RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 DAZ4Q86SG3 579 aaKnown RBP10.25□□□□□ -0.77
RNF4-210ENST00000508235 WFDC10BQ8IUB3 73 aa10.25□□□□□ -0.77
RNF4-210ENST00000508235 DAZ3Q9NR90 486 aaKnown RBP10.25□□□□□ -0.77
RNF4-210ENST00000508235 TMEM97Q5BJF2 176 aa10.24□□□□□ -0.77
RNF4-210ENST00000508235 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
RNF4-210ENST00000508235 COMMD7Q86VX2 200 aa10.24□□□□□ -0.77
RNF4-210ENST00000508235 C6orf223Q8N319 242 aa10.24□□□□□ -0.77
RNF4-210ENST00000508235 C10orf126Q8N4M7 172 aa10.24□□□□□ -0.77
RNF4-210ENST00000508235 NUP35Q8NFH5 326 aa10.24□□□□□ -0.77
RNF4-210ENST00000508235 FRZBQ92765 325 aa10.24□□□□□ -0.77
RNF4-210ENST00000508235 RYR3Q15413 4870 aa10.23□□□□□ -0.77
RNF4-210ENST00000508235 SACSQ9NZJ4 4579 aa10.23□□□□□ -0.77
RNF4-210ENST00000508235 TMEM218A2RU14 115 aa10.23□□□□□ -0.77
RNF4-210ENST00000508235 LINC00862A6NCI5 91 aa10.23□□□□□ -0.77
RNF4-210ENST00000508235 MT-ND4LP03901 98 aa10.23□□□□□ -0.77
RNF4-210ENST00000508235 ANAPC16Q96DE5 110 aa10.23□□□□□ -0.77
RNF4-210ENST00000508235 A0A1B0GW15 77 aa10.22□□□□□ -0.77
RNF4-210ENST00000508235 F8W036 122 aa10.22□□□□□ -0.77
RNF4-210ENST00000508235 LINC01556Q5JQF7 62 aa10.22□□□□□ -0.77
RNF4-210ENST00000508235 TMEM191AQ9H0A3 160 aa10.22□□□□□ -0.77
RNF4-210ENST00000508235 NIT2Q9NQR4 276 aa10.22□□□□□ -0.77
RNF4-210ENST00000508235 HYDINQ4G0P3 5121 aa10.22□□□□□ -0.77
RNF4-210ENST00000508235 S100A8P05109 93 aa10.21□□□□□ -0.77
RNF4-210ENST00000508235 SEC11CQ9BY50 192 aa10.21□□□□□ -0.77
RNF4-210ENST00000508235 RTL8CO15255 209 aa10.2□□□□□ -0.78
RNF4-210ENST00000508235 KCNIP4Q6PIL6 250 aa10.2□□□□□ -0.78
RNF4-210ENST00000508235 KRTAP1-5Q9BYS1 174 aa10.2□□□□□ -0.78
RNF4-210ENST00000508235 URGCP-MRPS24S4R325 110 aa10.2□□□□□ -0.78
RNF4-210ENST00000508235 DNAH1Q9P2D7 4330 aa10.19□□□□□ -0.78
RNF4-210ENST00000508235 TRBV6-8A0A0A6YYG3 113 aa10.19□□□□□ -0.78
RNF4-210ENST00000508235 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
RNF4-210ENST00000508235 GATD1Q8NB37 220 aa10.19□□□□□ -0.78
RNF4-210ENST00000508235 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
RNF4-210ENST00000508235 PRSS29PA6NIE9 313 aa10.18□□□□□ -0.78
RNF4-210ENST00000508235 ADCYAP1P18509 176 aa10.18□□□□□ -0.78
RNF4-210ENST00000508235 PKIAP61925 76 aa10.18□□□□□ -0.78
RNF4-210ENST00000508235 MRAP2Q96G30 205 aa10.18□□□□□ -0.78
RNF4-210ENST00000508235 CHCHD7Q9BUK0 85 aa10.18□□□□□ -0.78
RNF4-210ENST00000508235 IGHV3-30P01768 117 aa10.17□□□□□ -0.78
RNF4-210ENST00000508235 IGHV3-33P01772 117 aa10.17□□□□□ -0.78
RNF4-210ENST00000508235 IGHV3-30-3P0DP02 117 aa10.17□□□□□ -0.78
RNF4-210ENST00000508235 IGHV3-30-5P0DP03 117 aa10.17□□□□□ -0.78
RNF4-210ENST00000508235 HBBP68871 147 aa10.17□□□□□ -0.78
RNF4-210ENST00000508235 ATP5L2Q7Z4Y8 100 aa10.17□□□□□ -0.78
RNF4-210ENST00000508235 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
RNF4-210ENST00000508235 PPP1R17O96001 155 aa10.16□□□□□ -0.78
RNF4-210ENST00000508235 RAB4AP20338 218 aa10.16□□□□□ -0.78
RNF4-210ENST00000508235 CAMPP49913 170 aa10.16□□□□□ -0.78
RNF4-210ENST00000508235 NIT1Q86X76 327 aa10.16□□□□□ -0.78
RNF4-210ENST00000508235 AMN1Q8IY45 258 aa10.16□□□□□ -0.78
RNF4-210ENST00000508235 CTDSP1Q9GZU7 261 aa10.16□□□□□ -0.78
RNF4-210ENST00000508235 VPS13DQ5THJ4 4388 aa10.15□□□□□ -0.78
RNF4-210ENST00000508235 A0A087WX48 190 aa10.15□□□□□ -0.78
RNF4-210ENST00000508235 IGHV1-24A0A0C4DH33 117 aa10.15□□□□□ -0.78
RNF4-210ENST00000508235 IBA57-AS1B1ANH7 110 aa10.15□□□□□ -0.78
RNF4-210ENST00000508235 LAGE3Q14657 143 aa10.15□□□□□ -0.78
RNF4-210ENST00000508235 ELOBQ15370 118 aa10.15□□□□□ -0.78
RNF4-210ENST00000508235 MRPL54Q6P161 138 aaKnown RBP10.15□□□□□ -0.78
RNF4-210ENST00000508235 RNF185Q96GF1 192 aa10.15□□□□□ -0.78
RNF4-210ENST00000508235 IMMP2LQ96T52 175 aa10.15□□□□□ -0.78
RNF4-210ENST00000508235 TRBV6-5A0A0K0K1A5 114 aa10.14□□□□□ -0.79
RNF4-210ENST00000508235 A0A1B0GXF2 115 aa10.14□□□□□ -0.79
RNF4-210ENST00000508235 COTL1Q14019 142 aa10.14□□□□□ -0.79
RNF4-210ENST00000508235 IQCJQ1A5X6 159 aa10.14□□□□□ -0.79
RNF4-210ENST00000508235 C10orf91Q5T1B1 145 aa10.14□□□□□ -0.79
RNF4-210ENST00000508235 FAM104BQ5XKR9 115 aa10.14□□□□□ -0.79
RNF4-210ENST00000508235 NTM-AS1Q6ZSK4 140 aa10.14□□□□□ -0.79
RNF4-210ENST00000508235 RPL39LQ96EH5 51 aaKnown RBP10.14□□□□□ -0.79
RNF4-210ENST00000508235 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
RNF4-210ENST00000508235 TMEM262E9PQX1 116 aa10.13□□□□□ -0.79
RNF4-210ENST00000508235 BTF3L4Q96K17 158 aa10.13□□□□□ -0.79
RNF4-210ENST00000508235 ST20Q9HBF5 79 aa10.13□□□□□ -0.79
RNF4-210ENST00000508235 CARHSP1Q9Y2V2 147 aaKnown RBP10.13□□□□□ -0.79
RNF4-210ENST00000508235 KMT2AQ03164 3969 aa10.13□□□□□ -0.79
RNF4-210ENST00000508235 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
RNF4-210ENST00000508235 SDHAF1A6NFY7 115 aa10.12□□□□□ -0.79
RNF4-210ENST00000508235 NCR2O95944 276 aa10.12□□□□□ -0.79
RNF4-210ENST00000508235 TMEM243Q9BU79 118 aa10.12□□□□□ -0.79
RNF4-210ENST00000508235 I3L3M4 83 aa10.11□□□□□ -0.79
RNF4-210ENST00000508235 AMTP48728 403 aa10.11□□□□□ -0.79
RNF4-210ENST00000508235 TNP2Q05952 138 aa10.11□□□□□ -0.79
RNF4-210ENST00000508235 RHEBQ15382 184 aa10.11□□□□□ -0.79
RNF4-210ENST00000508235 NDUFA5Q16718 116 aa10.11□□□□□ -0.79
RNF4-210ENST00000508235 TMEM242Q9NWH2 141 aa10.11□□□□□ -0.79
RNF4-210ENST00000508235 TRAV9-1A0A075B6T8 112 aa10.1□□□□□ -0.79
RNF4-210ENST00000508235 UBE2L6O14933 153 aa10.1□□□□□ -0.79
RNF4-210ENST00000508235 PPBPP02775 128 aa10.1□□□□□ -0.79
RNF4-210ENST00000508235 PMCHP20382 165 aa10.1□□□□□ -0.79
RNF4-210ENST00000508235 S100PP25815 95 aa10.1□□□□□ -0.79
RNF4-210ENST00000508235 CKS2P33552 79 aa10.1□□□□□ -0.79
RNF4-210ENST00000508235 MRPL51Q4U2R6 128 aaKnown RBP10.1□□□□□ -0.79
RNF4-210ENST00000508235 Q6ZRN7 208 aaPredicted RBP10.1□□□□□ -0.79
RNF4-210ENST00000508235 PSCAO43653 123 aa10.09□□□□□ -0.79
RNF4-210ENST00000508235 Q0VG73 95 aa10.09□□□□□ -0.79
RNF4-210ENST00000508235 MPV17L2Q567V2 206 aa10.09□□□□□ -0.79
RNF4-210ENST00000508235 Q8N3U1 123 aa10.09□□□□□ -0.79
RNF4-210ENST00000508235 CLRN3Q8NCR9 226 aa10.09□□□□□ -0.79
RNF4-210ENST00000508235 RMI2Q96E14 147 aa10.09□□□□□ -0.79
RNF4-210ENST00000508235 TMEM70Q9BUB7 260 aa10.09□□□□□ -0.79
RNF4-210ENST00000508235 TM2D2Q9BX73 214 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms