RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 GAGE4Q13068 117 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 POM121L12Q8N7R1 296 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 ITPR1Q14643 2758 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 KLLNB2CW77 178 aa13.44□□□□□ -0.26
SSR4-209ENST00000482902 P0DMU3 169 aa13.44□□□□□ -0.26
SSR4-209ENST00000482902 FAM231AP0DMU4 169 aa13.44□□□□□ -0.26
SSR4-209ENST00000482902 FAM231CP0DMU5 169 aa13.44□□□□□ -0.26
SSR4-209ENST00000482902 CFHR3Q02985 330 aa13.44□□□□□ -0.26
SSR4-209ENST00000482902 NXPH4O95158 308 aa13.44□□□□□ -0.26
SSR4-209ENST00000482902 ELANEP08246 267 aa13.44□□□□□ -0.26
SSR4-209ENST00000482902 TMEM95Q3KNT9 176 aa13.44□□□□□ -0.26
SSR4-209ENST00000482902 Q6Q795 121 aa13.44□□□□□ -0.26
SSR4-209ENST00000482902 DEFB104AQ8WTQ1 72 aa13.44□□□□□ -0.26
SSR4-209ENST00000482902 ID1P41134 155 aa13.43□□□□□ -0.26
SSR4-209ENST00000482902 RPL32P62910 135 aaKnown RBP13.43□□□□□ -0.26
SSR4-209ENST00000482902 FAM159AQ6UWV7 190 aa13.43□□□□□ -0.26
SSR4-209ENST00000482902 TMEM141Q96I45 108 aa13.43□□□□□ -0.26
SSR4-209ENST00000482902 ODF3Q96PU9 254 aa13.43□□□□□ -0.26
SSR4-209ENST00000482902 KIF25-AS1Q9Y6Z4 181 aa13.43□□□□□ -0.26
SSR4-209ENST00000482902 AVPP01185 164 aa13.43□□□□□ -0.26
SSR4-209ENST00000482902 IFITM1P13164 125 aa13.43□□□□□ -0.26
SSR4-209ENST00000482902 LINC00315P59091 139 aa13.43□□□□□ -0.26
SSR4-209ENST00000482902 ZNF876PQ49A33 203 aa13.43□□□□□ -0.26
SSR4-209ENST00000482902 LINC01600Q96MT4 127 aa13.43□□□□□ -0.26
SSR4-209ENST00000482902 A0A0B4J2C4 111 aa13.42□□□□□ -0.26
SSR4-209ENST00000482902 K7EMT4 169 aa13.42□□□□□ -0.26
SSR4-209ENST00000482902 TIMM17AQ99595 171 aa13.42□□□□□ -0.26
SSR4-209ENST00000482902 H7C2G1 150 aa13.42□□□□□ -0.26
SSR4-209ENST00000482902 LGALS3P17931 250 aaKnown RBP13.42□□□□□ -0.26
SSR4-209ENST00000482902 POLR2KP53803 58 aaKnown RBP13.42□□□□□ -0.26
SSR4-209ENST00000482902 DCANP1Q8TF63 244 aa13.42□□□□□ -0.26
SSR4-209ENST00000482902 JPT2Q9H910 190 aa13.42□□□□□ -0.26
SSR4-209ENST00000482902 IGHV4OR15-8A0A075B7B6 117 aa13.41□□□□□ -0.26
SSR4-209ENST00000482902 A0A087WW49 117 aa13.41□□□□□ -0.26
SSR4-209ENST00000482902 LINC01620Q4KN68 170 aa13.41□□□□□ -0.26
SSR4-209ENST00000482902 TTC32Q5I0X7 151 aa13.41□□□□□ -0.26
SSR4-209ENST00000482902 RPL13AP40429 203 aaKnown RBP13.41□□□□□ -0.26
SSR4-209ENST00000482902 MUC4Q99102 2169 aa13.41□□□□□ -0.26
SSR4-209ENST00000482902 FAM110AQ9BQ89 295 aa13.41□□□□□ -0.26
SSR4-209ENST00000482902 TRAV12-3A0A0B4J271 114 aa13.4□□□□□ -0.26
SSR4-209ENST00000482902 TEX49A0A1B0GTD5 131 aa13.4□□□□□ -0.26
SSR4-209ENST00000482902 ATXN8Q156A1 80 aa13.4□□□□□ -0.26
SSR4-209ENST00000482902 CFAP161Q6P656 301 aa13.4□□□□□ -0.26
SSR4-209ENST00000482902 A0A087WWL8 130 aa13.39□□□□□ -0.27
SSR4-209ENST00000482902 SUMO4Q6EEV6 95 aa13.39□□□□□ -0.27
SSR4-209ENST00000482902 B4DSR2 109 aa13.39□□□□□ -0.27
SSR4-209ENST00000482902 MUSTN1Q8IVN3 82 aa13.39□□□□□ -0.27
SSR4-209ENST00000482902 TRAV2A0A0B4J234 112 aa13.38□□□□□ -0.27
SSR4-209ENST00000482902 TRAV8-4A0A0B4J246 113 aa13.38□□□□□ -0.27
SSR4-209ENST00000482902 PSMB8P28062 276 aa13.38□□□□□ -0.27
SSR4-209ENST00000482902 SHISA2Q6UWI4 295 aa13.38□□□□□ -0.27
SSR4-209ENST00000482902 C15orf53Q8NAA6 179 aa13.38□□□□□ -0.27
SSR4-209ENST00000482902 F5H697 171 aa13.38□□□□□ -0.27
SSR4-209ENST00000482902 C10orf99Q6UWK7 81 aa13.38□□□□□ -0.27
SSR4-209ENST00000482902 LEPROTO15243 131 aa13.37□□□□□ -0.27
SSR4-209ENST00000482902 TRBV10-2A0A0K0K1G8 114 aa13.37□□□□□ -0.27
SSR4-209ENST00000482902 TMEM223A0PJW6 202 aa13.37□□□□□ -0.27
SSR4-209ENST00000482902 VCYO14598 125 aa13.37□□□□□ -0.27
SSR4-209ENST00000482902 IGHV4-59P01825 116 aa13.37□□□□□ -0.27
SSR4-209ENST00000482902 COL12A1Q99715 3063 aa13.36□□□□□ -0.27
SSR4-209ENST00000482902 SPG11Q96JI7 2443 aa13.36□□□□□ -0.27
SSR4-209ENST00000482902 IGKV3-20P01619 116 aa13.36□□□□□ -0.27
SSR4-209ENST00000482902 HERV-K104P63124 156 aa13.36□□□□□ -0.27
SSR4-209ENST00000482902 SMIM20Q8N5G0 67 aa13.36□□□□□ -0.27
SSR4-209ENST00000482902 Q1RN00 199 aa13.35□□□□□ -0.27
SSR4-209ENST00000482902 ZNF580Q9UK33 172 aa13.35□□□□□ -0.27
SSR4-209ENST00000482902 DEFB112Q30KQ8 113 aa13.35□□□□□ -0.27
SSR4-209ENST00000482902 TRAV12-2A0A075B6T6 113 aa13.34□□□□□ -0.27
SSR4-209ENST00000482902 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.34□□□□□ -0.27
SSR4-209ENST00000482902 SDHAF1A6NFY7 115 aa13.34□□□□□ -0.27
SSR4-209ENST00000482902 H3BMM0 161 aa13.34□□□□□ -0.27
SSR4-209ENST00000482902 TRIAP1O43715 76 aa13.34□□□□□ -0.27
SSR4-209ENST00000482902 FAM74A4Q5TZK3 123 aa13.34□□□□□ -0.27
SSR4-209ENST00000482902 UBE2WQ96B02 151 aa13.34□□□□□ -0.27
SSR4-209ENST00000482902 LGALS9O00182 355 aa13.34□□□□□ -0.27
SSR4-209ENST00000482902 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■□□□ 14.5
SSR4-209ENST00000482902 IGHV3-16A0A0C4DH30 117 aa13.33□□□□□ -0.27
SSR4-209ENST00000482902 TRBV30A0A0K0K1B3 111 aa13.33□□□□□ -0.27
SSR4-209ENST00000482902 TRBV27A0A0K0K1C4 114 aa13.33□□□□□ -0.27
SSR4-209ENST00000482902 M0R2P5 195 aa13.33□□□□□ -0.27
SSR4-209ENST00000482902 OPRPNQ99935 248 aaPredicted RBP13.33□□□□□ -0.27
SSR4-209ENST00000482902 MDFICQ9P1T7 246 aa13.33□□□□□ -0.27
SSR4-209ENST00000482902 A0A0J9YX75 114 aa13.33□□□□□ -0.28
SSR4-209ENST00000482902 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.28
SSR4-209ENST00000482902 NRGNQ92686 78 aa13.33□□□□□ -0.28
SSR4-209ENST00000482902 C9orf85Q96MD7 179 aa13.33□□□□□ -0.28
SSR4-209ENST00000482902 BEX4Q9NWD9 120 aaPredicted RBP13.33□□□□□ -0.28
SSR4-209ENST00000482902 IGHV3-64A0A075B6Q5 118 aa13.32□□□□□ -0.28
SSR4-209ENST00000482902 ZNF22P17026 224 aaPredicted RBP13.32□□□□□ -0.28
SSR4-209ENST00000482902 K7EQG2 157 aa13.31□□□□□ -0.28
SSR4-209ENST00000482902 MAP1AP78559 2803 aaPredicted RBP13.31□□□□□ -0.28
SSR4-209ENST00000482902 TRBV6-5A0A0K0K1A5 114 aa13.3□□□□□ -0.28
SSR4-209ENST00000482902 ZNF56Q15929 161 aa13.3□□□□□ -0.28
SSR4-209ENST00000482902 ZNF256Q9Y2P7 627 aaPredicted RBP13.3□□□□□ -0.28
SSR4-209ENST00000482902 A0A0J9YXY3 114 aa13.3□□□□□ -0.28
SSR4-209ENST00000482902 SYNJ2BPP57105 145 aa13.3□□□□□ -0.28
SSR4-209ENST00000482902 SPINK13Q1W4C9 94 aa13.3□□□□□ -0.28
SSR4-209ENST00000482902 CSPG4Q6UVK1 2322 aa13.29□□□□□ -0.28
SSR4-209ENST00000482902 H7C423 109 aa13.29□□□□□ -0.28
SSR4-209ENST00000482902 MRPL23Q16540 153 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms