RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 UBE2D3P61077 147 aa18.34■□□□□ 0.53
CCM2-211ENST00000478582 UBE2D2P62837 147 aa18.34■□□□□ 0.53
CCM2-211ENST00000478582 Q6ZR54 194 aa18.34■□□□□ 0.53
CCM2-211ENST00000478582 IGLV2-18A0A075B6J9 118 aa18.33■□□□□ 0.52
CCM2-211ENST00000478582 LINC00336Q6ZUF6 198 aa18.33■□□□□ 0.52
CCM2-211ENST00000478582 TMEM191AQ9H0A3 160 aa18.33■□□□□ 0.52
CCM2-211ENST00000478582 DNAJC30Q96LL9 226 aa18.32■□□□□ 0.52
CCM2-211ENST00000478582 SIVA1O15304 175 aa18.31■□□□□ 0.52
CCM2-211ENST00000478582 LELP1Q5T871 98 aa18.31■□□□□ 0.52
CCM2-211ENST00000478582 RASL11AQ6T310 242 aa18.31■□□□□ 0.52
CCM2-211ENST00000478582 CARHSP1Q9Y2V2 147 aaKnown RBP18.31■□□□□ 0.52
CCM2-211ENST00000478582 NBDYA0A0U1RRE5 68 aa18.3■□□□□ 0.52
CCM2-211ENST00000478582 A0A1B0GW15 77 aa18.3■□□□□ 0.52
CCM2-211ENST00000478582 FRZBQ92765 325 aa18.3■□□□□ 0.52
CCM2-211ENST00000478582 A0A087WWC5 75 aa18.29■□□□□ 0.52
CCM2-211ENST00000478582 GATD1Q8NB37 220 aa18.28■□□□□ 0.52
CCM2-211ENST00000478582 NIT2Q9NQR4 276 aa18.28■□□□□ 0.52
CCM2-211ENST00000478582 TRAV8-6A0A0B4J262 113 aa18.27■□□□□ 0.52
CCM2-211ENST00000478582 WFDC10BQ8IUB3 73 aa18.27■□□□□ 0.52
CCM2-211ENST00000478582 CTDSP1Q9GZU7 261 aa18.27■□□□□ 0.52
CCM2-211ENST00000478582 TNFRSF18Q9Y5U5 241 aa18.27■□□□□ 0.52
CCM2-211ENST00000478582 RTL8CO15255 209 aa18.26■□□□□ 0.51
CCM2-211ENST00000478582 A0A1B0GXF2 115 aa18.25■□□□□ 0.51
CCM2-211ENST00000478582 DNAH10OSP0CZ25 163 aa18.25■□□□□ 0.51
CCM2-211ENST00000478582 TTC32Q5I0X7 151 aa18.25■□□□□ 0.51
CCM2-211ENST00000478582 OR10J3Q5JRS4 329 aa18.25■□□□□ 0.51
CCM2-211ENST00000478582 DAZ4Q86SG3 579 aaKnown RBP18.25■□□□□ 0.51
CCM2-211ENST00000478582 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.25■□□□□ 0.51
CCM2-211ENST00000478582 RNF185Q96GF1 192 aa18.25■□□□□ 0.51
CCM2-211ENST00000478582 DAZ3Q9NR90 486 aaKnown RBP18.25■□□□□ 0.51
CCM2-211ENST00000478582 TRAV26-2A0A0B4J265 109 aa18.24■□□□□ 0.51
CCM2-211ENST00000478582 RAB4AP20338 218 aa18.24■□□□□ 0.51
CCM2-211ENST00000478582 ATP5L2Q7Z4Y8 100 aa18.24■□□□□ 0.51
CCM2-211ENST00000478582 IMMP2LQ96T52 175 aa18.24■□□□□ 0.51
CCM2-211ENST00000478582 K7EP13 123 aa18.23■□□□□ 0.51
CCM2-211ENST00000478582 S100A8P05109 93 aa18.23■□□□□ 0.51
CCM2-211ENST00000478582 HBBP68871 147 aa18.23■□□□□ 0.51
CCM2-211ENST00000478582 DNAH2Q9P225 4427 aa18.22■□□□□ 0.51
CCM2-211ENST00000478582 IGHV3-38A0A0C4DH36 116 aa18.22■□□□□ 0.51
CCM2-211ENST00000478582 CAMPP49913 170 aa18.22■□□□□ 0.51
CCM2-211ENST00000478582 MRPL54Q6P161 138 aaKnown RBP18.22■□□□□ 0.51
CCM2-211ENST00000478582 AMN1Q8IY45 258 aa18.22■□□□□ 0.51
CCM2-211ENST00000478582 PRSS29PA6NIE9 313 aa18.21■□□□□ 0.51
CCM2-211ENST00000478582 TMEM97Q5BJF2 176 aa18.21■□□□□ 0.51
CCM2-211ENST00000478582 FAM104BQ5XKR9 115 aa18.21■□□□□ 0.51
CCM2-211ENST00000478582 MRAP2Q96G30 205 aa18.21■□□□□ 0.51
CCM2-211ENST00000478582 KRTAP1-5Q9BYS1 174 aa18.21■□□□□ 0.51
CCM2-211ENST00000478582 TMEM242Q9NWH2 141 aa18.21■□□□□ 0.51
CCM2-211ENST00000478582 CLRN3Q8NCR9 226 aa18.2■□□□□ 0.5
CCM2-211ENST00000478582 DNAH17Q9UFH2 4485 aa18.19■□□□□ 0.5
CCM2-211ENST00000478582 TRAV9-2A0A087WT02 112 aa18.19■□□□□ 0.5
CCM2-211ENST00000478582 TRBV6-8A0A0A6YYG3 113 aa18.19■□□□□ 0.5
CCM2-211ENST00000478582 BTF3P20290 206 aaKnown RBP18.19■□□□□ 0.5
CCM2-211ENST00000478582 LINC01556Q5JQF7 62 aa18.19■□□□□ 0.5
CCM2-211ENST00000478582 C1orf134Q5TEV5 83 aa18.19■□□□□ 0.5
CCM2-211ENST00000478582 TRBV6-5A0A0K0K1A5 114 aa18.18■□□□□ 0.5
CCM2-211ENST00000478582 A0A1B0GVY2 172 aa18.18■□□□□ 0.5
CCM2-211ENST00000478582 C7orf77A4D0Y5 90 aa18.18■□□□□ 0.5
CCM2-211ENST00000478582 RHEBQ15382 184 aa18.18■□□□□ 0.5
CCM2-211ENST00000478582 RPL39LQ96EH5 51 aaKnown RBP18.18■□□□□ 0.5
CCM2-211ENST00000478582 BTF3L4Q96K17 158 aa18.18■□□□□ 0.5
CCM2-211ENST00000478582 FAT2Q9NYQ8 4349 aa18.16■□□□□ 0.5
CCM2-211ENST00000478582 NTM-AS1Q6ZSK4 140 aa18.16■□□□□ 0.5
CCM2-211ENST00000478582 HECTD4Q9Y4D8 3996 aa18.15■□□□□ 0.5
CCM2-211ENST00000478582 GAS8-AS1O95177 125 aa18.15■□□□□ 0.5
CCM2-211ENST00000478582 NDUFA5Q16718 116 aa18.15■□□□□ 0.5
CCM2-211ENST00000478582 MRPL51Q4U2R6 128 aaKnown RBP18.15■□□□□ 0.5
CCM2-211ENST00000478582 KCNIP4Q6PIL6 250 aa18.15■□□□□ 0.5
CCM2-211ENST00000478582 TRAV9-1A0A075B6T8 112 aa18.14■□□□□ 0.49
CCM2-211ENST00000478582 APOC3P02656 99 aa18.14■□□□□ 0.49
CCM2-211ENST00000478582 C6orf223Q8N319 242 aa18.14■□□□□ 0.49
CCM2-211ENST00000478582 C10orf126Q8N4M7 172 aa18.14■□□□□ 0.49
CCM2-211ENST00000478582 PPP1R17O96001 155 aa18.13■□□□□ 0.49
CCM2-211ENST00000478582 NIT1Q86X76 327 aa18.13■□□□□ 0.49
CCM2-211ENST00000478582 SVBPQ8N300 66 aa18.13■□□□□ 0.49
CCM2-211ENST00000478582 RPS10P46783 165 aaKnown RBP18.12■□□□□ 0.49
CCM2-211ENST00000478582 IQCJQ1A5X6 159 aa18.12■□□□□ 0.49
CCM2-211ENST00000478582 RPS10P5Q9NQ39 176 aa18.12■□□□□ 0.49
CCM2-211ENST00000478582 SDHAF1A6NFY7 115 aa18.11■□□□□ 0.49
CCM2-211ENST00000478582 TRBV25-1A0A075B6N4 114 aa18.1■□□□□ 0.49
CCM2-211ENST00000478582 SMKR1H3BMG3 65 aa18.1■□□□□ 0.49
CCM2-211ENST00000478582 SNAPINO95295 136 aa18.1■□□□□ 0.49
CCM2-211ENST00000478582 SLC7A5P1Q8MH63 180 aa18.1■□□□□ 0.49
CCM2-211ENST00000478582 NRACQ8N912 160 aa18.1■□□□□ 0.49
CCM2-211ENST00000478582 CHCHD7Q9BUK0 85 aa18.1■□□□□ 0.49
CCM2-211ENST00000478582 ST20Q9HBF5 79 aa18.1■□□□□ 0.49
CCM2-211ENST00000478582 IGHV1-24A0A0C4DH33 117 aa18.09■□□□□ 0.49
CCM2-211ENST00000478582 NCR2O95944 276 aa18.09■□□□□ 0.49
CCM2-211ENST00000478582 IGHV3-30P01768 117 aa18.09■□□□□ 0.49
CCM2-211ENST00000478582 IGHV3-33P01772 117 aa18.09■□□□□ 0.49
CCM2-211ENST00000478582 IGHV3-30-3P0DP02 117 aa18.09■□□□□ 0.49
CCM2-211ENST00000478582 IGHV3-30-5P0DP03 117 aa18.09■□□□□ 0.49
CCM2-211ENST00000478582 S100PP25815 95 aa18.09■□□□□ 0.49
CCM2-211ENST00000478582 COTL1Q14019 142 aa18.09■□□□□ 0.49
CCM2-211ENST00000478582 IBA57-AS1B1ANH7 110 aa18.08■□□□□ 0.48
CCM2-211ENST00000478582 CKS2P33552 79 aa18.08■□□□□ 0.48
CCM2-211ENST00000478582 POLR2KP53803 58 aaKnown RBP18.08■□□□□ 0.48
CCM2-211ENST00000478582 TMEM70Q9BUB7 260 aa18.08■□□□□ 0.48
CCM2-211ENST00000478582 PPBPP02775 128 aa18.07■□□□□ 0.48
CCM2-211ENST00000478582 PKIAP61925 76 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms