RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 ATP5LO75964 103 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 HLA-DRB4P13762 266 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 G0S2P27469 103 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 HNRNPA3P51991 378 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 CMC4P56277 68 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 LINC01547P58512 204 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 DEFB1P60022 68 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 NUTF2P61970 127 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 LAGE3Q14657 143 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 DEFB114Q30KQ6 69 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 ORMDL2Q53FV1 153 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 AMTNQ6UX39 209 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 ADAMTSL5Q6ZMM2 481 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 ATOH7Q8N100 152 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 KLHL30-AS1Q8NEE0 82 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 SVIPQ8NHG7 77 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 PTH2Q96A98 100 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 SPAG8Q99932 426 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 LINC00467Q9BRT7 94 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 HLA-DRB4X5D2U9 266 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 TENM4Q6N022 2769 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 SPG11Q96JI7 2443 aa3.19□□□□□ -1.9
UBE2D3-230ENST00000510599 ZNF469Q96JG9 3925 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 IGHV1OR15-1A0A075B7D0 117 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 IGHV3-16A0A0C4DH30 117 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 TRBV6-5A0A0K0K1A5 114 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 H3BMM0 161 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 J3KRW8 73 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 DLEU1O43261 78 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 NDUFA7O95182 113 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 CD7P09564 240 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 SMIM17P0DL12 118 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 COX8AP10176 69 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 GATA1P15976 413 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 TFPI2P48307 235 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 LINC00315P59091 139 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 MAJINQ3KP22 176 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 Q6ZN92 141 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 C14orf178Q8N769 122 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 TMEM158Q8WZ71 300 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 RASL10AQ92737 203 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 DLX4Q92988 240 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 LITAFQ99732 161 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 SMIM2Q9BVW6 85 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 EDA2RQ9HAV5 297 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 ESM1Q9NQ30 184 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 YAE1D1Q9NRH1 226 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 GOLT1BQ9Y3E0 138 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 TSSC4Q9Y5U2 329 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 DOPEY2Q9Y3R5 2298 aa3.18□□□□□ -1.9
UBE2D3-230ENST00000510599 ZANQ9Y493 2812 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 AKAP9Q99996 3911 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 TRAV26-2A0A0B4J265 109 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 A0A1B0GV90 55 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 VCYO14598 125 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 TCAPO15273 167 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 SIVA1O15304 175 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 POLR2KP53803 58 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 SPINK13Q1W4C9 94 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 DEFB136Q30KP8 78 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 COL5A1-AS1Q5SY13 56 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 SLC25A34Q6PIV7 304 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 TMEM61Q8N0U2 210 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 DYNLRB2Q8TF09 96 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 ZNF418Q8TF45 676 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 TOMM6Q96B49 74 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 ZNF256Q9Y2P7 627 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 TIMM8BQ9Y5J9 83 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 ITPR3Q14573 2671 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 USP9YO00507 2555 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 MAP1AP78559 2803 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 NBPF19A0A087WUL8 3843 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 FAM208BQ5VWN6 2430 aa3.17□□□□□ -1.9
UBE2D3-230ENST00000510599 CENPEQ02224 2701 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 ANK3Q12955 4377 aaKnown RBP3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 TRAV12-2A0A075B6T6 113 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 A0A087WX48 190 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 TRBV27A0A0K0K1C4 114 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 CBY3A6NI87 242 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 H0Y8G0 127 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 CCL24O00175 119 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 DPM2O94777 84 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 CRYGDP07320 174 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 MGPP08493 103 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 CD28P10747 220 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 RIPPLY3P57055 190 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 FXYD7P58549 80 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 DEFB131AP59861 70 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 ZNF876PQ49A33 203 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 ZC2HC1BQ5TFG8 222 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 C12orf54Q6X4T0 127 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 TRPT1Q86TN4 253 aaKnown RBP3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 BOD1L2Q8IYS8 172 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 LINC01006Q8NI28 216 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 RPL39LQ96EH5 51 aaKnown RBP3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 C18orf15Q96N68 181 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 FAM110AQ9BQ89 295 aa3.16□□□□□ -1.9
UBE2D3-230ENST00000510599 SPXQ9BT56 116 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms