RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ZFP2Q6ZN57 461 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 KIR2DL5AQ8N109 375 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 C1orf158Q8N1D5 194 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 C11orf72Q8NBR9 251 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 KIR2DL5BQ8NHK3 375 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 IFI27L1Q96BM0 104 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 DNAH9Q9NYC9 4486 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 STAB2Q8WWQ8 2551 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 IGLV2-18A0A075B6J9 118 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 SPRY2O43597 315 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 AZU1P20160 251 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 LINC00315P59091 139 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 MRAPQ8TCY5 172 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 DNAJC30Q96LL9 226 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 JPT2Q9H910 190 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 TNFRSF18Q9Y5U5 241 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 NBEAL2Q6ZNJ1 2754 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 COL7A1Q02388 2944 aa7.44□□□□□ -1.22
HDAC3-214ENST00000495485 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-214ENST00000495485 RS1O15537 224 aa7.43□□□□□ -1.22
HDAC3-214ENST00000495485 DAZ2Q13117 558 aaKnown RBP7.43□□□□□ -1.22
HDAC3-214ENST00000495485 LGALS9CQ6DKI2 356 aa7.43□□□□□ -1.22
HDAC3-214ENST00000495485 ZNF705AQ6ZN79 300 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-214ENST00000495485 OR4C5Q8NGB2 326 aa7.43□□□□□ -1.22
HDAC3-214ENST00000495485 RNASE8Q8TDE3 154 aaKnown RBP7.43□□□□□ -1.22
HDAC3-214ENST00000495485 TRAV9-2A0A087WT02 112 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 TRGV1A0A0A0MS02 117 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 TRAV4A0A0B4J268 109 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 TRBV27A0A0K0K1C4 114 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 SDHAF1A6NFY7 115 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 M0QY20 66 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 PRSS1P07477 247 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 POLR2KP53803 58 aaKnown RBP7.42□□□□□ -1.22
HDAC3-214ENST00000495485 RHOHQ15669 191 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 CFAP126Q5VTH2 177 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 Q6ZN92 141 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 ZNF664Q8N3J9 261 aa7.42□□□□□ -1.22
HDAC3-214ENST00000495485 RPL39LQ96EH5 51 aaKnown RBP7.42□□□□□ -1.22
HDAC3-214ENST00000495485 H0Y8G0 127 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 I3L3M4 83 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 K7EIL1 84 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 GAS8-AS1O95177 125 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 NHLRC4P0CG21 123 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-214ENST00000495485 LINC01545Q5VT33 79 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 CSNK1G2-AS1Q8NCQ2 148 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 IL17DQ8TAD2 202 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 TOMM6Q96B49 74 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 SCGB3A1Q96QR1 104 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 B9D2Q9BPU9 175 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 OVOL2Q9BRP0 275 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 WFDC10AQ9H1F0 79 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 MRPL16Q9NX20 251 aaKnown RBP7.41□□□□□ -1.22
HDAC3-214ENST00000495485 CYSLTR1Q9Y271 337 aa7.41□□□□□ -1.22
HDAC3-214ENST00000495485 A0A096LNJ9 63 aa7.4□□□□□ -1.22
HDAC3-214ENST00000495485 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.22
HDAC3-214ENST00000495485 SMAGPQ0VAQ4 97 aa7.4□□□□□ -1.22
HDAC3-214ENST00000495485 SPATA45Q537H7 98 aa7.4□□□□□ -1.22
HDAC3-214ENST00000495485 PAPPA-AS1Q5QFB9 102 aa7.4□□□□□ -1.22
HDAC3-214ENST00000495485 C2orf66Q6UXQ4 117 aa7.4□□□□□ -1.22
HDAC3-214ENST00000495485 PAM16Q9Y3D7 125 aa7.4□□□□□ -1.22
HDAC3-214ENST00000495485 TRGV2A0A075B6R0 118 aa7.39□□□□□ -1.23
HDAC3-214ENST00000495485 GIG44P09565 113 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-214ENST00000495485 DDTP30046 118 aa7.39□□□□□ -1.23
HDAC3-214ENST00000495485 DEFB121Q5J5C9 76 aa7.39□□□□□ -1.23
HDAC3-214ENST00000495485 UFSP1Q6NVU6 142 aa7.39□□□□□ -1.23
HDAC3-214ENST00000495485 CDPF1Q6NVV7 123 aa7.39□□□□□ -1.23
HDAC3-214ENST00000495485 ERASQ7Z444 233 aa7.39□□□□□ -1.23
HDAC3-214ENST00000495485 Q8N976 141 aa7.39□□□□□ -1.23
HDAC3-214ENST00000495485 TMEM141Q96I45 108 aa7.39□□□□□ -1.23
HDAC3-214ENST00000495485 PRO1933Q9H354 126 aa7.39□□□□□ -1.23
HDAC3-214ENST00000495485 NOP10Q9NPE3 64 aaKnown RBP7.39□□□□□ -1.23
HDAC3-214ENST00000495485 IGHV4-30-4P0DP06 118 aa7.38□□□□□ -1.23
HDAC3-214ENST00000495485 RPL36AP83881 106 aaKnown RBP7.38□□□□□ -1.23
HDAC3-214ENST00000495485 LINC00173Q6ZV60 143 aa7.38□□□□□ -1.23
HDAC3-214ENST00000495485 RPL36ALQ969Q0 106 aaKnown RBP7.38□□□□□ -1.23
HDAC3-214ENST00000495485 C18orf15Q96N68 181 aa7.38□□□□□ -1.23
HDAC3-214ENST00000495485 IGHV3-73A0A0B4J1V6 119 aa7.37□□□□□ -1.23
HDAC3-214ENST00000495485 TRAV12-1A0A0B4J245 112 aa7.37□□□□□ -1.23
HDAC3-214ENST00000495485 NPSP0C0P6 89 aa7.37□□□□□ -1.23
HDAC3-214ENST00000495485 TIMM17AQ99595 171 aa7.37□□□□□ -1.23
HDAC3-214ENST00000495485 PMCHL2Q9BQD1 86 aa7.37□□□□□ -1.23
HDAC3-214ENST00000495485 MIEN1Q9BRT3 115 aa7.37□□□□□ -1.23
HDAC3-214ENST00000495485 UQCR10Q9UDW1 63 aa7.37□□□□□ -1.23
HDAC3-214ENST00000495485 TRGV4A0A0C4DH28 118 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 LYRM9A8MSI8 78 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 K7EQD1 137 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 DPM2O94777 84 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 IGKCP01834 107 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 PRM2P04554 102 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 MIFP14174 115 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 PLNP26678 52 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 COTL1Q14019 142 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 Q6ZTI0 123 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 PRADC1Q9BSG0 188 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 HUWE1Q7Z6Z7 4374 aaKnown RBP7.36□□□□□ -1.23
HDAC3-214ENST00000495485 DNAH7Q8WXX0 4024 aa7.36□□□□□ -1.23
HDAC3-214ENST00000495485 TENM3Q9P273 2699 aa7.35□□□□□ -1.23
HDAC3-214ENST00000495485 TRBV7-3A0A075B6L6 115 aa7.35□□□□□ -1.23
HDAC3-214ENST00000495485 A0A087WX48 190 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms