RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 TMEM242Q9NWH2 141 aa9.19□□□□□ -0.94
HDAC1-208ENST00000482310 TGIF2-C20orf24A0A0A6YYL0 155 aa9.18□□□□□ -0.94
HDAC1-208ENST00000482310 IGHV3-38A0A0C4DH36 116 aa9.18□□□□□ -0.94
HDAC1-208ENST00000482310 A0A1B0GW15 77 aa9.18□□□□□ -0.94
HDAC1-208ENST00000482310 GAS8-AS1O95177 125 aa9.18□□□□□ -0.94
HDAC1-208ENST00000482310 S100A8P05109 93 aa9.18□□□□□ -0.94
HDAC1-208ENST00000482310 GATD1Q8NB37 220 aa9.18□□□□□ -0.94
HDAC1-208ENST00000482310 DEFB104AQ8WTQ1 72 aa9.18□□□□□ -0.94
HDAC1-208ENST00000482310 RPL39LQ96EH5 51 aaKnown RBP9.18□□□□□ -0.94
HDAC1-208ENST00000482310 RNF185Q96GF1 192 aa9.18□□□□□ -0.94
HDAC1-208ENST00000482310 H3BNG1 76 aa9.17□□□□□ -0.94
HDAC1-208ENST00000482310 H7C1H1 209 aa9.17□□□□□ -0.94
HDAC1-208ENST00000482310 M0QY20 66 aa9.17□□□□□ -0.94
HDAC1-208ENST00000482310 ATP6V1G1O75348 118 aa9.17□□□□□ -0.94
HDAC1-208ENST00000482310 LY6G6CO95867 125 aa9.17□□□□□ -0.94
HDAC1-208ENST00000482310 RAB4AP20338 218 aa9.17□□□□□ -0.94
HDAC1-208ENST00000482310 RPL36AP83881 106 aaKnown RBP9.17□□□□□ -0.94
HDAC1-208ENST00000482310 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
HDAC1-208ENST00000482310 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
HDAC1-208ENST00000482310 RPL36ALQ969Q0 106 aaKnown RBP9.17□□□□□ -0.94
HDAC1-208ENST00000482310 HYDINQ4G0P3 5121 aa9.17□□□□□ -0.94
HDAC1-208ENST00000482310 SCO1O75880 301 aa9.16□□□□□ -0.94
HDAC1-208ENST00000482310 TCTAP57738 103 aa9.16□□□□□ -0.94
HDAC1-208ENST00000482310 FAM104BQ5XKR9 115 aa9.16□□□□□ -0.94
HDAC1-208ENST00000482310 NEGR1Q7Z3B1 354 aa9.16□□□□□ -0.94
HDAC1-208ENST00000482310 TNFRSF18Q9Y5U5 241 aa9.16□□□□□ -0.94
HDAC1-208ENST00000482310 TRBV7-3A0A075B6L6 115 aa9.15□□□□□ -0.94
HDAC1-208ENST00000482310 TRBV10-1A0A0K0K1A3 114 aa9.15□□□□□ -0.94
HDAC1-208ENST00000482310 RPS10P46783 165 aaKnown RBP9.15□□□□□ -0.94
HDAC1-208ENST00000482310 ELOBQ15370 118 aa9.15□□□□□ -0.94
HDAC1-208ENST00000482310 ESRGQ1W209 222 aa9.15□□□□□ -0.94
HDAC1-208ENST00000482310 OR10J3Q5JRS4 329 aa9.15□□□□□ -0.94
HDAC1-208ENST00000482310 ATP6V0E2Q8NHE4 81 aa9.15□□□□□ -0.94
HDAC1-208ENST00000482310 TRAV9-1A0A075B6T8 112 aa9.14□□□□□ -0.95
HDAC1-208ENST00000482310 D6R8Y8 96 aa9.14□□□□□ -0.95
HDAC1-208ENST00000482310 CKS2P33552 79 aa9.14□□□□□ -0.95
HDAC1-208ENST00000482310 CCL18P55774 89 aa9.14□□□□□ -0.95
HDAC1-208ENST00000482310 TMEM136Q6ZRR5 245 aa9.14□□□□□ -0.95
HDAC1-208ENST00000482310 MRAP2Q96G30 205 aa9.14□□□□□ -0.95
HDAC1-208ENST00000482310 SMCO4Q9NRQ5 59 aa9.14□□□□□ -0.95
HDAC1-208ENST00000482310 LINC00588Q9Y4M8 146 aa9.14□□□□□ -0.95
HDAC1-208ENST00000482310 LINC00694P0DN24 101 aa9.13□□□□□ -0.95
HDAC1-208ENST00000482310 UBE2D3P61077 147 aa9.13□□□□□ -0.95
HDAC1-208ENST00000482310 UBE2D2P62837 147 aa9.13□□□□□ -0.95
HDAC1-208ENST00000482310 LYPD5Q6UWN5 251 aa9.13□□□□□ -0.95
HDAC1-208ENST00000482310 LINC00476Q8WZB0 136 aa9.13□□□□□ -0.95
HDAC1-208ENST00000482310 NIT2Q9NQR4 276 aa9.13□□□□□ -0.95
HDAC1-208ENST00000482310 VPS13DQ5THJ4 4388 aa9.13□□□□□ -0.95
HDAC1-208ENST00000482310 KIAA1644Q3SXP7 199 aa9.12□□□□□ -0.95
HDAC1-208ENST00000482310 FRZBQ92765 325 aa9.12□□□□□ -0.95
HDAC1-208ENST00000482310 GTSF1LQ9H1H1 148 aa9.12□□□□□ -0.95
HDAC1-208ENST00000482310 LCE6AA0A183 80 aa9.11□□□□□ -0.95
HDAC1-208ENST00000482310 APCSP02743 223 aa9.11□□□□□ -0.95
HDAC1-208ENST00000482310 SH2D6Q7Z4S9 175 aa9.11□□□□□ -0.95
HDAC1-208ENST00000482310 DNAJC30Q96LL9 226 aa9.11□□□□□ -0.95
HDAC1-208ENST00000482310 ST20Q9HBF5 79 aa9.11□□□□□ -0.95
HDAC1-208ENST00000482310 IGLV2-18A0A075B6J9 118 aa9.1□□□□□ -0.95
HDAC1-208ENST00000482310 NPYP01303 97 aa9.1□□□□□ -0.95
HDAC1-208ENST00000482310 HLA-DQA1P01909 254 aa9.1□□□□□ -0.95
HDAC1-208ENST00000482310 LGALS9CQ6DKI2 356 aa9.1□□□□□ -0.95
HDAC1-208ENST00000482310 NRACQ8N912 160 aa9.1□□□□□ -0.95
HDAC1-208ENST00000482310 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.1□□□□□ -0.95
HDAC1-208ENST00000482310 PRELID3AQ96N28 172 aa9.1□□□□□ -0.95
HDAC1-208ENST00000482310 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
HDAC1-208ENST00000482310 TRBV24-1A0A075B6N3 115 aa9.09□□□□□ -0.95
HDAC1-208ENST00000482310 SDHAF1A6NFY7 115 aa9.09□□□□□ -0.95
HDAC1-208ENST00000482310 TNFRSF6BO95407 300 aa9.09□□□□□ -0.95
HDAC1-208ENST00000482310 FABP9Q0Z7S8 132 aa9.09□□□□□ -0.95
HDAC1-208ENST00000482310 WFDC10BQ8IUB3 73 aa9.09□□□□□ -0.95
HDAC1-208ENST00000482310 ORMDL3Q8N138 153 aa9.09□□□□□ -0.95
HDAC1-208ENST00000482310 YPEL4Q96NS1 127 aa9.09□□□□□ -0.95
HDAC1-208ENST00000482310 GNB1LQ9BYB4 327 aa9.09□□□□□ -0.95
HDAC1-208ENST00000482310 MRPS16Q9Y3D3 137 aaKnown RBP9.09□□□□□ -0.95
HDAC1-208ENST00000482310 TRAPPC1Q9Y5R8 145 aa9.09□□□□□ -0.95
HDAC1-208ENST00000482310 LOC389332A0A1B0GUA5 103 aa9.08□□□□□ -0.96
HDAC1-208ENST00000482310 PMCHP20382 165 aa9.08□□□□□ -0.96
HDAC1-208ENST00000482310 S100A1P23297 94 aa9.08□□□□□ -0.96
HDAC1-208ENST00000482310 DAZ4Q86SG3 579 aaKnown RBP9.08□□□□□ -0.96
HDAC1-208ENST00000482310 DAZ3Q9NR90 486 aaKnown RBP9.08□□□□□ -0.96
HDAC1-208ENST00000482310 M0R2N4 97 aa9.07□□□□□ -0.96
HDAC1-208ENST00000482310 SUMO2P61956 95 aaKnown RBP9.07□□□□□ -0.96
HDAC1-208ENST00000482310 COX19Q49B96 90 aa9.07□□□□□ -0.96
HDAC1-208ENST00000482310 LELP1Q5T871 98 aa9.07□□□□□ -0.96
HDAC1-208ENST00000482310 TMEM70Q9BUB7 260 aa9.07□□□□□ -0.96
HDAC1-208ENST00000482310 KRTAP17-1Q9BYP8 105 aa9.07□□□□□ -0.96
HDAC1-208ENST00000482310 DNAH6Q9C0G6 4158 aa9.06□□□□□ -0.96
HDAC1-208ENST00000482310 TRAV8-6A0A0B4J262 113 aa9.06□□□□□ -0.96
HDAC1-208ENST00000482310 PPBPP02775 128 aa9.06□□□□□ -0.96
HDAC1-208ENST00000482310 MT-ND6P03923 174 aa9.06□□□□□ -0.96
HDAC1-208ENST00000482310 COTL1Q14019 142 aa9.06□□□□□ -0.96
HDAC1-208ENST00000482310 NTM-AS1Q6ZSK4 140 aa9.06□□□□□ -0.96
HDAC1-208ENST00000482310 Q8N3U1 123 aa9.06□□□□□ -0.96
HDAC1-208ENST00000482310 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
HDAC1-208ENST00000482310 TRBV6-5A0A0K0K1A5 114 aa9.05□□□□□ -0.96
HDAC1-208ENST00000482310 I3L3M4 83 aa9.05□□□□□ -0.96
HDAC1-208ENST00000482310 PPP1R17O96001 155 aa9.05□□□□□ -0.96
HDAC1-208ENST00000482310 IGHV3-30P01768 117 aa9.05□□□□□ -0.96
HDAC1-208ENST00000482310 IGHV3-33P01772 117 aa9.05□□□□□ -0.96
HDAC1-208ENST00000482310 IGHV3-30-3P0DP02 117 aa9.05□□□□□ -0.96
HDAC1-208ENST00000482310 IGHV3-30-5P0DP03 117 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms