RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 H7C1H1 209 aa14.25□□□□□ -0.13
SEC13-217ENST00000482647 BTF3P20290 206 aaKnown RBP14.25□□□□□ -0.13
SEC13-217ENST00000482647 NEXN-AS1Q8NBZ9 246 aa14.25□□□□□ -0.13
SEC13-217ENST00000482647 DNAH17Q9UFH2 4485 aa14.25□□□□□ -0.13
SEC13-217ENST00000482647 M0QY20 66 aa14.24□□□□□ -0.13
SEC13-217ENST00000482647 SUMO4Q6EEV6 95 aa14.24□□□□□ -0.13
SEC13-217ENST00000482647 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.24□□□□□ -0.13
SEC13-217ENST00000482647 A0A1B0GUT8 65 aa14.23□□□□□ -0.13
SEC13-217ENST00000482647 TNFRSF18Q9Y5U5 241 aa14.23□□□□□ -0.13
SEC13-217ENST00000482647 UQCC3Q6UW78 93 aa14.22□□□□□ -0.13
SEC13-217ENST00000482647 DNAJC30Q96LL9 226 aa14.22□□□□□ -0.13
SEC13-217ENST00000482647 NAT8BQ9UHF3 227 aa14.22□□□□□ -0.13
SEC13-217ENST00000482647 FAT2Q9NYQ8 4349 aa14.21□□□□□ -0.13
SEC13-217ENST00000482647 PRSS29PA6NIE9 313 aa14.21□□□□□ -0.13
SEC13-217ENST00000482647 LINC01556Q5JQF7 62 aa14.21□□□□□ -0.13
SEC13-217ENST00000482647 C10orf126Q8N4M7 172 aa14.21□□□□□ -0.13
SEC13-217ENST00000482647 NUP35Q8NFH5 326 aa14.21□□□□□ -0.13
SEC13-217ENST00000482647 PNRC1Q12796 327 aaPredicted RBP14.2□□□□□ -0.14
SEC13-217ENST00000482647 RASL11AQ6T310 242 aa14.2□□□□□ -0.14
SEC13-217ENST00000482647 DAZ4Q86SG3 579 aaKnown RBP14.2□□□□□ -0.14
SEC13-217ENST00000482647 DAZ3Q9NR90 486 aaKnown RBP14.2□□□□□ -0.14
SEC13-217ENST00000482647 SMIM27A0A1W2PRY6 76 aa14.19□□□□□ -0.14
SEC13-217ENST00000482647 RIGQ13278 110 aa14.19□□□□□ -0.14
SEC13-217ENST00000482647 BIRC6Q9NR09 4857 aa14.18□□□□□ -0.14
SEC13-217ENST00000482647 NIT2Q9NQR4 276 aa14.18□□□□□ -0.14
SEC13-217ENST00000482647 PPP1R2P9O14990 202 aa14.17□□□□□ -0.14
SEC13-217ENST00000482647 TMEM97Q5BJF2 176 aa14.17□□□□□ -0.14
SEC13-217ENST00000482647 FRZBQ92765 325 aa14.17□□□□□ -0.14
SEC13-217ENST00000482647 TRBV6-8A0A0A6YYG3 113 aa14.16□□□□□ -0.14
SEC13-217ENST00000482647 IGHV3-30P01768 117 aa14.16□□□□□ -0.14
SEC13-217ENST00000482647 IGHV3-33P01772 117 aa14.16□□□□□ -0.14
SEC13-217ENST00000482647 IGHV3-30-3P0DP02 117 aa14.16□□□□□ -0.14
SEC13-217ENST00000482647 IGHV3-30-5P0DP03 117 aa14.16□□□□□ -0.14
SEC13-217ENST00000482647 NFE4Q86UQ8 179 aa14.16□□□□□ -0.14
SEC13-217ENST00000482647 TMEM191AQ9H0A3 160 aa14.16□□□□□ -0.14
SEC13-217ENST00000482647 TMEM218A2RU14 115 aa14.15□□□□□ -0.14
SEC13-217ENST00000482647 GATD1Q8NB37 220 aa14.15□□□□□ -0.14
SEC13-217ENST00000482647 URGCP-MRPS24S4R325 110 aa14.15□□□□□ -0.14
SEC13-217ENST00000482647 HECTD4Q9Y4D8 3996 aa14.15□□□□□ -0.15
SEC13-217ENST00000482647 TRAV26-2A0A0B4J265 109 aa14.14□□□□□ -0.15
SEC13-217ENST00000482647 MT-ND4LP03901 98 aa14.14□□□□□ -0.15
SEC13-217ENST00000482647 COMMD7Q86VX2 200 aa14.14□□□□□ -0.15
SEC13-217ENST00000482647 IBA57-AS1B1ANH7 110 aa14.13□□□□□ -0.15
SEC13-217ENST00000482647 A0A1B0GW15 77 aa14.12□□□□□ -0.15
SEC13-217ENST00000482647 F8W036 122 aa14.12□□□□□ -0.15
SEC13-217ENST00000482647 TNP2Q05952 138 aa14.12□□□□□ -0.15
SEC13-217ENST00000482647 KCNIP4Q6PIL6 250 aa14.12□□□□□ -0.15
SEC13-217ENST00000482647 NIT1Q86X76 327 aa14.12□□□□□ -0.15
SEC13-217ENST00000482647 ANAPC16Q96DE5 110 aa14.12□□□□□ -0.15
SEC13-217ENST00000482647 A0A087WX48 190 aa14.11□□□□□ -0.15
SEC13-217ENST00000482647 A0A1B0GVY2 172 aa14.1□□□□□ -0.15
SEC13-217ENST00000482647 LINC00862A6NCI5 91 aa14.1□□□□□ -0.15
SEC13-217ENST00000482647 TMEM262E9PQX1 116 aa14.1□□□□□ -0.15
SEC13-217ENST00000482647 RAB4AP20338 218 aa14.1□□□□□ -0.15
SEC13-217ENST00000482647 CAMPP49913 170 aa14.1□□□□□ -0.15
SEC13-217ENST00000482647 Q6ZRN7 208 aaPredicted RBP14.1□□□□□ -0.15
SEC13-217ENST00000482647 NTM-AS1Q6ZSK4 140 aa14.1□□□□□ -0.15
SEC13-217ENST00000482647 Q8N3U1 123 aa14.1□□□□□ -0.15
SEC13-217ENST00000482647 CHCHD5Q9BSY4 110 aa14.1□□□□□ -0.15
SEC13-217ENST00000482647 CHCHD7Q9BUK0 85 aa14.1□□□□□ -0.15
SEC13-217ENST00000482647 TRBV25-1A0A075B6N4 114 aa14.09□□□□□ -0.15
SEC13-217ENST00000482647 S100A8P05109 93 aa14.09□□□□□ -0.15
SEC13-217ENST00000482647 PKIAP61925 76 aa14.09□□□□□ -0.15
SEC13-217ENST00000482647 LAGE3Q14657 143 aa14.09□□□□□ -0.15
SEC13-217ENST00000482647 AMN1Q8IY45 258 aa14.09□□□□□ -0.15
SEC13-217ENST00000482647 RPL39LQ96EH5 51 aaKnown RBP14.09□□□□□ -0.15
SEC13-217ENST00000482647 MRAP2Q96G30 205 aa14.09□□□□□ -0.15
SEC13-217ENST00000482647 RNF185Q96GF1 192 aa14.09□□□□□ -0.15
SEC13-217ENST00000482647 IGHV1-24A0A0C4DH33 117 aa14.08□□□□□ -0.16
SEC13-217ENST00000482647 ADCYAP1P18509 176 aa14.08□□□□□ -0.16
SEC13-217ENST00000482647 IQCJQ1A5X6 159 aa14.08□□□□□ -0.16
SEC13-217ENST00000482647 SEC11CQ9BY50 192 aa14.08□□□□□ -0.16
SEC13-217ENST00000482647 PKD1P98161 4303 aa14.07□□□□□ -0.16
SEC13-217ENST00000482647 ELOBQ15370 118 aa14.07□□□□□ -0.16
SEC13-217ENST00000482647 MRPL54Q6P161 138 aaKnown RBP14.07□□□□□ -0.16
SEC13-217ENST00000482647 HBBP68871 147 aa14.06□□□□□ -0.16
SEC13-217ENST00000482647 COTL1Q14019 142 aa14.06□□□□□ -0.16
SEC13-217ENST00000482647 TRAV8-3A0A0A6YYJ7 113 aa14.05□□□□□ -0.16
SEC13-217ENST00000482647 TRBV6-5A0A0K0K1A5 114 aa14.05□□□□□ -0.16
SEC13-217ENST00000482647 FAM104BQ5XKR9 115 aa14.05□□□□□ -0.16
SEC13-217ENST00000482647 ATP5L2Q7Z4Y8 100 aa14.05□□□□□ -0.16
SEC13-217ENST00000482647 Q9HAA7 133 aa14.05□□□□□ -0.16
SEC13-217ENST00000482647 PPP1R17O96001 155 aa14.04□□□□□ -0.16
SEC13-217ENST00000482647 ST20Q9HBF5 79 aa14.04□□□□□ -0.16
SEC13-217ENST00000482647 DNAH11Q96DT5 4516 aa14.03□□□□□ -0.16
SEC13-217ENST00000482647 A0A1B0GXF2 115 aa14.03□□□□□ -0.16
SEC13-217ENST00000482647 SDHAF1A6NFY7 115 aa14.03□□□□□ -0.16
SEC13-217ENST00000482647 GAS8-AS1O95177 125 aa14.03□□□□□ -0.16
SEC13-217ENST00000482647 TMEM243Q9BU79 118 aa14.03□□□□□ -0.16
SEC13-217ENST00000482647 KLK12Q9UKR0 248 aa14.03□□□□□ -0.16
SEC13-217ENST00000482647 PSCAO43653 123 aa14.02□□□□□ -0.17
SEC13-217ENST00000482647 GAGE6Q13070 117 aa14.02□□□□□ -0.17
SEC13-217ENST00000482647 MPV17L2Q567V2 206 aa14.02□□□□□ -0.17
SEC13-217ENST00000482647 ATRAIDQ6UW56 229 aa14.02□□□□□ -0.17
SEC13-217ENST00000482647 DEFB104AQ8WTQ1 72 aa14.02□□□□□ -0.17
SEC13-217ENST00000482647 TM2D2Q9BX73 214 aa14.02□□□□□ -0.17
SEC13-217ENST00000482647 CTDSP1Q9GZU7 261 aa14.02□□□□□ -0.17
SEC13-217ENST00000482647 PKHD1P08F94 4074 aa14.02□□□□□ -0.17
SEC13-217ENST00000482647 I3L3M4 83 aa14.01□□□□□ -0.17
SEC13-217ENST00000482647 NCR2O95944 276 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms