RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 LAMTOR2Q9Y2Q5 125 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 LOC389332A0A1B0GUA5 103 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 GAGE12BA1L429 117 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 DEFB4AO15263 64 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 GAGE7O76087 117 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 GAGE12FP0CL80 117 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 GAGE12GP0CL81 117 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 GAGE12IP0CL82 117 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 SMIM17P0DL12 118 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 P0DMU3 169 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 FAM231AP0DMU4 169 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 FAM231CP0DMU5 169 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 FABP4P15090 132 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 EMP1P54849 157 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 ZNF56Q15929 161 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 KRTAP21-3Q3LHN1 58 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 FAM19A2Q8N3H0 131 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 ZMAT5Q9UDW3 170 aaKnown RBP4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 CELA1Q9UNI1 258 aa4.9□□□□□ -1.63
TOPBP1-203ENST00000503464 TRAV4A0A0B4J268 109 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 IGHV1-24A0A0C4DH33 117 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 TRBV6-5A0A0K0K1A5 114 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 F5H697 171 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 RHODO00212 210 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 IGHV3-53P01767 116 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 LINC00614P0C842 121 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 MIFP14174 115 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 PMCHP20382 165 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 SUMO2P61956 95 aaKnown RBP4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 FAM222AQ5U5X8 452 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 ZFP2Q6ZN57 461 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 LINC00173Q6ZV60 143 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 NEGR1Q7Z3B1 354 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 SBSPONQ8IVN8 264 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 CHCHD1Q96BP2 118 aaKnown RBP4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 SMIM2Q9BVW6 85 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 MAP1LC3AQ9H492 121 aa4.89□□□□□ -1.63
TOPBP1-203ENST00000503464 AMTP48728 403 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 POLR2KP53803 58 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 RPL32P62910 135 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 Q8N8P6 123 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 OR4C5Q8NGB2 326 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 OR10D4PQ8NGN7 298 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 PRSS3P2Q8NHM4 247 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 PACRGQ96M98 296 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 C18orf15Q96N68 181 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 C20orf78Q9BR46 151 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 TMEM70Q9BUB7 260 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 AP5S1Q9NUS5 200 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 DKK2Q9UBU2 259 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 TP53TG1Q9Y2A0 90 aa4.88□□□□□ -1.63
TOPBP1-203ENST00000503464 TRBV27A0A0K0K1C4 114 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 SDHAF1A6NFY7 115 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 LYRM9A8MSI8 78 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 TCAPO15273 167 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 HSBP1O75506 76 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 DEFB130BP0DP73 79 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 DEFB130AP0DP74 79 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 S100A2P29034 98 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 FHL2Q14192 279 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 FA2HQ7L5A8 372 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 SPATA12Q7Z6I5 190 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 Q8N976 141 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 NEXN-AS1Q8NBZ9 246 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 DEFB104AQ8WTQ1 72 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 TMEM18Q96B42 140 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 TM2D3Q9BRN9 247 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 ST20Q9HBF5 79 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 NXT2Q9NPJ8 142 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 NIT2Q9NQR4 276 aa4.87□□□□□ -1.63
TOPBP1-203ENST00000503464 PRKDCP78527 4128 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-203ENST00000503464 TRGV2A0A075B6R0 118 aa4.86□□□□□ -1.63
TOPBP1-203ENST00000503464 LOC100131303A0A0U1RQF7 123 aa4.86□□□□□ -1.63
TOPBP1-203ENST00000503464 K7EQD1 137 aa4.86□□□□□ -1.63
TOPBP1-203ENST00000503464 TSHBP01222 138 aa4.86□□□□□ -1.63
TOPBP1-203ENST00000503464 LINC00694P0DN24 101 aa4.86□□□□□ -1.63
TOPBP1-203ENST00000503464 AKR1D1P51857 326 aa4.86□□□□□ -1.63
TOPBP1-203ENST00000503464 CDPF1Q6NVV7 123 aa4.86□□□□□ -1.63
TOPBP1-203ENST00000503464 SLC25A29Q8N8R3 303 aa4.86□□□□□ -1.63
TOPBP1-203ENST00000503464 H7C1H1 209 aa4.85□□□□□ -1.63
TOPBP1-203ENST00000503464 PPP1R17O96001 155 aa4.85□□□□□ -1.63
TOPBP1-203ENST00000503464 PYY3Q5JQD4 70 aa4.85□□□□□ -1.63
TOPBP1-203ENST00000503464 C11orf68Q9H3H3 251 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-203ENST00000503464 TRBV10-1A0A0K0K1A3 114 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 TRBV6-4A0A1B0GX49 114 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 VCYO14598 125 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 CIDEAO60543 219 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 HBDP02042 147 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 C3orf79P0CE67 100 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 SPART-AS1P0CW21 52 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 FCER1GP30273 86 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 UBE2D3P61077 147 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 UBE2D2P62837 147 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 LAGE3Q14657 143 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 C12orf74Q32Q52 190 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 MRAPQ8TCY5 172 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 DNAJC30Q96LL9 226 aa4.84□□□□□ -1.63
TOPBP1-203ENST00000503464 TRGV4A0A0C4DH28 118 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 IGHV3-38A0A0C4DH36 116 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 A0A0J9YWU9 116 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms