RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 FAM19A2Q8N3H0 131 aa4.94□□□□□ -1.62
PDAP1-203ENST00000488214 Q8NAQ8 132 aa4.94□□□□□ -1.62
PDAP1-203ENST00000488214 TMEM18Q96B42 140 aa4.94□□□□□ -1.62
PDAP1-203ENST00000488214 PACRGQ96M98 296 aaPredicted RBP4.94□□□□□ -1.62
PDAP1-203ENST00000488214 HIST1H2BLQ99880 126 aa4.94□□□□□ -1.62
PDAP1-203ENST00000488214 OVOL2Q9BRP0 275 aa4.94□□□□□ -1.62
PDAP1-203ENST00000488214 ST20Q9HBF5 79 aa4.94□□□□□ -1.62
PDAP1-203ENST00000488214 NXT2Q9NPJ8 142 aaKnown RBP4.94□□□□□ -1.62
PDAP1-203ENST00000488214 AP5S1Q9NUS5 200 aa4.94□□□□□ -1.62
PDAP1-203ENST00000488214 MGAM2Q2M2H8 2515 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 SDHAF1A6NFY7 115 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 LYRM9A8MSI8 78 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 K7EQD1 137 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 LINC00614P0C842 121 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 DEFB121Q5J5C9 76 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 LINC00612Q8N6U2 182 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 Q8N8P6 123 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 OR10D4PQ8NGN7 298 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 C20orf78Q9BR46 151 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 CELA1Q9UNI1 258 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 TP53TG1Q9Y2A0 90 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 DNHD1Q96M86 4753 aa4.93□□□□□ -1.62
PDAP1-203ENST00000488214 TRGV4A0A0C4DH28 118 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 TCAPO15273 167 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 HBDP02042 147 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 DAD1P61803 113 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 KRTAP21-3Q3LHN1 58 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 Q6ZSN1 163 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 SBSPONQ8IVN8 264 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 MRAPQ8TCY5 172 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 DEFB104AQ8WTQ1 72 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 SPATA25Q9BR10 227 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 TMEM70Q9BUB7 260 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 EDA2RQ9HAV5 297 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 NIT2Q9NQR4 276 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 DKK2Q9UBU2 259 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 TNFRSF18Q9Y5U5 241 aa4.92□□□□□ -1.62
PDAP1-203ENST00000488214 IGLV2-18A0A075B6J9 118 aa4.91□□□□□ -1.62
PDAP1-203ENST00000488214 TRBV6-5A0A0K0K1A5 114 aa4.91□□□□□ -1.62
PDAP1-203ENST00000488214 TEX48A0A1B0GUV7 120 aa4.91□□□□□ -1.62
PDAP1-203ENST00000488214 SPART-AS1P0CW21 52 aa4.91□□□□□ -1.62
PDAP1-203ENST00000488214 LAGE3Q14657 143 aa4.91□□□□□ -1.62
PDAP1-203ENST00000488214 RHOHQ15669 191 aa4.91□□□□□ -1.62
PDAP1-203ENST00000488214 NEXN-AS1Q8NBZ9 246 aa4.91□□□□□ -1.62
PDAP1-203ENST00000488214 KIR2DL4Q99706 377 aa4.91□□□□□ -1.62
PDAP1-203ENST00000488214 C11orf68Q9H3H3 251 aaKnown RBP4.91□□□□□ -1.62
PDAP1-203ENST00000488214 NBEAL1Q6ZS30 2694 aa4.91□□□□□ -1.62
PDAP1-203ENST00000488214 HUWE1Q7Z6Z7 4374 aaKnown RBP4.9□□□□□ -1.62
PDAP1-203ENST00000488214 A0A096LNJ9 63 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 A0A0J9YWU9 116 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 GAGE12JA6NER3 117 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 LINC01546A6NGU7 62 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 PRSS47A8MTI9 375 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 CIDEAO60543 219 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 LEPROTL1O95214 131 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 NUDT3O95989 172 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 HTN3P15516 51 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 BTF3P20290 206 aaKnown RBP4.9□□□□□ -1.63
PDAP1-203ENST00000488214 FCER1GP30273 86 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 KRTDAPP60985 99 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 RPL32P62910 135 aaKnown RBP4.9□□□□□ -1.63
PDAP1-203ENST00000488214 RPL36AP83881 106 aaKnown RBP4.9□□□□□ -1.63
PDAP1-203ENST00000488214 GAGE1Q13065 139 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 GAGE4Q13068 117 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 GAGE5Q13069 117 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 GAGE13Q4V321 117 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 ORMDL2Q53FV1 153 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 SLC25A29Q8N8R3 303 aa4.9□□□□□ -1.63
PDAP1-203ENST00000488214 PHLDA1Q8WV24 401 aaPredicted RBP4.9□□□□□ -1.63
PDAP1-203ENST00000488214 RPL36ALQ969Q0 106 aaKnown RBP4.9□□□□□ -1.63
PDAP1-203ENST00000488214 NBEAL2Q6ZNJ1 2754 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 IGHV3-38A0A0C4DH36 116 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 TRBV10-1A0A0K0K1A3 114 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 TRBV27A0A0K0K1C4 114 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 LOC100131303A0A0U1RQF7 123 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 TRBV6-4A0A1B0GX49 114 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 H0Y8G0 127 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 I3L3M4 83 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 VCYO14598 125 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 TSHBP01222 138 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 ATP5G1P05496 136 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 SMIM6P0DI80 62 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 POLR2KP53803 58 aaKnown RBP4.89□□□□□ -1.63
PDAP1-203ENST00000488214 FHL2Q14192 279 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 LINC00173Q6ZV60 143 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 ZNRF2Q8NHG8 242 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 DNAJC30Q96LL9 226 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 C18orf15Q96N68 181 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 TM2D3Q9BRN9 247 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 PRADC1Q9BSG0 188 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 Q9UF83 564 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 HSPB8Q9UJY1 196 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 TENM3Q9P273 2699 aa4.89□□□□□ -1.63
PDAP1-203ENST00000488214 A0A0J9YY99 117 aa4.88□□□□□ -1.63
PDAP1-203ENST00000488214 A6NJY4 79 aa4.88□□□□□ -1.63
PDAP1-203ENST00000488214 F5H768 121 aa4.88□□□□□ -1.63
PDAP1-203ENST00000488214 K7EMI3 77 aa4.88□□□□□ -1.63
PDAP1-203ENST00000488214 ZMAT4Q9H898 229 aa4.88□□□□□ -1.63
PDAP1-203ENST00000488214 DNAH9Q9NYC9 4486 aa4.87□□□□□ -1.63
PDAP1-203ENST00000488214 TRBV7-3A0A075B6L6 115 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms