RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 FRAS1Q86XX4 4008 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 LYRM9A8MSI8 78 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 SERF1AO75920 110 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 DEFB130BP0DP73 79 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 DEFB130AP0DP74 79 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 PDZD11Q5EBL8 140 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 FAM222AQ5U5X8 452 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 SBSPONQ8IVN8 264 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 NRACQ8N912 160 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 RPL39LQ96EH5 51 aaKnown RBP6.66□□□□□ -1.34
TPM3-218ENST00000505010 ZNF479Q96JC4 524 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 SPATA25Q9BR10 227 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 LAMTOR2Q9Y2Q5 125 aa6.66□□□□□ -1.34
TPM3-218ENST00000505010 H7C1H1 209 aa6.65□□□□□ -1.34
TPM3-218ENST00000505010 COA6Q5JTJ3 125 aaKnown RBP6.65□□□□□ -1.34
TPM3-218ENST00000505010 UFSP1Q6NVU6 142 aa6.65□□□□□ -1.34
TPM3-218ENST00000505010 ZFP2Q6ZN57 461 aa6.65□□□□□ -1.34
TPM3-218ENST00000505010 LINC00612Q8N6U2 182 aa6.65□□□□□ -1.34
TPM3-218ENST00000505010 ZMAT4Q9H898 229 aa6.65□□□□□ -1.34
TPM3-218ENST00000505010 DKK2Q9UBU2 259 aa6.65□□□□□ -1.34
TPM3-218ENST00000505010 C5orf52A6NGY3 159 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 M0QY20 66 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 PPP1R17O96001 155 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 PMCHP20382 165 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 LINC00310P59036 64 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 Q6ZSN1 163 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 FA2HQ7L5A8 372 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 NIT1Q86X76 327 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 PRSS3P2Q8NHM4 247 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 ST20Q9HBF5 79 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 CELA1Q9UNI1 258 aa6.64□□□□□ -1.35
TPM3-218ENST00000505010 TRGV4A0A0C4DH28 118 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 HSBP1O75506 76 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 SPART-AS1P0CW21 52 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 P0DMU3 169 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 FAM231AP0DMU4 169 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 FAM231CP0DMU5 169 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 HOXA5P20719 270 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 S100A2P29034 98 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 IFI27P40305 119 aaPredicted RBP6.63□□□□□ -1.35
TPM3-218ENST00000505010 DAD1P61803 113 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 SUMO2P61956 95 aaKnown RBP6.63□□□□□ -1.35
TPM3-218ENST00000505010 HIST3H2BBQ8N257 126 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 C20orf78Q9BR46 151 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 TM2D3Q9BRN9 247 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 SMIM2Q9BVW6 85 aa6.63□□□□□ -1.35
TPM3-218ENST00000505010 C11orf68Q9H3H3 251 aaKnown RBP6.63□□□□□ -1.35
TPM3-218ENST00000505010 TEX48A0A1B0GUV7 120 aa6.62□□□□□ -1.35
TPM3-218ENST00000505010 K7EQD1 137 aa6.62□□□□□ -1.35
TPM3-218ENST00000505010 NUPR1O60356 82 aa6.62□□□□□ -1.35
TPM3-218ENST00000505010 NEGR1Q7Z3B1 354 aa6.62□□□□□ -1.35
TPM3-218ENST00000505010 Q8N8P6 123 aa6.62□□□□□ -1.35
TPM3-218ENST00000505010 CHCHD1Q96BP2 118 aaKnown RBP6.62□□□□□ -1.35
TPM3-218ENST00000505010 URB1-AS1Q96HZ7 61 aa6.62□□□□□ -1.35
TPM3-218ENST00000505010 C18orf15Q96N68 181 aa6.62□□□□□ -1.35
TPM3-218ENST00000505010 EDA2RQ9HAV5 297 aa6.62□□□□□ -1.35
TPM3-218ENST00000505010 NXT2Q9NPJ8 142 aaKnown RBP6.62□□□□□ -1.35
TPM3-218ENST00000505010 NIT2Q9NQR4 276 aa6.62□□□□□ -1.35
TPM3-218ENST00000505010 A0A0J9YWU9 116 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 TRBV6-5A0A0K0K1A5 114 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 CIDEAO60543 219 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 LINC00614P0C842 121 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 ESDP10768 282 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 AMTP48728 403 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 FHL2Q14192 279 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 PMCHL1Q16048 86 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 NEXN-AS1Q8NBZ9 246 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 TMEM70Q9BUB7 260 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 AP5S1Q9NUS5 200 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 TNFRSF18Q9Y5U5 241 aa6.61□□□□□ -1.35
TPM3-218ENST00000505010 IGHV1-24A0A0C4DH33 117 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 LOC105371267A0A1B0GV96 52 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 SDHAF1A6NFY7 115 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 ATP5G1P05496 136 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 FABP4P15090 132 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 HTN3P15516 51 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 RHOHQ15669 191 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 FAM19A2Q8N3H0 131 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 SLC25A29Q8N8R3 303 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 TMEM18Q96B42 140 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 DNAJC30Q96LL9 226 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 ALMS1Q8TCU4 4167 aa6.6□□□□□ -1.35
TPM3-218ENST00000505010 IGLV2-18A0A075B6J9 118 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 TRBV10-1A0A0K0K1A3 114 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 TRBV6-4A0A1B0GX49 114 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 GAGE12JA6NER3 117 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 IFITM10A6NMD0 228 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 PRSS47A8MTI9 375 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 VCYO14598 125 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 TCAPO15273 167 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 RPL32P62910 135 aaKnown RBP6.59□□□□□ -1.35
TPM3-218ENST00000505010 GAGE1Q13065 139 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 GAGE4Q13068 117 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 GAGE5Q13069 117 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 GAGE13Q4V321 117 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 DEFB104AQ8WTQ1 72 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 HIST1H2BLQ99880 126 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 Q9UF83 564 aa6.59□□□□□ -1.35
TPM3-218ENST00000505010 LOC100131303A0A0U1RQF7 123 aa6.58□□□□□ -1.36
TPM3-218ENST00000505010 F5H768 121 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms