RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MUC21Q5SSG8 566 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 Q6ZTC4 211 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 STHQ8IWL8 128 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 POM121L12Q8N7R1 296 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 PTH2Q96A98 100 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 URB1-AS1Q96HZ7 61 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 C9orf85Q96MD7 179 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 MSRB1Q9NZV6 116 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 IGHV3-16A0A0C4DH30 117 aa6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 MUC21A0A0G2JKD1 596 aa6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 MUC21A0A140T8X8 626 aa6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 GNRH2O43555 120 aa6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 BTF3P20290 206 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 EVI2AP22794 236 aa6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 PKIAP61925 76 aa6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 NUTF2P61970 127 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 PMCHL1Q16048 86 aa6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 SPINK13Q1W4C9 94 aa6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 CSNK1G2-AS1Q8NCQ2 148 aa6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 C20orf78Q9BR46 151 aa6.71□□□□□ -1.34
TMEM39A-208ENST00000486159 HERC1Q15751 4861 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 IGHV1-24A0A0C4DH33 117 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 C20orf202A1L168 122 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 TSTD3H0UI37 97 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 LEPROTL1O95214 131 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 TNFRSF6BO95407 300 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 NPYP01303 97 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 INSP01308 110 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 SMIM17P0DL12 118 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 FXYD7P58549 80 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 KRTDAPP60985 99 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 KIR3DS1Q14943 382 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 Q6ZQT7 251 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 FAM19A2Q8N3H0 131 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 Q8N8P6 123 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 NDUFAF3Q9BU61 184 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 HECTD4Q9Y4D8 3996 aa6.7□□□□□ -1.34
TMEM39A-208ENST00000486159 CRXO43186 299 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 IGKV3-20P01619 116 aa6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 C3orf79P0CE67 100 aa6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 IFI27P40305 119 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 SSTP61278 116 aa6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 RPL32P62910 135 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 C12orf74Q32Q52 190 aa6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 TEX43Q6ZNM6 134 aa6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 TMEM70Q9BUB7 260 aa6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 MAP1LC3CQ9BXW4 147 aa6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 TIMM8BQ9Y5J9 83 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-208ENST00000486159 TRAV12-2A0A075B6T6 113 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 CBY3A6NI87 242 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 LINC01549A6NIU2 74 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 HBDP02042 147 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 G0S2P27469 103 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 ZNF415Q09FC8 603 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 PET117Q6UWS5 81 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 SPATA12Q7Z6I5 190 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 NRACQ8N912 160 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 SPXQ9BT56 116 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 XCL2Q9UBD3 114 aa6.68□□□□□ -1.34
TMEM39A-208ENST00000486159 PCP4L1A6NKN8 68 aa6.67□□□□□ -1.34
TMEM39A-208ENST00000486159 M0R2N4 97 aa6.67□□□□□ -1.34
TMEM39A-208ENST00000486159 NCR2O95944 276 aa6.67□□□□□ -1.34
TMEM39A-208ENST00000486159 MIFP14174 115 aa6.67□□□□□ -1.34
TMEM39A-208ENST00000486159 FCER1GP30273 86 aa6.67□□□□□ -1.34
TMEM39A-208ENST00000486159 MORN3Q6PF18 240 aaPredicted RBP6.67□□□□□ -1.34
TMEM39A-208ENST00000486159 C14orf178Q8N769 122 aaPredicted RBP6.67□□□□□ -1.34
TMEM39A-208ENST00000486159 C1QTNF4Q9BXJ3 329 aa6.67□□□□□ -1.34
TMEM39A-208ENST00000486159 KIF25-AS1Q9Y6Z4 181 aa6.67□□□□□ -1.34
TMEM39A-208ENST00000486159 IGLV2-18A0A075B6J9 118 aa6.66□□□□□ -1.34
TMEM39A-208ENST00000486159 LOC389332A0A1B0GUA5 103 aa6.66□□□□□ -1.34
TMEM39A-208ENST00000486159 A8MWV9 139 aa6.66□□□□□ -1.34
TMEM39A-208ENST00000486159 SMKR1H3BMG3 65 aa6.66□□□□□ -1.34
TMEM39A-208ENST00000486159 SYS1-DBNDD2H3BUS1 97 aa6.66□□□□□ -1.34
TMEM39A-208ENST00000486159 M0R2P5 195 aa6.66□□□□□ -1.34
TMEM39A-208ENST00000486159 TCAPO15273 167 aa6.66□□□□□ -1.34
TMEM39A-208ENST00000486159 PRM2P04554 102 aa6.66□□□□□ -1.34
TMEM39A-208ENST00000486159 Q8N976 141 aa6.66□□□□□ -1.34
TMEM39A-208ENST00000486159 VAMP8Q9BV40 100 aa6.66□□□□□ -1.34
TMEM39A-208ENST00000486159 PKD1P98161 4303 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 IGHV3OR16-12A0A075B7B8 117 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 DEFB131BA0A096LNP1 70 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 TRAV10A0A0B4J240 114 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 TRBV6-5A0A0K0K1A5 114 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 H7C1H1 209 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 MGPP08493 103 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 EMP1P54849 157 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 LINC00315P59091 139 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 SUMO2P61956 95 aaKnown RBP6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 LAGE3Q14657 143 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 ORMDL2Q53FV1 153 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 ZNF664Q8N3J9 261 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 LINC01587Q99440 93 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 SMIM2Q9BVW6 85 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 MDFICQ9P1T7 246 aa6.65□□□□□ -1.34
TMEM39A-208ENST00000486159 MUC4Q99102 2169 aa6.65□□□□□ -1.35
TMEM39A-208ENST00000486159 A0A1B0GVY2 172 aa6.64□□□□□ -1.35
TMEM39A-208ENST00000486159 RHODO00212 210 aa6.64□□□□□ -1.35
TMEM39A-208ENST00000486159 RTL8CO15255 209 aa6.64□□□□□ -1.35
TMEM39A-208ENST00000486159 ATP5LO75964 103 aa6.64□□□□□ -1.35
TMEM39A-208ENST00000486159 ZNF876PQ49A33 203 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms