RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 IGKV2D-24A0A075B6R9 120 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 TRAV34A0A0B4J273 112 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 TRBV10-1A0A0K0K1A3 114 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 FAM231BA6NCW3 169 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 PGPEP1LA6NFU8 196 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 M0R381 172 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 CRPP02741 224 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 ARMS2P0C7Q2 107 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 AKR1C3P42330 323 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 RAB4BP61018 213 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 PRR3P79522 188 aaKnown RBP3.36□□□□□ -1.87
SEC13-219ENST00000492602 FAM74A4Q5TZK3 123 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 SPANXN1Q5VSR9 72 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 DPPA3Q6W0C5 159 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 SMIM15Q7Z3B0 74 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 SFT2D1Q8WV19 159 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 GTSF1Q8WW33 167 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 CHCHD7Q9BUK0 85 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 ARL2-SNX15V9GYD0 113 aa3.36□□□□□ -1.87
SEC13-219ENST00000492602 A0A087WYN8 130 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 MAP1LC3B2A6NCE7 125 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 FAM74A7A6NL05 159 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 M0R036 132 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 IFNA1P01562 189 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 RAB5CP51148 216 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 RPS20P60866 119 aaKnown RBP3.35□□□□□ -1.87
SEC13-219ENST00000492602 IFITM3Q01628 133 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 RPL7L1Q6DKI1 246 aaKnown RBP3.35□□□□□ -1.87
SEC13-219ENST00000492602 DAZ4Q86SG3 579 aaKnown RBP3.35□□□□□ -1.87
SEC13-219ENST00000492602 BAGE2Q86Y30 109 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 C9orf163Q8N9P6 203 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 TVP23CQ96ET8 276 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 C9orf85Q96MD7 179 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 C1orf43Q9BWL3 253 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 MAP1LC3BQ9GZQ8 125 aa3.35□□□□□ -1.87
SEC13-219ENST00000492602 DAZ3Q9NR90 486 aaKnown RBP3.35□□□□□ -1.87
SEC13-219ENST00000492602 TRBV6-1A0A0K0K1D8 114 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 KRBOX1C9JBD0 128 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 F2Z2F3 143 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 H3BVH4 76 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 ARPC5O15511 151 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 SH2D1AO60880 128 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 ZNF56Q15929 161 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 DNLZQ5SXM8 178 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 SDIM1Q6ZPB5 146 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 TMUB2Q71RG4 321 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 KCNRGQ8N5I3 272 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 SFRP2Q96HF1 295 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 DNAJC30Q96LL9 226 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 LINC00479Q96M42 142 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 CHCHD5Q9BSY4 110 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 PARLQ9H300 379 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 KLK12Q9UKR0 248 aa3.34□□□□□ -1.87
SEC13-219ENST00000492602 TRBV25-1A0A075B6N4 114 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 A0A087WWL8 130 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 TMSB15BA0A087X1C1 80 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 GRIFINA4D1Z8 144 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 UBE2L6O14933 153 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 PDE6DO43924 150 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 PAGE4O60829 102 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 LTAP01374 205 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 ANGP03950 147 aaKnown RBP3.33□□□□□ -1.88
SEC13-219ENST00000492602 RNASE3P12724 160 aaKnown RBP3.33□□□□□ -1.88
SEC13-219ENST00000492602 TAGLN2P37802 199 aaKnown RBP3.33□□□□□ -1.88
SEC13-219ENST00000492602 ZNF80P51504 273 aaPredicted RBP3.33□□□□□ -1.88
SEC13-219ENST00000492602 CACNG7P62955 275 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 CIRBPQ14011 172 aaKnown RBP3.33□□□□□ -1.88
SEC13-219ENST00000492602 ZNF674Q2M3X9 581 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 DGAT2L7PQ6IED9 249 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 CFAP161Q6P656 301 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 Q86TA4 180 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 ZNF664Q8N3J9 261 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 FAM213BQ8TBF2 198 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 UBE2WQ96B02 151 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 TPPP3Q9BW30 176 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 MANBALQ9NQG1 85 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 PSORS1C2Q9UIG4 136 aa3.33□□□□□ -1.88
SEC13-219ENST00000492602 TRBV6-8A0A0A6YYG3 113 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.32□□□□□ -1.88
SEC13-219ENST00000492602 IGKV3D-20A0A0C4DH25 116 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 HMSDA8MTL9 139 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 CXCL1P09341 107 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 TRGC1P0CF51 173 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 CHTF8P0CG12 524 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 GZMBP10144 247 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 GNG4P50150 75 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 SSTP61278 116 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 SRSF9Q13242 221 aaKnown RBP eCLIP3.32□□□□□ -1.88
SEC13-219ENST00000492602 ZNF345Q14585 488 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 MIAQ16674 131 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 PRR27Q6MZM9 219 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 TEX261Q6UWH6 196 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 COX8CQ7Z4L0 72 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 NIT1Q86X76 327 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 C15orf54Q8N8G6 183 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 PRR26Q8N8Z3 221 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 BORCS7Q96B45 105 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 RNF185Q96GF1 192 aa3.32□□□□□ -1.88
SEC13-219ENST00000492602 AP1S3Q96PC3 154 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms