RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 FGF7P21781 194 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 ZNF93P35789 620 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-224ENST00000497488 TFF3Q07654 80 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 POP5Q969H6 163 aaKnown RBP3.47□□□□□ -1.85
BRCA1-224ENST00000497488 DPY30Q9C005 99 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 FKBP11Q9NYL4 201 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 LY96Q9Y6Y9 160 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 ARID1AO14497 2285 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 DOPEY2Q9Y3R5 2298 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 HECTD1Q9ULT8 2610 aa3.47□□□□□ -1.85
BRCA1-224ENST00000497488 NCOA6Q14686 2063 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-224ENST00000497488 HIVEP3Q5T1R4 2406 aa3.46□□□□□ -1.85
BRCA1-224ENST00000497488 CSMD2Q7Z408 3487 aa3.46□□□□□ -1.85
BRCA1-224ENST00000497488 POLEQ07864 2286 aa3.46□□□□□ -1.85
BRCA1-224ENST00000497488 CNTRLQ7Z7A1 2325 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 IGLV3-32A0A0A0MS00 114 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 G3V3Q6 166 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 LYRM1O43325 122 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 IGLV1-51P01701 117 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 SLC25A4P12235 298 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 S100A3P33764 101 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 DSCR4P56555 118 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-224ENST00000497488 ROMO1P60602 79 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 BLCAPP62952 87 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 ZNF345Q14585 488 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 ZNF826PQ6ZT77 177 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 C10orf111Q8N326 155 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 CST9LQ9H4G1 147 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 PSORS1C2Q9UIG4 136 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 SMAD5-AS1Q9Y6J3 95 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 ZGRF1Q86YA3 2104 aa3.46□□□□□ -1.86
BRCA1-224ENST00000497488 SETXQ7Z333 2677 aaKnown RBP3.46□□□□□ -1.86
BRCA1-224ENST00000497488 NBPF19A0A087WUL8 3843 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 ICE1Q9Y2F5 2266 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 DOPEY1Q5JWR5 2465 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 USP9YO00507 2555 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-224ENST00000497488 UQCRHLA0A096LP55 91 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 HMSDA8MTL9 139 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 BBIP1A8MTZ0 92 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 B4DSR2 109 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 HMGN4O00479 90 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 EDF1O60869 148 aaKnown RBP3.45□□□□□ -1.86
BRCA1-224ENST00000497488 PMP2P02689 132 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 S100A8P05109 93 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 AKAIN1P0CW23 69 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 SAA1P0DJI8 122 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-224ENST00000497488 MGST1P10620 155 aaKnown RBP3.45□□□□□ -1.86
BRCA1-224ENST00000497488 POLR2JP52435 117 aaKnown RBP3.45□□□□□ -1.86
BRCA1-224ENST00000497488 SS18Q15532 418 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 LY6EQ16553 131 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 MEIG1Q5JSS6 88 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 CRYBG3Q68DQ2 2970 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 Q8N814 137 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 PP6455Q8WZ26 134 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 CLEC2BQ92478 149 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 C20orf166-AS1Q96NR2 134 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 SLC35B3Q9H1N7 401 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 TPRKBQ9Y3C4 175 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 PTPN13Q12923 2485 aa3.45□□□□□ -1.86
BRCA1-224ENST00000497488 LRRK2Q5S007 2527 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 CELSR2Q9HCU4 2923 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 MED12Q93074 2177 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 NINQ8N4C6 2090 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 IGLV2-18A0A075B6J9 118 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 C17orf112F2Z3M2 114 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 M0R129 80 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 COX6B1P14854 86 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 PYDC2Q56P42 97 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 CLLU1Q5K131 121 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 SPANXN5Q5MJ07 72 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 OR8B3Q8NGG8 313 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 DPH3Q96FX2 82 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 C14orf132Q9NPU4 83 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 LSM2Q9Y333 95 aaKnown RBP3.44□□□□□ -1.86
BRCA1-224ENST00000497488 HEATR5AQ86XA9 2040 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 MALRD1Q5VYJ5 2156 aa3.44□□□□□ -1.86
BRCA1-224ENST00000497488 DCHS2Q6V1P9 2916 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 TRBV20-1A0A075B6N2 111 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 TMSB15BA0A087X1C1 80 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 IGKV2D-26A0A0A0MRZ7 120 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 MUC21A0A0G2JKD1 596 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 A0A0G2JND7 137 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 MUC21A0A140T8X8 626 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 LOC107986453A0A1B0GWG9 222 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 CD3DP04234 171 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 CD14P08571 375 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 PYYP10082 97 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 TMEM258P61165 79 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 ATOH7Q8N100 152 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 HYLS1Q96M11 299 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 CIB3Q96Q77 187 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-224ENST00000497488 NABP2Q9BQ15 211 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 WFDC6Q9BQY6 131 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 Q9BRP9 147 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 METTL1Q9UBP6 276 aaKnown RBP3.43□□□□□ -1.86
BRCA1-224ENST00000497488 PRR14LQ5THK1 2151 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 FLNBO75369 2602 aaKnown RBP3.43□□□□□ -1.86
BRCA1-224ENST00000497488 MYO7BQ6PIF6 2116 aa3.43□□□□□ -1.86
BRCA1-224ENST00000497488 CSMD1Q96PZ7 3565 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 IGKV2-28A0A075B6P5 120 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 354.4 ms