RNA–Protein interactions for RNA: ENST00000487257.1

PDE12-202, Transcript of phosphodiesterase 12, humanhuman

TSL 1 (best) BASIC

Gene PDE12, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-202ENST00000487257 HOXD3P31249 432 aaPredicted RBP12.32□□□□□ -0.44
PDE12-202ENST00000487257 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
PDE12-202ENST00000487257 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.44
PDE12-202ENST00000487257 IGHV1OR15-1A0A075B7D0 117 aa12.32□□□□□ -0.44
PDE12-202ENST00000487257 LINC01549A6NIU2 74 aa12.32□□□□□ -0.44
PDE12-202ENST00000487257 PRB1P04280 392 aa12.32□□□□□ -0.44
PDE12-202ENST00000487257 C9orf85Q96MD7 179 aa12.32□□□□□ -0.44
PDE12-202ENST00000487257 DUX3Q96PT4 197 aa12.32□□□□□ -0.44
PDE12-202ENST00000487257 TRBV27A0A0K0K1C4 114 aa12.31□□□□□ -0.44
PDE12-202ENST00000487257 KNCNA6PVL3 124 aa12.31□□□□□ -0.44
PDE12-202ENST00000487257 LGALS9O00182 355 aa12.31□□□□□ -0.44
PDE12-202ENST00000487257 LINC01356Q8N9X3 169 aa12.31□□□□□ -0.44
PDE12-202ENST00000487257 P0DMU3 169 aa12.31□□□□□ -0.44
PDE12-202ENST00000487257 FAM231AP0DMU4 169 aa12.31□□□□□ -0.44
PDE12-202ENST00000487257 FAM231CP0DMU5 169 aa12.31□□□□□ -0.44
PDE12-202ENST00000487257 TRAV26-1A0A087WT03 109 aa12.3□□□□□ -0.44
PDE12-202ENST00000487257 LOC107984156A0A0G2JMH3 177 aa12.3□□□□□ -0.44
PDE12-202ENST00000487257 ARL17AQ8IVW1 177 aa12.3□□□□□ -0.44
PDE12-202ENST00000487257 CCDC168Q8NDH2 2452 aa12.3□□□□□ -0.44
PDE12-202ENST00000487257 PROK1P58294 105 aa12.3□□□□□ -0.44
PDE12-202ENST00000487257 CKS1BP61024 79 aa12.3□□□□□ -0.44
PDE12-202ENST00000487257 SYT8Q8NBV8 401 aa12.3□□□□□ -0.44
PDE12-202ENST00000487257 RBMY1A1P0DJD3 496 aaKnown RBP12.29□□□□□ -0.44
PDE12-202ENST00000487257 RBMY1CP0DJD4 496 aa12.29□□□□□ -0.44
PDE12-202ENST00000487257 RBMY1FQ15415 496 aaKnown RBP12.29□□□□□ -0.44
PDE12-202ENST00000487257 NACAE9PAV3 2078 aa12.29□□□□□ -0.44
PDE12-202ENST00000487257 HERVK_113P61574 105 aa12.29□□□□□ -0.44
PDE12-202ENST00000487257 GAGE13Q4V321 117 aa12.29□□□□□ -0.44
PDE12-202ENST00000487257 USP24Q9UPU5 2620 aa12.29□□□□□ -0.44
PDE12-202ENST00000487257 A0A1B0GWB2 263 aa12.29□□□□□ -0.44
PDE12-202ENST00000487257 F8W1H4 67 aa12.29□□□□□ -0.44
PDE12-202ENST00000487257 SLURP1P55000 103 aa12.29□□□□□ -0.44
PDE12-202ENST00000487257 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
PDE12-202ENST00000487257 A0A0J9YY99 117 aa12.28□□□□□ -0.44
PDE12-202ENST00000487257 GATA3P23771 443 aa12.28□□□□□ -0.44
PDE12-202ENST00000487257 TMEM141Q96I45 108 aa12.28□□□□□ -0.44
PDE12-202ENST00000487257 TIMM17AQ99595 171 aa12.28□□□□□ -0.44
PDE12-202ENST00000487257 Q9UF83 564 aa12.28□□□□□ -0.44
PDE12-202ENST00000487257 RPL32P62910 135 aaKnown RBP12.27□□□□□ -0.44
PDE12-202ENST00000487257 PTH2Q96A98 100 aa12.27□□□□□ -0.44
PDE12-202ENST00000487257 ZNF580Q9UK33 172 aa12.27□□□□□ -0.44
PDE12-202ENST00000487257 A0A1B0GV72 72 aa12.27□□□□□ -0.45
PDE12-202ENST00000487257 DEFB131AP59861 70 aa12.27□□□□□ -0.45
PDE12-202ENST00000487257 VPREB3Q9UKI3 123 aa12.27□□□□□ -0.45
PDE12-202ENST00000487257 AKAP9Q99996 3911 aa12.26□□□□□ -0.45
PDE12-202ENST00000487257 C2CD3Q4AC94 2353 aa12.26□□□□□ -0.45
PDE12-202ENST00000487257 LINC01619G3V211 115 aa12.26□□□□□ -0.45
PDE12-202ENST00000487257 RNASE13Q5GAN3 156 aaKnown RBP12.26□□□□□ -0.45
PDE12-202ENST00000487257 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
PDE12-202ENST00000487257 TRBV6-5A0A0K0K1A5 114 aa12.26□□□□□ -0.45
PDE12-202ENST00000487257 TMEM238LA0A1B0GVL6 79 aa12.26□□□□□ -0.45
PDE12-202ENST00000487257 A6NJY4 79 aa12.26□□□□□ -0.45
PDE12-202ENST00000487257 KHDC1LQ5JSQ8 128 aa12.26□□□□□ -0.45
PDE12-202ENST00000487257 J3QQQ9 107 aa12.25□□□□□ -0.45
PDE12-202ENST00000487257 TSPAN13O95857 204 aa12.25□□□□□ -0.45
PDE12-202ENST00000487257 PRRC2AP48634 2157 aaKnown RBP12.25□□□□□ -0.45
PDE12-202ENST00000487257 PSMB2P49721 201 aa12.25□□□□□ -0.45
PDE12-202ENST00000487257 PAPPA-AS1Q5QFB9 102 aa12.25□□□□□ -0.45
PDE12-202ENST00000487257 TRPT1Q86TN4 253 aaKnown RBP12.25□□□□□ -0.45
PDE12-202ENST00000487257 ZNF702PQ9H963 129 aa12.25□□□□□ -0.45
PDE12-202ENST00000487257 NBPF19A0A087WUL8 3843 aa12.25□□□□□ -0.45
PDE12-202ENST00000487257 ZNF418Q8TF45 676 aaPredicted RBP12.25□□□□□ -0.45
PDE12-202ENST00000487257 A0A096LNT2 108 aa12.24□□□□□ -0.45
PDE12-202ENST00000487257 ODF3Q96PU9 254 aa12.24□□□□□ -0.45
PDE12-202ENST00000487257 A0A0J9YXV3 536 aa12.24□□□□□ -0.45
PDE12-202ENST00000487257 UBE2D1P51668 147 aa12.24□□□□□ -0.45
PDE12-202ENST00000487257 PRO0461Q9UI25 63 aa12.24□□□□□ -0.45
PDE12-202ENST00000487257 LGALS3P17931 250 aaKnown RBP12.24□□□□□ -0.45
PDE12-202ENST00000487257 CRYBA4P53673 196 aa12.24□□□□□ -0.45
PDE12-202ENST00000487257 DSCR9P59020 149 aa12.24□□□□□ -0.45
PDE12-202ENST00000487257 JMJD1CQ15652 2540 aa12.24□□□□□ -0.45
PDE12-202ENST00000487257 KRTAP10-9P60411 292 aa12.23□□□□□ -0.45
PDE12-202ENST00000487257 ADARB2-AS1A8MUL3 147 aa12.23□□□□□ -0.45
PDE12-202ENST00000487257 I3L3M4 83 aa12.23□□□□□ -0.45
PDE12-202ENST00000487257 C20orf203Q8NBC4 194 aa12.23□□□□□ -0.45
PDE12-202ENST00000487257 NDUFA11Q86Y39 141 aa12.22□□□□□ -0.45
PDE12-202ENST00000487257 UBE2E2Q96LR5 201 aa12.22□□□□□ -0.45
PDE12-202ENST00000487257 AMELXQ99217 191 aa12.22□□□□□ -0.45
PDE12-202ENST00000487257 IGHV3-30P01768 117 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 CFC1BP0CG36 223 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 CFC1P0CG37 223 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 NSUN5P1Q3KNT7 163 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 VCX2Q9H322 139 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 J3QR89 54 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 MT-ATP8P03928 68 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 ELANEP08246 267 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 SLC25A29Q8N8R3 303 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 SPXQ9BT56 116 aa12.21□□□□□ -0.45
PDE12-202ENST00000487257 H7C2G1 150 aa12.21□□□□□ -0.46
PDE12-202ENST00000487257 FHL3Q13643 280 aa12.21□□□□□ -0.46
PDE12-202ENST00000487257 Q6YL49 198 aa12.21□□□□□ -0.46
PDE12-202ENST00000487257 APCP25054 2843 aa12.21□□□□□ -0.46
PDE12-202ENST00000487257 IGLV4-3A0A075B6K6 122 aa12.2□□□□□ -0.46
PDE12-202ENST00000487257 RBMY1BA6NDE4 496 aaKnown RBP12.2□□□□□ -0.46
PDE12-202ENST00000487257 RBMY1EA6NEQ0 496 aaKnown RBP12.2□□□□□ -0.46
PDE12-202ENST00000487257 RBMY1DP0C7P1 496 aaKnown RBP12.2□□□□□ -0.46
PDE12-202ENST00000487257 TMEM61Q8N0U2 210 aa12.2□□□□□ -0.46
PDE12-202ENST00000487257 RAX2Q96IS3 184 aa12.2□□□□□ -0.46
PDE12-202ENST00000487257 GEMIN7Q9H840 131 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms