101 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 KLK9Q9UKQ9 250 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 BUB3O43684 328 aa8.65□□□□□ -1.02
TCOF1-211ENST00000513346 CRIP1P50238 77 aa8.65□□□□□ -1.02
TCOF1-211ENST00000513346 RBMY1FQ15415 496 aaKnown RBP8.65□□□□□ -1.02
TCOF1-211ENST00000513346 IGFBPL1Q8WX77 278 aa8.65□□□□□ -1.02
TCOF1-211ENST00000513346 JPT2Q9H910 190 aa8.65□□□□□ -1.02
TCOF1-211ENST00000513346 CEP192Q8TEP8 1941 aa8.65□□□□□ -1.02
TCOF1-211ENST00000513346 SUMO4Q6EEV6 95 aa8.65□□□□□ -1.02
TCOF1-211ENST00000513346 CHD9Q3L8U1 2897 aa8.65□□□□□ -1.02
TCOF1-211ENST00000513346 LINC00643Q86TS7 51 aa8.65□□□□□ -1.03
TCOF1-211ENST00000513346 ZNF843Q8N446 348 aa8.65□□□□□ -1.03
TCOF1-211ENST00000513346 NCKAP5O14513 1909 aa8.65□□□□□ -1.03
TCOF1-211ENST00000513346 ATG2AQ2TAZ0 1938 aa8.65□□□□□ -1.03
TCOF1-211ENST00000513346 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.03
TCOF1-211ENST00000513346 HCFC1P51610 2035 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 TEX49A0A1B0GTD5 131 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 VPREB3Q9UKI3 123 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 LGALS9O00182 355 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 HERVK_113P63121 156 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 SLC25A29Q8N8R3 303 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 NEXN-AS1Q8NBZ9 246 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 CLEC2BQ92478 149 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 LINC00574Q9H8X3 128 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 CENPEQ02224 2701 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 EML5Q05BV3 1969 aa8.64□□□□□ -1.03
TCOF1-211ENST00000513346 CENPVL3A0A0U1RRI6 287 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 UBE2DNLQ8IWF7 75 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 XIRP2A4UGR9 3374 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 UQCRQO14949 82 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 IGLV2-11P01706 119 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 C9orf47Q6ZRZ4 202 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 RPL32P62910 135 aaKnown RBP8.63□□□□□ -1.03
TCOF1-211ENST00000513346 Q9H8V8 135 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 A0A0J9YY99 117 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 F6UB75 175 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 C5orf47Q569G3 176 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 NPBQ8NG41 125 aa8.63□□□□□ -1.03
TCOF1-211ENST00000513346 TRAV12-2A0A075B6T6 113 aa8.62□□□□□ -1.03
TCOF1-211ENST00000513346 RNF185Q96GF1 192 aa8.62□□□□□ -1.03
TCOF1-211ENST00000513346 C10orf105Q8TEF2 133 aa8.62□□□□□ -1.03
TCOF1-211ENST00000513346 CCDC179H3BU77 68 aa8.62□□□□□ -1.03
TCOF1-211ENST00000513346 TRBV7-3A0A075B6L6 115 aa8.61□□□□□ -1.03
TCOF1-211ENST00000513346 IGHV4-38-2P0DP08 117 aa8.61□□□□□ -1.03
TCOF1-211ENST00000513346 MED14OSP0DP75 135 aa8.61□□□□□ -1.03
TCOF1-211ENST00000513346 IGHV7-4-1A0A0J9YVY3 117 aa8.61□□□□□ -1.03
TCOF1-211ENST00000513346 H3BUA1 57 aa8.61□□□□□ -1.03
TCOF1-211ENST00000513346 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
TCOF1-211ENST00000513346 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
TCOF1-211ENST00000513346 HAMPP81172 84 aa8.61□□□□□ -1.03
TCOF1-211ENST00000513346 C1orf43Q9BWL3 253 aa8.61□□□□□ -1.03
TCOF1-211ENST00000513346 IGLV1-47P01700 117 aa8.61□□□□□ -1.03
TCOF1-211ENST00000513346 C2CD3Q4AC94 2353 aa8.6□□□□□ -1.03
TCOF1-211ENST00000513346 TRAV4A0A0B4J268 109 aa8.6□□□□□ -1.03
TCOF1-211ENST00000513346 TRIOO75962 3097 aa8.6□□□□□ -1.03
TCOF1-211ENST00000513346 P0DMU3 169 aa8.6□□□□□ -1.03
TCOF1-211ENST00000513346 FAM231AP0DMU4 169 aa8.6□□□□□ -1.03
TCOF1-211ENST00000513346 FAM231CP0DMU5 169 aa8.6□□□□□ -1.03
TCOF1-211ENST00000513346 PFN2P35080 140 aa8.6□□□□□ -1.03
TCOF1-211ENST00000513346 HHLA3Q9XRX5 114 aa8.6□□□□□ -1.03
TCOF1-211ENST00000513346 LRRC75A-AS1Q8N1F1 130 aa8.6□□□□□ -1.03
TCOF1-211ENST00000513346 IGHV3-33P01772 117 aa8.6□□□□□ -1.03
TCOF1-211ENST00000513346 RBM3P98179 157 aaKnown RBP8.59□□□□□ -1.03
TCOF1-211ENST00000513346 IGHV3-16A0A0C4DH30 117 aa8.59□□□□□ -1.03
TCOF1-211ENST00000513346 BLCAPP62952 87 aa8.59□□□□□ -1.03
TCOF1-211ENST00000513346 C22orf34Q6ZV56 151 aa8.59□□□□□ -1.03
TCOF1-211ENST00000513346 C3orf22Q8N5N4 141 aa8.59□□□□□ -1.03
TCOF1-211ENST00000513346 TMEM243Q9BU79 118 aa8.59□□□□□ -1.03
TCOF1-211ENST00000513346 IGHV7-81A0A0B4J1V7 117 aa8.59□□□□□ -1.03
TCOF1-211ENST00000513346 ZNRF2Q8NHG8 242 aa8.58□□□□□ -1.04
TCOF1-211ENST00000513346 CFHR3Q02985 330 aa8.58□□□□□ -1.04
TCOF1-211ENST00000513346 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
TCOF1-211ENST00000513346 H0YGX0 51 aa8.58□□□□□ -1.04
TCOF1-211ENST00000513346 HOXD3P31249 432 aaPredicted RBP8.58□□□□□ -1.04
TCOF1-211ENST00000513346 F5H768 121 aa8.58□□□□□ -1.04
TCOF1-211ENST00000513346 CRYGBP07316 175 aa8.58□□□□□ -1.04
TCOF1-211ENST00000513346 IGHV3-30-3P0DP02 117 aa8.58□□□□□ -1.04
TCOF1-211ENST00000513346 DAD1P61803 113 aa8.58□□□□□ -1.04
TCOF1-211ENST00000513346 CDH23Q9H251 3354 aa8.58□□□□□ -1.04
TCOF1-211ENST00000513346 SORL1Q92673 2214 aa8.57□□□□□ -1.04
TCOF1-211ENST00000513346 Q6Q795 121 aa8.57□□□□□ -1.04
TCOF1-211ENST00000513346 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
TCOF1-211ENST00000513346 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
TCOF1-211ENST00000513346 SZT2Q5T011 3432 aa8.57□□□□□ -1.04
TCOF1-211ENST00000513346 IGHV1-58A0A0C4DH39 117 aa8.57□□□□□ -1.04
TCOF1-211ENST00000513346 A0A0J9YXY3 114 aa8.57□□□□□ -1.04
TCOF1-211ENST00000513346 TRBV30A0A0K0K1B3 111 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 395.2 ms