RNA–Protein interactions for RNA: ENST00000494504.5

KATNA1-208, Transcript of katanin catalytic subunit A1, human

TSL 5

Gene KATNA1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KATNA1-208	ENST00000494504	FAM167A-AS1	Q96KT0	104 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	PRRT1	Q99946	306 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	MCUB	Q9NWR8	336 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	TRAV8-4	A0A0B4J246	113 aa		4.11	□□□□□ -1.75
KATNA1-208	ENST00000494504		P01737	135 aa		4.11	□□□□□ -1.75
KATNA1-208	ENST00000494504	AKAIN1	P0CW23	69 aa		4.11	□□□□□ -1.75
KATNA1-208	ENST00000494504	NEDD8	Q15843	81 aa		4.11	□□□□□ -1.75
KATNA1-208	ENST00000494504	NTM-AS1	Q6ZSK4	140 aa		4.11	□□□□□ -1.75
KATNA1-208	ENST00000494504	GOLT1A	Q6ZVE7	132 aa		4.11	□□□□□ -1.75
KATNA1-208	ENST00000494504	FXYD5	Q96DB9	178 aa		4.11	□□□□□ -1.75
KATNA1-208	ENST00000494504	SCGB3A2	Q96PL1	93 aa		4.11	□□□□□ -1.75
KATNA1-208	ENST00000494504	EXTL2	Q9UBQ6	330 aa		4.11	□□□□□ -1.75
KATNA1-208	ENST00000494504	RAB26	Q9ULW5	256 aa		4.11	□□□□□ -1.75
KATNA1-208	ENST00000494504		A4D1N5	150 aa		4.1	□□□□□ -1.75
KATNA1-208	ENST00000494504	EIF3G	O75821	320 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
KATNA1-208	ENST00000494504	GZMB	P10144	247 aa		4.1	□□□□□ -1.75
KATNA1-208	ENST00000494504	BAX	Q07812	192 aa		4.1	□□□□□ -1.75
KATNA1-208	ENST00000494504	C9orf116	Q5BN46	136 aa	Predicted RBP	4.1	□□□□□ -1.75
KATNA1-208	ENST00000494504	KRTAP11-1	Q8IUC1	163 aa		4.1	□□□□□ -1.75
KATNA1-208	ENST00000494504	C20orf203	Q8NBC4	194 aa		4.1	□□□□□ -1.75
KATNA1-208	ENST00000494504	SLIRP	Q9GZT3	109 aa	Known RBP	4.1	□□□□□ -1.75
KATNA1-208	ENST00000494504	PHLDA3	Q9Y5J5	127 aa		4.1	□□□□□ -1.75
KATNA1-208	ENST00000494504	IGLV4-60	A0A075B6I1	120 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	PIGBOS1	A0A0B4J2F0	54 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	TRBV10-1	A0A0K0K1A3	114 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	UBE2L5P	A0A1B0GUS4	154 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	CST7	O76096	145 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	GCG	P01275	180 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	RPL29	P47914	159 aa	Known RBP	4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	SULT1A2	P50226	295 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	GABARAPL2	P60520	117 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	SNRPE	P62304	92 aa	Known RBP	4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	ASB16-AS1	Q495Z4	193 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	KRTAP5-1	Q6L8H4	278 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	CMTM2	Q8TAZ6	248 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	CARD19	Q96LW7	228 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	DERL1	Q9BUN8	251 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	GGACT	Q9BVM4	153 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	NAA50	Q9GZZ1	169 aa	Known RBP	4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	PPDPF	Q9H3Y8	114 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	SCP2D1	Q9UJQ7	156 aa		4.09	□□□□□ -1.75
KATNA1-208	ENST00000494504	TRBV25-1	A0A075B6N4	114 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	IFITM10	A6NMD0	228 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504		H3BVH4	76 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	OR7C2	O60412	319 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	FGF7	P21781	194 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	GNG5	P63218	68 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	FAM162B	Q5T6X4	162 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	LINC00173	Q6ZV60	143 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	TYMSOS	Q8TAI1	123 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	SDHC	Q99643	169 aa	Predicted RBP	4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	VCX3A	Q9NNX9	186 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	UQCC1	Q9NVA1	299 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	WDR83OS	Q9Y284	106 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	PKIG	Q9Y2B9	76 aa		4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.08	□□□□□ -1.76
KATNA1-208	ENST00000494504		A0A087X002	238 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	IGKV3D-20	A0A0C4DH25	116 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504		M0R2T5	61 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504		M0R381	172 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	SFT2D2	O95562	160 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	BCL2	P10415	239 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	BCAP31	P51572	246 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	UBE2L3	P68036	154 aa	Known RBP	4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	PPP1R1A	Q13522	171 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	SPCS2	Q15005	226 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	TMEM128	Q5BJH2	165 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	LINC00337	Q8N6G1	96 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	OR11H4	Q8NGC9	324 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	OR10G8	Q8NGN5	311 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	NDFIP1	Q9BT67	221 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	RPP21	Q9H633	154 aa	Known RBP	4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	GSKIP	Q9P0R6	139 aa		4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	MACF1	Q9UPN3	7388 aa	Known RBP	4.07	□□□□□ -1.76
KATNA1-208	ENST00000494504	C7orf66	A4D0T2	115 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	NCS1	P62166	190 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	SSBP1	Q04837	148 aa	Known RBP	4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	UBE2V1	Q13404	147 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	ZNF56	Q15929	161 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	ZFP69	Q49AA0	526 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	GAGE2E	Q4V326	116 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	SPANXN2	Q5MJ10	180 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	GAGE2A	Q6NT46	116 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	MITD1	Q8WV92	249 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	SFRP2	Q96HF1	295 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	OR5AC2	Q9NZP5	309 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504	GAGE2D	Q9UEU5	116 aa		4.06	□□□□□ -1.76
KATNA1-208	ENST00000494504		A0A087WXM4	84 aa		4.05	□□□□□ -1.76
KATNA1-208	ENST00000494504	IGHV1-24	A0A0C4DH33	117 aa		4.05	□□□□□ -1.76
KATNA1-208	ENST00000494504	TRBV6-1	A0A0K0K1D8	114 aa		4.05	□□□□□ -1.76
KATNA1-208	ENST00000494504	LOC107984640	A0A0U1RRK4	108 aa		4.05	□□□□□ -1.76
KATNA1-208	ENST00000494504	GRIFIN	A4D1Z8	144 aa		4.05	□□□□□ -1.76
KATNA1-208	ENST00000494504		L7N2F9	121 aa		4.05	□□□□□ -1.76
KATNA1-208	ENST00000494504	ARMS2	P0C7Q2	107 aa		4.05	□□□□□ -1.76
KATNA1-208	ENST00000494504	RPL18A	Q02543	176 aa	Known RBP	4.05	□□□□□ -1.76
KATNA1-208	ENST00000494504	SYCN	Q0VAF6	134 aa		4.05	□□□□□ -1.76
KATNA1-208	ENST00000494504	KRTAP19-2	Q3LHN2	52 aa		4.05	□□□□□ -1.76
KATNA1-208	ENST00000494504	EIF5AL1	Q6IS14	154 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms