RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 VMO1Q7Z5L0 202 aa2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 COA5Q86WW8 74 aa2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 Q8N6K4 173 aa2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 V9GYH0 126 aa2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 EDC4Q6P2E9 1401 aaKnown RBP2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 SCN3AQ9NY46 2000 aa2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 PEAK1Q9H792 1746 aa2.74□□□□□ -1.97
R3HDM1-216ENST00000483065 NOTCH2Q04721 2471 aa2.74□□□□□ -1.97
R3HDM1-216ENST00000483065 POLA1P09884 1462 aaPredicted RBP2.74□□□□□ -1.97
R3HDM1-216ENST00000483065 SDHAF1A6NFY7 115 aa2.74□□□□□ -1.97
R3HDM1-216ENST00000483065 CHKB-CPT1BH3BT56 60 aa2.74□□□□□ -1.97
R3HDM1-216ENST00000483065 RNASE3P12724 160 aaKnown RBP2.74□□□□□ -1.97
R3HDM1-216ENST00000483065 HCP5Q6MZN7 132 aa2.74□□□□□ -1.97
R3HDM1-216ENST00000483065 AMELXQ99217 191 aa2.74□□□□□ -1.97
R3HDM1-216ENST00000483065 WFDC10AQ9H1F0 79 aa2.74□□□□□ -1.97
R3HDM1-216ENST00000483065 CROCCQ5TZA2 2017 aa2.74□□□□□ -1.97
R3HDM1-216ENST00000483065 NWD2Q9ULI1 1742 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 CUL9Q8IWT3 2517 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 WNK3Q9BYP7 1800 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 NLRP1Q9C000 1473 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 MAP3K4Q9Y6R4 1608 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 TRBV6-5A0A0K0K1A5 114 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 M0R2N4 97 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 INE1O15225 51 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 ETDBQ3ZM63 59 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 TMEM170BQ5T4T1 132 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 TRPM6Q9BX84 2022 aa2.73□□□□□ -1.97
R3HDM1-216ENST00000483065 NCOA2Q15596 1464 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 SHANK2Q9UPX8 1470 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 LRRC37A3O60309 1634 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 TMEM14DPA8MWL7 114 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 F2Z2F3 143 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 CHD1O14646 1710 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 IGLV3-1P01715 115 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 TFF1P04155 84 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 HMGN3Q15651 99 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 SBF2Q86WG5 1849 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 PPLO60437 1756 aa2.72□□□□□ -1.97
R3HDM1-216ENST00000483065 SHROOM2Q13796 1616 aa2.71□□□□□ -1.97
R3HDM1-216ENST00000483065 KIF14Q15058 1648 aa2.71□□□□□ -1.97
R3HDM1-216ENST00000483065 NRXN1Q9ULB1 1477 aa2.71□□□□□ -1.97
R3HDM1-216ENST00000483065 TRBV25-1A0A075B6N4 114 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 TRBV6-7A0A0A0MS04 114 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 TRAV22A0A0B4J277 110 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 A0A0G2JND7 137 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 H7BZZ5 65 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 IGLC2P0DOY2 106 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 IGLC3P0DOY3 106 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 XAF1Q6GPH4 301 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 DEFB132Q7Z7B7 95 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 C20orf197Q8N268 126 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 LINC00304Q8N9R0 145 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 S100ZQ8WXG8 99 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 LINC01600Q96MT4 127 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 R4GMQ9 66 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 COL4A5P29400 1685 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 ADAMTS9Q9P2N4 1935 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 ABCC1P33527 1531 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 ABCC2Q92887 1545 aa2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 SUPT6HQ7KZ85 1726 aaKnown RBP2.71□□□□□ -1.98
R3HDM1-216ENST00000483065 ZNF142P52746 1687 aaPredicted RBP2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 KCPQ6ZWJ8 1503 aa2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 MRPS14O60783 128 aaKnown RBP2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 FREM3P0C091 2139 aa2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 SAA2P0DJI9 122 aaPredicted RBP2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 NMSQ5H8A3 153 aa2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 COX7B2Q8TF08 81 aa2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 CDC42SE2Q9NRR3 84 aa2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 NDUFA4L2Q9NRX3 87 aa2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 COL4A2P08572 1712 aa2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 DIP2CQ9Y2E4 1556 aa2.7□□□□□ -1.98
R3HDM1-216ENST00000483065 CLTCQ00610 1675 aaKnown RBP2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 MON2Q7Z3U7 1717 aa2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 ZNF815PA8K554 130 aa2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 PPP1R17O96001 155 aa2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 CCL3L1P16619 93 aa2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 RPL37AP61513 92 aaKnown RBP2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 BVES-AS1Q5T3Y7 98 aa2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 Q5VV11 94 aa2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 LINC00643Q86TS7 51 aa2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 ANK1P16157 1881 aa2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 TNRC6AQ8NDV7 1962 aaKnown RBP2.69□□□□□ -1.98
R3HDM1-216ENST00000483065 BLMP54132 1417 aaPredicted RBP2.68□□□□□ -1.98
R3HDM1-216ENST00000483065 SPAG11BQ08648 103 aa2.68□□□□□ -1.98
R3HDM1-216ENST00000483065 SPAG11AQ6PDA7 123 aa2.68□□□□□ -1.98
R3HDM1-216ENST00000483065 PLXNA2O75051 1894 aa2.68□□□□□ -1.98
R3HDM1-216ENST00000483065 DOCK1Q14185 1865 aa2.68□□□□□ -1.98
R3HDM1-216ENST00000483065 MUC4Q99102 2169 aa2.68□□□□□ -1.98
R3HDM1-216ENST00000483065 PTPN23Q9H3S7 1636 aa2.68□□□□□ -1.98
R3HDM1-216ENST00000483065 LRRC9Q6ZRR7 1453 aa2.67□□□□□ -1.98
R3HDM1-216ENST00000483065 IGKV2-40A0A087WW87 121 aaPredicted RBP2.67□□□□□ -1.98
R3HDM1-216ENST00000483065 LOC110117498A0A087WWA1 95 aa2.67□□□□□ -1.98
R3HDM1-216ENST00000483065 HMGN4O00479 90 aa2.67□□□□□ -1.98
R3HDM1-216ENST00000483065 IGKV1-17P01599 117 aa2.67□□□□□ -1.98
R3HDM1-216ENST00000483065 IGKV2D-40P01614 121 aaPredicted RBP2.67□□□□□ -1.98
R3HDM1-216ENST00000483065 PSMG4Q5JS54 123 aa2.67□□□□□ -1.98
R3HDM1-216ENST00000483065 V9GYV3 84 aa2.67□□□□□ -1.98
R3HDM1-216ENST00000483065 CFAP74Q9C0B2 1584 aa2.66□□□□□ -1.98
R3HDM1-216ENST00000483065 SEC16AO15027 2179 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms