RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RBMY1FQ15415 496 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-228ENST00000509552 Q5PR19 223 aa13.19□□□□□ -0.3
CCHCR1-228ENST00000509552 NFE4Q86UQ8 179 aa13.19□□□□□ -0.3
CCHCR1-228ENST00000509552 Q8N2B8 174 aa13.19□□□□□ -0.3
CCHCR1-228ENST00000509552 A0A0J9YY99 117 aa13.18□□□□□ -0.3
CCHCR1-228ENST00000509552 H3BMG7 143 aa13.18□□□□□ -0.3
CCHCR1-228ENST00000509552 H3BMM0 161 aa13.18□□□□□ -0.3
CCHCR1-228ENST00000509552 DEFB113Q30KQ7 82 aa13.18□□□□□ -0.3
CCHCR1-228ENST00000509552 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-228ENST00000509552 PGPEP1Q9NXJ5 209 aa13.18□□□□□ -0.3
CCHCR1-228ENST00000509552 ZANQ9Y493 2812 aa13.18□□□□□ -0.3
CCHCR1-228ENST00000509552 SORL1Q92673 2214 aa13.18□□□□□ -0.3
CCHCR1-228ENST00000509552 DUX3Q96PT4 197 aa13.18□□□□□ -0.3
CCHCR1-228ENST00000509552 A8MTW9 85 aa13.17□□□□□ -0.3
CCHCR1-228ENST00000509552 LGALS3P17931 250 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-228ENST00000509552 OPRPNQ99935 248 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-228ENST00000509552 EDA2RQ9HAV5 297 aa13.17□□□□□ -0.3
CCHCR1-228ENST00000509552 J3QQQ9 107 aa13.17□□□□□ -0.3
CCHCR1-228ENST00000509552 KRTAP10-9P60411 292 aa13.17□□□□□ -0.3
CCHCR1-228ENST00000509552 CREBBPQ92793 2442 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 FBN2P35556 2912 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 UBE2D1P51668 147 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 TSPEAR-AS2P59090 65 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 KHDC1LQ5JSQ8 128 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 LRRC75A-AS1Q8N1F1 130 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 C4orf3Q8WVX3 66 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 VCX2Q9H322 139 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 SPANXB1Q9NS25 103 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 TEX48A0A1B0GUV7 120 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 TMEM61Q8N0U2 210 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 DYNLRB2Q8TF09 96 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 CR1P17927 2039 aa13.16□□□□□ -0.3
CCHCR1-228ENST00000509552 ZNF462Q96JM2 2506 aa13.15□□□□□ -0.3
CCHCR1-228ENST00000509552 IGHV3-73A0A0B4J1V6 119 aa13.15□□□□□ -0.3
CCHCR1-228ENST00000509552 A8MWV9 139 aa13.15□□□□□ -0.3
CCHCR1-228ENST00000509552 COTL1Q14019 142 aa13.15□□□□□ -0.3
CCHCR1-228ENST00000509552 GAGE13Q4V321 117 aa13.15□□□□□ -0.3
CCHCR1-228ENST00000509552 M0R2P5 195 aa13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 ZNF415Q09FC8 603 aa13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 SLC25A29Q8N8R3 303 aa13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 SPAG8Q99932 426 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 LRRK2Q5S007 2527 aa13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 TMEM223A0PJW6 202 aa13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 LEPROTO15243 131 aa13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 WFDC2Q14508 124 aa13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 Q96MF0 132 aa13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 BBC3Q96PG8 261 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 TNFRSF18Q9Y5U5 241 aa13.14□□□□□ -0.31
CCHCR1-228ENST00000509552 IGLV4-3A0A075B6K6 122 aa13.13□□□□□ -0.31
CCHCR1-228ENST00000509552 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-228ENST00000509552 RBMY1EA6NEQ0 496 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-228ENST00000509552 RBMY1DP0C7P1 496 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-228ENST00000509552 PIK3CD-AS1Q5SR53 167 aa13.13□□□□□ -0.31
CCHCR1-228ENST00000509552 MXRA5Q9NR99 2828 aa13.13□□□□□ -0.31
CCHCR1-228ENST00000509552 CENPEQ02224 2701 aa13.13□□□□□ -0.31
CCHCR1-228ENST00000509552 APOMO95445 188 aa13.13□□□□□ -0.31
CCHCR1-228ENST00000509552 PRRC2AP48634 2157 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-228ENST00000509552 RAX2Q96IS3 184 aa13.12□□□□□ -0.31
CCHCR1-228ENST00000509552 MAP6D1Q9H9H5 199 aa13.12□□□□□ -0.31
CCHCR1-228ENST00000509552 RHODO00212 210 aa13.12□□□□□ -0.31
CCHCR1-228ENST00000509552 IGHV3-30P01768 117 aa13.12□□□□□ -0.31
CCHCR1-228ENST00000509552 IGHV3-30-5P0DP03 117 aa13.12□□□□□ -0.31
CCHCR1-228ENST00000509552 DLX4Q92988 240 aaPredicted RBP13.12□□□□□ -0.31
CCHCR1-228ENST00000509552 AMELXQ99217 191 aa13.12□□□□□ -0.31
CCHCR1-228ENST00000509552 PYGO1Q9Y3Y4 419 aa13.12□□□□□ -0.31
CCHCR1-228ENST00000509552 ZNF22P17026 224 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-228ENST00000509552 PROK1P58294 105 aa13.11□□□□□ -0.31
CCHCR1-228ENST00000509552 ZNF843Q8N446 348 aa13.11□□□□□ -0.31
CCHCR1-228ENST00000509552 J3QR89 54 aa13.11□□□□□ -0.31
CCHCR1-228ENST00000509552 TSPAN13O95857 204 aa13.11□□□□□ -0.31
CCHCR1-228ENST00000509552 CD28P10747 220 aa13.11□□□□□ -0.31
CCHCR1-228ENST00000509552 NDUFA11Q86Y39 141 aa13.11□□□□□ -0.31
CCHCR1-228ENST00000509552 PTH2Q96A98 100 aa13.11□□□□□ -0.31
CCHCR1-228ENST00000509552 ZFYVE26Q68DK2 2539 aa13.1□□□□□ -0.31
CCHCR1-228ENST00000509552 PTPN13Q12923 2485 aa13.1□□□□□ -0.31
CCHCR1-228ENST00000509552 NAV2Q8IVL1 2488 aa13.1□□□□□ -0.31
CCHCR1-228ENST00000509552 A0A0J9YXV3 536 aa13.1□□□□□ -0.31
CCHCR1-228ENST00000509552 LYRM7Q5U5X0 104 aa13.1□□□□□ -0.31
CCHCR1-228ENST00000509552 LINC01587Q99440 93 aa13.1□□□□□ -0.31
CCHCR1-228ENST00000509552 LOC107984156A0A0G2JMH3 177 aa13.1□□□□□ -0.31
CCHCR1-228ENST00000509552 ARL17AQ8IVW1 177 aa13.1□□□□□ -0.31
CCHCR1-228ENST00000509552 PRM2P04554 102 aa13.09□□□□□ -0.31
CCHCR1-228ENST00000509552 DEFB114Q30KQ6 69 aa13.09□□□□□ -0.31
CCHCR1-228ENST00000509552 USP24Q9UPU5 2620 aa13.09□□□□□ -0.31
CCHCR1-228ENST00000509552 CRYBA4P53673 196 aa13.08□□□□□ -0.31
CCHCR1-228ENST00000509552 ETDBQ3ZM63 59 aa13.08□□□□□ -0.31
CCHCR1-228ENST00000509552 LINC00467Q9BRT7 94 aa13.08□□□□□ -0.31
CCHCR1-228ENST00000509552 PRO0461Q9UI25 63 aa13.08□□□□□ -0.31
CCHCR1-228ENST00000509552 UBR5O95071 2799 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-228ENST00000509552 INSP01308 110 aa13.08□□□□□ -0.32
CCHCR1-228ENST00000509552 IGHV3-64A0A075B6Q5 118 aa13.07□□□□□ -0.32
CCHCR1-228ENST00000509552 CFAP126Q5VTH2 177 aa13.07□□□□□ -0.32
CCHCR1-228ENST00000509552 TMEM86BQ8N661 226 aa13.07□□□□□ -0.32
CCHCR1-228ENST00000509552 SPXQ9BT56 116 aa13.07□□□□□ -0.32
CCHCR1-228ENST00000509552 CFC1BP0CG36 223 aa13.07□□□□□ -0.32
CCHCR1-228ENST00000509552 CFC1P0CG37 223 aa13.07□□□□□ -0.32
CCHCR1-228ENST00000509552 SH2D6Q7Z4S9 175 aa13.07□□□□□ -0.32
CCHCR1-228ENST00000509552 MTURNQ8N3F0 131 aa13.07□□□□□ -0.32
CCHCR1-228ENST00000509552 PSMB2P49721 201 aa13.06□□□□□ -0.32
CCHCR1-228ENST00000509552 UBE2D3P61077 147 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms