RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ZMAT5Q9UDW3 170 aaKnown RBP12.59□□□□□ -0.39
TRAPPC11-204ENST00000505676 ZC2HC1BQ5TFG8 222 aa12.58□□□□□ -0.39
TRAPPC11-204ENST00000505676 TP53TG1Q9Y2A0 90 aa12.58□□□□□ -0.39
TRAPPC11-204ENST00000505676 IGIPA6NJ69 53 aa12.58□□□□□ -0.4
TRAPPC11-204ENST00000505676 NPSP0C0P6 89 aa12.58□□□□□ -0.4
TRAPPC11-204ENST00000505676 C2orf91Q6ZV80 131 aa12.58□□□□□ -0.4
TRAPPC11-204ENST00000505676 IL17DQ8TAD2 202 aa12.58□□□□□ -0.4
TRAPPC11-204ENST00000505676 HIGD1BQ9P298 99 aa12.58□□□□□ -0.4
TRAPPC11-204ENST00000505676 RS1O15537 224 aa12.57□□□□□ -0.4
TRAPPC11-204ENST00000505676 NMUP48645 174 aa12.57□□□□□ -0.4
TRAPPC11-204ENST00000505676 INSL3P51460 131 aa12.57□□□□□ -0.4
TRAPPC11-204ENST00000505676 HIST2H2BDQ6DRA6 164 aa12.57□□□□□ -0.4
TRAPPC11-204ENST00000505676 PF4P02776 101 aa12.57□□□□□ -0.4
TRAPPC11-204ENST00000505676 SEC11AP67812 179 aa12.57□□□□□ -0.4
TRAPPC11-204ENST00000505676 BVES-AS1Q5T3Y7 98 aa12.57□□□□□ -0.4
TRAPPC11-204ENST00000505676 CFAP126Q5VTH2 177 aa12.57□□□□□ -0.4
TRAPPC11-204ENST00000505676 TMEM263Q8WUH6 116 aaKnown RBP12.57□□□□□ -0.4
TRAPPC11-204ENST00000505676 XCL2Q9UBD3 114 aa12.57□□□□□ -0.4
TRAPPC11-204ENST00000505676 HSD52Q0P140 79 aa12.56□□□□□ -0.4
TRAPPC11-204ENST00000505676 PMVKQ15126 192 aa12.56□□□□□ -0.4
TRAPPC11-204ENST00000505676 MPV17L2Q567V2 206 aa12.56□□□□□ -0.4
TRAPPC11-204ENST00000505676 C1orf158Q8N1D5 194 aa12.56□□□□□ -0.4
TRAPPC11-204ENST00000505676 CIDEAO60543 219 aa12.56□□□□□ -0.4
TRAPPC11-204ENST00000505676 TNFRSF18Q9Y5U5 241 aa12.56□□□□□ -0.4
TRAPPC11-204ENST00000505676 HIVEP2P31629 2446 aa12.55□□□□□ -0.4
TRAPPC11-204ENST00000505676 NBPF19A0A087WUL8 3843 aa12.55□□□□□ -0.4
TRAPPC11-204ENST00000505676 IGHV3-53P01767 116 aa12.55□□□□□ -0.4
TRAPPC11-204ENST00000505676 PRSS29PA6NIE9 313 aa12.54□□□□□ -0.4
TRAPPC11-204ENST00000505676 TSHBP01222 138 aa12.54□□□□□ -0.4
TRAPPC11-204ENST00000505676 CRYBA4P53673 196 aa12.54□□□□□ -0.4
TRAPPC11-204ENST00000505676 GAGE1Q13065 139 aa12.54□□□□□ -0.4
TRAPPC11-204ENST00000505676 NEGR1Q7Z3B1 354 aa12.54□□□□□ -0.4
TRAPPC11-204ENST00000505676 LINC00482Q8N8I6 264 aa12.54□□□□□ -0.4
TRAPPC11-204ENST00000505676 C19orf73Q9NVV2 129 aa12.54□□□□□ -0.4
TRAPPC11-204ENST00000505676 ZNF469Q96JG9 3925 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC11-204ENST00000505676 RNASE8Q8TDE3 154 aaKnown RBP12.54□□□□□ -0.4
TRAPPC11-204ENST00000505676 INAFM1C9JVW0 142 aa12.53□□□□□ -0.4
TRAPPC11-204ENST00000505676 C20orf203Q8NBC4 194 aa12.53□□□□□ -0.4
TRAPPC11-204ENST00000505676 GTSCR1Q86UQ5 136 aa12.53□□□□□ -0.4
TRAPPC11-204ENST00000505676 ORAOV1Q8WV07 137 aa12.53□□□□□ -0.4
TRAPPC11-204ENST00000505676 C16orf74Q96GX8 76 aa12.53□□□□□ -0.4
TRAPPC11-204ENST00000505676 PYGO1Q9Y3Y4 419 aa12.53□□□□□ -0.4
TRAPPC11-204ENST00000505676 DAZ2Q13117 558 aaKnown RBP12.52□□□□□ -0.41
TRAPPC11-204ENST00000505676 LINC00469Q8N7U9 141 aa12.52□□□□□ -0.41
TRAPPC11-204ENST00000505676 SORL1Q92673 2214 aa12.52□□□□□ -0.41
TRAPPC11-204ENST00000505676 HERVK_113P61574 105 aa12.52□□□□□ -0.41
TRAPPC11-204ENST00000505676 ANK3Q12955 4377 aaKnown RBP12.51□□□□□ -0.41
TRAPPC11-204ENST00000505676 CRLF1O75462 422 aa12.51□□□□□ -0.41
TRAPPC11-204ENST00000505676 PCP2Q8IVA1 136 aa12.51□□□□□ -0.41
TRAPPC11-204ENST00000505676 CST9LQ9H4G1 147 aa12.51□□□□□ -0.41
TRAPPC11-204ENST00000505676 E9PLD3 99 aa12.5□□□□□ -0.41
TRAPPC11-204ENST00000505676 OR11H2Q8NH07 326 aa12.5□□□□□ -0.41
TRAPPC11-204ENST00000505676 MRPL16Q9NX20 251 aaKnown RBP12.5□□□□□ -0.41
TRAPPC11-204ENST00000505676 TRBV10-1A0A0K0K1A3 114 aa12.5□□□□□ -0.41
TRAPPC11-204ENST00000505676 A6NDN8 102 aa12.5□□□□□ -0.41
TRAPPC11-204ENST00000505676 AZU1P20160 251 aa12.5□□□□□ -0.41
TRAPPC11-204ENST00000505676 KRTAP10-3P60369 221 aa12.5□□□□□ -0.41
TRAPPC11-204ENST00000505676 ITPR2Q14571 2701 aa12.49□□□□□ -0.41
TRAPPC11-204ENST00000505676 IGKV2D-26A0A0A0MRZ7 120 aa12.49□□□□□ -0.41
TRAPPC11-204ENST00000505676 TRAV4A0A0B4J268 109 aa12.49□□□□□ -0.41
TRAPPC11-204ENST00000505676 ZNF25P17030 456 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC11-204ENST00000505676 TAL2Q16559 108 aa12.49□□□□□ -0.41
TRAPPC11-204ENST00000505676 C9orf66Q5T8R8 295 aa12.49□□□□□ -0.41
TRAPPC11-204ENST00000505676 TP73-AS1Q9UF72 201 aa12.49□□□□□ -0.41
TRAPPC11-204ENST00000505676 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
TRAPPC11-204ENST00000505676 ACANP16112 2415 aa12.49□□□□□ -0.41
TRAPPC11-204ENST00000505676 OR4C5Q8NGB2 326 aa12.49□□□□□ -0.41
TRAPPC11-204ENST00000505676 P0DMU3 169 aa12.48□□□□□ -0.41
TRAPPC11-204ENST00000505676 FAM231AP0DMU4 169 aa12.48□□□□□ -0.41
TRAPPC11-204ENST00000505676 FAM231CP0DMU5 169 aa12.48□□□□□ -0.41
TRAPPC11-204ENST00000505676 RPL39P62891 51 aaKnown RBP12.48□□□□□ -0.41
TRAPPC11-204ENST00000505676 SPANXA1Q9NS26 97 aa12.47□□□□□ -0.41
TRAPPC11-204ENST00000505676 FASNP49327 2511 aaKnown RBP12.47□□□□□ -0.41
TRAPPC11-204ENST00000505676 IGHV3OR16-12A0A075B7B8 117 aa12.47□□□□□ -0.41
TRAPPC11-204ENST00000505676 C11orf86A6NJI1 115 aa12.47□□□□□ -0.41
TRAPPC11-204ENST00000505676 GIG44P09565 113 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC11-204ENST00000505676 NFE4Q86UQ8 179 aa12.47□□□□□ -0.41
TRAPPC11-204ENST00000505676 AKAP9Q99996 3911 aa12.47□□□□□ -0.41
TRAPPC11-204ENST00000505676 TRGV1A0A0A0MS02 117 aa12.46□□□□□ -0.41
TRAPPC11-204ENST00000505676 IGHV3-73A0A0B4J1V6 119 aa12.46□□□□□ -0.41
TRAPPC11-204ENST00000505676 IGLV4-69A0A075B6H9 119 aa12.46□□□□□ -0.42
TRAPPC11-204ENST00000505676 TRBV25-1A0A075B6N4 114 aa12.46□□□□□ -0.42
TRAPPC11-204ENST00000505676 OVOL2Q9BRP0 275 aa12.46□□□□□ -0.42
TRAPPC11-204ENST00000505676 PRM2P04554 102 aa12.45□□□□□ -0.42
TRAPPC11-204ENST00000505676 COTL1Q14019 142 aa12.45□□□□□ -0.42
TRAPPC11-204ENST00000505676 RRN3P1Q2M238 152 aa12.45□□□□□ -0.42
TRAPPC11-204ENST00000505676 CSNK1G2-AS1Q8NCQ2 148 aa12.45□□□□□ -0.42
TRAPPC11-204ENST00000505676 CHAC1Q9BUX1 264 aa12.45□□□□□ -0.42
TRAPPC11-204ENST00000505676 MYMXA0A1B0GTQ4 84 aa12.44□□□□□ -0.42
TRAPPC11-204ENST00000505676 SMAGPQ0VAQ4 97 aa12.44□□□□□ -0.42
TRAPPC11-204ENST00000505676 VCX2Q9H322 139 aa12.44□□□□□ -0.42
TRAPPC11-204ENST00000505676 TRAV8-6A0A0B4J262 113 aa12.43□□□□□ -0.42
TRAPPC11-204ENST00000505676 RPL35AP18077 110 aaKnown RBP12.43□□□□□ -0.42
TRAPPC11-204ENST00000505676 IGLV4-3A0A075B6K6 122 aa12.43□□□□□ -0.42
TRAPPC11-204ENST00000505676 TCTAP57738 103 aa12.43□□□□□ -0.42
TRAPPC11-204ENST00000505676 RPL36AP83881 106 aaKnown RBP12.43□□□□□ -0.42
TRAPPC11-204ENST00000505676 RPL36ALQ969Q0 106 aaKnown RBP12.43□□□□□ -0.42
TRAPPC11-204ENST00000505676 TIMM21Q9BVV7 248 aa12.43□□□□□ -0.42
TRAPPC11-204ENST00000505676 K7EQD1 137 aa12.42□□□□□ -0.42
TRAPPC11-204ENST00000505676 TAX1BP3O14907 124 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms