RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 GAGE5Q13069 117 aa10.28□□□□□ -0.76
COPS7B-221ENST00000488111 GAGE6Q13070 117 aa10.28□□□□□ -0.76
COPS7B-221ENST00000488111 LYRM7Q5U5X0 104 aa10.28□□□□□ -0.76
COPS7B-221ENST00000488111 ZFP2Q6ZN57 461 aa10.28□□□□□ -0.76
COPS7B-221ENST00000488111 CITED2Q99967 270 aaPredicted RBP10.28□□□□□ -0.76
COPS7B-221ENST00000488111 C2CD3Q4AC94 2353 aa10.28□□□□□ -0.76
COPS7B-221ENST00000488111 ZNF688P0C7X2 276 aa10.28□□□□□ -0.76
COPS7B-221ENST00000488111 PROK1P58294 105 aa10.28□□□□□ -0.76
COPS7B-221ENST00000488111 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.28□□□□□ -0.76
COPS7B-221ENST00000488111 KLHL30-AS1Q8NEE0 82 aa10.28□□□□□ -0.76
COPS7B-221ENST00000488111 SMAD5-AS1Q9Y6J3 95 aa10.27□□□□□ -0.77
COPS7B-221ENST00000488111 LOC107984156A0A0G2JMH3 177 aa10.26□□□□□ -0.77
COPS7B-221ENST00000488111 NDUFA4O00483 81 aa10.26□□□□□ -0.77
COPS7B-221ENST00000488111 CD7P09564 240 aa10.26□□□□□ -0.77
COPS7B-221ENST00000488111 HLA-DMBP28068 263 aa10.26□□□□□ -0.77
COPS7B-221ENST00000488111 ZFAND6Q6FIF0 208 aa10.26□□□□□ -0.77
COPS7B-221ENST00000488111 ARL17AQ8IVW1 177 aa10.26□□□□□ -0.77
COPS7B-221ENST00000488111 CITED1Q99966 193 aa10.26□□□□□ -0.77
COPS7B-221ENST00000488111 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
COPS7B-221ENST00000488111 IGKV3D-20A0A0C4DH25 116 aa10.25□□□□□ -0.77
COPS7B-221ENST00000488111 EDN2P20800 178 aa10.25□□□□□ -0.77
COPS7B-221ENST00000488111 KRTAP10-3P60369 221 aa10.25□□□□□ -0.77
COPS7B-221ENST00000488111 IGFL4Q6B9Z1 124 aa10.25□□□□□ -0.77
COPS7B-221ENST00000488111 PRADC1Q9BSG0 188 aa10.25□□□□□ -0.77
COPS7B-221ENST00000488111 TRAV26-2A0A0B4J265 109 aa10.25□□□□□ -0.77
COPS7B-221ENST00000488111 TMEM262E9PQX1 116 aa10.25□□□□□ -0.77
COPS7B-221ENST00000488111 TCL1BO95988 128 aa10.25□□□□□ -0.77
COPS7B-221ENST00000488111 C4orf3Q8WVX3 66 aa10.25□□□□□ -0.77
COPS7B-221ENST00000488111 METTL26Q96S19 204 aa10.25□□□□□ -0.77
COPS7B-221ENST00000488111 TRBV20-1A0A075B6N2 111 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 A8MWV9 139 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 HOXD3P31249 432 aaPredicted RBP10.24□□□□□ -0.77
COPS7B-221ENST00000488111 SLURP1P55000 103 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 SYNJ2BPP57105 145 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 ERCC8Q13216 396 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 TOMM6Q96B49 74 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 PLEKHB2Q96CS7 222 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 SMIM2Q9BVW6 85 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 IGHV4-4A0A075B6R2 117 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 IGHV7-4-1A0A0J9YVY3 117 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 ZNF815PA8K554 130 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 NHLRC4P0CG21 123 aaPredicted RBP10.24□□□□□ -0.77
COPS7B-221ENST00000488111 GPHB5Q86YW7 130 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 C11orf21Q9P2W6 132 aa10.24□□□□□ -0.77
COPS7B-221ENST00000488111 BUB3O43684 328 aa10.23□□□□□ -0.77
COPS7B-221ENST00000488111 NDUFA11Q86Y39 141 aa10.23□□□□□ -0.77
COPS7B-221ENST00000488111 SCGB3A1Q96QR1 104 aa10.23□□□□□ -0.77
COPS7B-221ENST00000488111 RBAKDNA6NC62 111 aa10.23□□□□□ -0.77
COPS7B-221ENST00000488111 ORMDL2Q53FV1 153 aa10.23□□□□□ -0.77
COPS7B-221ENST00000488111 SFTA2Q6UW10 78 aa10.23□□□□□ -0.77
COPS7B-221ENST00000488111 ANKRD29Q8N6D5 301 aa10.23□□□□□ -0.77
COPS7B-221ENST00000488111 UFC1Q9Y3C8 167 aa10.23□□□□□ -0.77
COPS7B-221ENST00000488111 PRAC2D3DTV9 90 aa10.22□□□□□ -0.77
COPS7B-221ENST00000488111 SRSF9Q13242 221 aaKnown RBP eCLIP10.22□□□□□ -0.77
COPS7B-221ENST00000488111 NSUN5P1Q3KNT7 163 aa10.22□□□□□ -0.77
COPS7B-221ENST00000488111 SHISA2Q6UWI4 295 aa10.22□□□□□ -0.77
COPS7B-221ENST00000488111 M0QXV9 152 aa10.22□□□□□ -0.77
COPS7B-221ENST00000488111 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
COPS7B-221ENST00000488111 BAALCQ8WXS3 180 aa10.22□□□□□ -0.77
COPS7B-221ENST00000488111 RAX2Q96IS3 184 aa10.22□□□□□ -0.77
COPS7B-221ENST00000488111 KIR2DL4Q99706 377 aa10.22□□□□□ -0.77
COPS7B-221ENST00000488111 B5MCH6 92 aa10.21□□□□□ -0.77
COPS7B-221ENST00000488111 RHODO00212 210 aa10.21□□□□□ -0.77
COPS7B-221ENST00000488111 RASL10AQ92737 203 aa10.21□□□□□ -0.77
COPS7B-221ENST00000488111 DAZ1Q9NQZ3 744 aaKnown RBP10.21□□□□□ -0.77
COPS7B-221ENST00000488111 U3KQE9 123 aa10.21□□□□□ -0.77
COPS7B-221ENST00000488111 PRIMA1Q86XR5 153 aa10.21□□□□□ -0.78
COPS7B-221ENST00000488111 SLC50A1Q9BRV3 221 aa10.21□□□□□ -0.78
COPS7B-221ENST00000488111 RHPN1-AS1Q9BWJ2 59 aa10.2□□□□□ -0.78
COPS7B-221ENST00000488111 ADARB2-AS1A8MUL3 147 aa10.19□□□□□ -0.78
COPS7B-221ENST00000488111 ASIPP42127 132 aa10.19□□□□□ -0.78
COPS7B-221ENST00000488111 A0A0J9YY99 117 aa10.19□□□□□ -0.78
COPS7B-221ENST00000488111 CCL24O00175 119 aa10.19□□□□□ -0.78
COPS7B-221ENST00000488111 KRTAP24-1Q3LI83 254 aa10.19□□□□□ -0.78
COPS7B-221ENST00000488111 IGKV3-7A0A075B6H7 116 aa10.18□□□□□ -0.78
COPS7B-221ENST00000488111 K7EMT4 169 aa10.18□□□□□ -0.78
COPS7B-221ENST00000488111 CFC1BP0CG36 223 aa10.18□□□□□ -0.78
COPS7B-221ENST00000488111 CFC1P0CG37 223 aa10.18□□□□□ -0.78
COPS7B-221ENST00000488111 C10orf126Q8N4M7 172 aa10.18□□□□□ -0.78
COPS7B-221ENST00000488111 AGPAT4-IT1Q9H0P7 198 aa10.18□□□□□ -0.78
COPS7B-221ENST00000488111 H3BVH4 76 aa10.17□□□□□ -0.78
COPS7B-221ENST00000488111 LGALS9O00182 355 aa10.17□□□□□ -0.78
COPS7B-221ENST00000488111 IGHV3-30P01768 117 aa10.17□□□□□ -0.78
COPS7B-221ENST00000488111 IGHV3-30-5P0DP03 117 aa10.17□□□□□ -0.78
COPS7B-221ENST00000488111 NDUFV3P56181 108 aaKnown RBP10.17□□□□□ -0.78
COPS7B-221ENST00000488111 SUMO2P61956 95 aaKnown RBP10.17□□□□□ -0.78
COPS7B-221ENST00000488111 RPL11P62913 178 aaKnown RBP10.17□□□□□ -0.78
COPS7B-221ENST00000488111 SPANXN1Q5VSR9 72 aa10.17□□□□□ -0.78
COPS7B-221ENST00000488111 FAM110AQ9BQ89 295 aa10.17□□□□□ -0.78
COPS7B-221ENST00000488111 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
COPS7B-221ENST00000488111 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.17□□□□□ -0.78
COPS7B-221ENST00000488111 TRBV7-9A0A0J9YWB2 115 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 GAGE2BQ13066 116 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 GAGE2EQ4V326 116 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 Q6Q795 121 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 RNF182Q8N6D2 247 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 GAGE2DQ9UEU5 116 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 GAGE12JA6NER3 117 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 SLC25A20O43772 301 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 GAGE7O76087 117 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 329 ms