RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 PEA15Q15121 130 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 SVBPQ8N300 66 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 OR10G8Q8NGN5 311 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 RAB24Q969Q5 203 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 SEC11CQ9BY50 192 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 JPT2Q9H910 190 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 CARHSP1Q9Y2V2 147 aaKnown RBP7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 PHLDA3Q9Y5J5 127 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 TRBV6-8A0A0A6YYG3 113 aa7.08□□□□□ -1.28
SNRNP200-207ENST00000493271 TRAV1-1A0A0B4J248 108 aa7.08□□□□□ -1.28
SNRNP200-207ENST00000493271 F8W036 122 aa7.08□□□□□ -1.28
SNRNP200-207ENST00000493271 ARMS2P0C7Q2 107 aa7.08□□□□□ -1.28
SNRNP200-207ENST00000493271 TMEM97Q5BJF2 176 aa7.08□□□□□ -1.28
SNRNP200-207ENST00000493271 ENHOQ6UWT2 76 aa7.08□□□□□ -1.28
SNRNP200-207ENST00000493271 ZFP82Q8N141 532 aa7.08□□□□□ -1.28
SNRNP200-207ENST00000493271 CLRN3Q8NCR9 226 aa7.08□□□□□ -1.28
SNRNP200-207ENST00000493271 NKX6-2Q9C056 277 aaPredicted RBP7.08□□□□□ -1.28
SNRNP200-207ENST00000493271 ARL2-SNX15V9GYD0 113 aa7.08□□□□□ -1.28
SNRNP200-207ENST00000493271 SNAPINO95295 136 aa7.07□□□□□ -1.28
SNRNP200-207ENST00000493271 IFNA1P01562 189 aa7.07□□□□□ -1.28
SNRNP200-207ENST00000493271 HLA-DQA1P01909 254 aa7.07□□□□□ -1.28
SNRNP200-207ENST00000493271 C10orf91Q5T1B1 145 aa7.07□□□□□ -1.28
SNRNP200-207ENST00000493271 COX8CQ7Z4L0 72 aa7.07□□□□□ -1.28
SNRNP200-207ENST00000493271 HIST1H2BAQ96A08 127 aa7.07□□□□□ -1.28
SNRNP200-207ENST00000493271 RNF185Q96GF1 192 aa7.07□□□□□ -1.28
SNRNP200-207ENST00000493271 ZFP30Q9Y2G7 519 aa7.07□□□□□ -1.28
SNRNP200-207ENST00000493271 LRP2P98164 4655 aa7.07□□□□□ -1.28
SNRNP200-207ENST00000493271 ANGP03950 147 aaKnown RBP7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 PRSS1P07477 247 aa7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 TAGLN2P37802 199 aaKnown RBP7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 FHITP49789 147 aa7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 C15orf54Q8N8G6 183 aa7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 SFT2D1Q8WV19 159 aa7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 MBD3L1Q8WWY6 194 aa7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 ACTR3CQ9C0K3 210 aaPredicted RBP7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 EIF5A2Q9GZV4 153 aaKnown RBP7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 PRR34Q9NV39 138 aa7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 RNF213Q63HN8 5207 aa7.06□□□□□ -1.28
SNRNP200-207ENST00000493271 A0A087WWL8 130 aa7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 CTXND1A0A1B0GTU2 59 aa7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 MAP1LC3B2A6NCE7 125 aa7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 ADCYAP1P18509 176 aa7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 RAB4BP61018 213 aa7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 CNBPP62633 177 aaKnown RBP7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 CIRBPQ14011 172 aaKnown RBP7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 MPV17L2Q567V2 206 aa7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 FAM162BQ5T6X4 162 aa7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 SDIM1Q6ZPB5 146 aa7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 Q86TA4 180 aa7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 MAP1LC3BQ9GZQ8 125 aa7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.05□□□□□ -1.28
SNRNP200-207ENST00000493271 M0R036 132 aa7.04□□□□□ -1.28
SNRNP200-207ENST00000493271 M0R381 172 aa7.04□□□□□ -1.28
SNRNP200-207ENST00000493271 PEX7O00628 323 aa7.04□□□□□ -1.28
SNRNP200-207ENST00000493271 SCO1O75880 301 aa7.04□□□□□ -1.28
SNRNP200-207ENST00000493271 SRSF3P84103 164 aaKnown RBP7.04□□□□□ -1.28
SNRNP200-207ENST00000493271 LINC01559Q495D7 138 aa7.04□□□□□ -1.28
SNRNP200-207ENST00000493271 CHCHD5Q9BSY4 110 aa7.04□□□□□ -1.28
SNRNP200-207ENST00000493271 DPH3P1Q9H4G8 78 aa7.04□□□□□ -1.28
SNRNP200-207ENST00000493271 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.03□□□□□ -1.28
SNRNP200-207ENST00000493271 TRAV34A0A0B4J273 112 aa7.03□□□□□ -1.28
SNRNP200-207ENST00000493271 A0A1B0GV50 99 aa7.03□□□□□ -1.28
SNRNP200-207ENST00000493271 SH2D1AO60880 128 aa7.03□□□□□ -1.28
SNRNP200-207ENST00000493271 NDUFS6O75380 124 aaKnown RBP7.03□□□□□ -1.28
SNRNP200-207ENST00000493271 BCL2P10415 239 aa7.03□□□□□ -1.28
SNRNP200-207ENST00000493271 CRIP1P50238 77 aa7.03□□□□□ -1.28
SNRNP200-207ENST00000493271 PRR27Q6MZM9 219 aa7.03□□□□□ -1.28
SNRNP200-207ENST00000493271 FMC1Q96HJ9 113 aa7.03□□□□□ -1.28
SNRNP200-207ENST00000493271 TCEAL7Q9BRU2 100 aa7.03□□□□□ -1.28
SNRNP200-207ENST00000493271 IGHV3-64A0A075B6Q5 118 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 TRAV8-4A0A0B4J246 113 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 TRBV6-1A0A0K0K1D8 114 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 GRIFINA4D1Z8 144 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 LCE2BO14633 110 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 P01737 135 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 CXCL1P09341 107 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 GZMBP10144 247 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 UBE2G1P62253 170 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 ZNF674Q2M3X9 581 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 NEXN-AS1Q8NBZ9 246 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 MANBALQ9NQG1 85 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 AP5S1Q9NUS5 200 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 TNXBP22105 4242 aa7.02□□□□□ -1.29
SNRNP200-207ENST00000493271 TRBV25-1A0A075B6N4 114 aa7.01□□□□□ -1.29
SNRNP200-207ENST00000493271 ZNF56Q15929 161 aa7.01□□□□□ -1.29
SNRNP200-207ENST00000493271 ZNF726P1Q15940 193 aa7.01□□□□□ -1.29
SNRNP200-207ENST00000493271 KRTAP26-1Q6PEX3 210 aa7.01□□□□□ -1.29
SNRNP200-207ENST00000493271 GNG13Q9P2W3 67 aa7.01□□□□□ -1.29
SNRNP200-207ENST00000493271 VAX2Q9UIW0 290 aa7.01□□□□□ -1.29
SNRNP200-207ENST00000493271 C9JQL5 133 aa7□□□□□ -1.29
SNRNP200-207ENST00000493271 PANO1I0J062 215 aa7□□□□□ -1.29
SNRNP200-207ENST00000493271 SRP19P09132 144 aaKnown RBP7□□□□□ -1.29
SNRNP200-207ENST00000493271 RBX1P62877 108 aa7□□□□□ -1.29
SNRNP200-207ENST00000493271 CCL20P78556 96 aa7□□□□□ -1.29
SNRNP200-207ENST00000493271 RHEBQ15382 184 aa7□□□□□ -1.29
SNRNP200-207ENST00000493271 LINC00269Q8N2A0 174 aa7□□□□□ -1.29
SNRNP200-207ENST00000493271 C7orf33Q8WU49 177 aa7□□□□□ -1.29
SNRNP200-207ENST00000493271 DPH3Q96FX2 82 aa7□□□□□ -1.29
SNRNP200-207ENST00000493271 TMA7Q9Y2S6 64 aaKnown RBP7□□□□□ -1.29
SNRNP200-207ENST00000493271 A0A087WYN8 130 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms