RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 MITD1Q8WV92 249 aa4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 DIRC1Q969H9 104 aa4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 TPPP3Q9BW30 176 aa4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 RSL24D1Q9UHA3 163 aaKnown RBP4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 IGSF23A1L1A6 192 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 H0Y9J4 135 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 GNG5P63218 68 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 ATP6V1FQ16864 119 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 HIGD2BQ4VC39 106 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 C1orf137Q5JT78 98 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 SUMO4Q6EEV6 95 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 TMEM252Q8N6L7 170 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 SUN5Q8TC36 379 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 NDFIP1Q9BT67 221 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 VCX3AQ9NNX9 186 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 MBD2Q9UBB5 411 aa4.36□□□□□ -1.71
SPTLC1-205ENST00000477888 IGLV4-60A0A075B6I1 120 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 A0A087WXM4 84 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 TRAV1-1A0A0B4J248 108 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 A0A1B0GUV1 79 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 A0A1W2PNN7 141 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 H3BVH4 76 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 TSPAN13O95857 204 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 MT-ND6P03923 174 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 IGLV7-43P04211 117 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 FOXI1Q12951 378 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 SMUG1Q53HV7 270 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 FAM74A1Q5RGS3 127 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 DNLZQ5SXM8 178 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 TOMM5Q8N4H5 51 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 OR11H4Q8NGC9 324 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 THAP6Q8TBB0 222 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 PSG8Q9UQ74 426 aa4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 LSM5Q9Y4Y9 91 aaKnown RBP4.35□□□□□ -1.71
SPTLC1-205ENST00000477888 TRAV6A0A075B6T7 132 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 GVQW2A0A096LPI5 108 aaPredicted RBP4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 TRBV6-1A0A0K0K1D8 114 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 F8WDY8 70 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 RPL13AP40429 203 aaKnown RBP4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 AP3S2P59780 193 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 RAB2AP61019 212 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 HBG1P69891 147 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 HBG2P69892 147 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 IQCJQ1A5X6 159 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 TMEM97Q5BJF2 176 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 DEDD2Q8WXF8 326 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 DERL1Q9BUN8 251 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 NDUFA13Q9P0J0 144 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 FLVCR2Q9UPI3 526 aa4.34□□□□□ -1.71
SPTLC1-205ENST00000477888 TRBV25-1A0A075B6N4 114 aa4.33□□□□□ -1.72
SPTLC1-205ENST00000477888 SERTM2A0A1B0GWG4 89 aa4.33□□□□□ -1.72
SPTLC1-205ENST00000477888 EIF3GO75821 320 aaKnown RBP eCLIP4.33□□□□□ -1.72
SPTLC1-205ENST00000477888 TCRAP04437 139 aa4.33□□□□□ -1.72
SPTLC1-205ENST00000477888 RAB4BP61018 213 aa4.33□□□□□ -1.72
SPTLC1-205ENST00000477888 KHDC3LQ587J8 217 aa4.33□□□□□ -1.72
SPTLC1-205ENST00000477888 STX12Q86Y82 276 aa4.33□□□□□ -1.72
SPTLC1-205ENST00000477888 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.33□□□□□ -1.72
SPTLC1-205ENST00000477888 FABP5P3A8MUU1 101 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 KRBOX1C9JBD0 128 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 AMTP48728 403 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 UBE2D1P51668 147 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 TAS2R45P59539 299 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 FLI1Q01543 452 aaPredicted RBP4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 ZFP69Q49AA0 526 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 SAPCD1Q5SSQ6 148 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 PRNTQ86SH4 94 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 OR5C1Q8NGR4 320 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 AQP10Q96PS8 301 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 WDR61Q9GZS3 305 aaKnown RBP4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 PKIGQ9Y2B9 76 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 PHLDA3Q9Y5J5 127 aa4.32□□□□□ -1.72
SPTLC1-205ENST00000477888 IGHV1-24A0A0C4DH33 117 aa4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 B4DEV8 164 aa4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 M0R381 172 aa4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 NDUFB6O95139 128 aa4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 PVALBP20472 110 aaPredicted RBP4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 CRIP1P50238 77 aa4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 CYCSP99999 105 aaKnown RBP4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 IL15RAQ13261 267 aa4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 SPCS2Q15005 226 aa4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 KCNIP2Q9NS61 270 aa4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 CARHSP1Q9Y2V2 147 aaKnown RBP4.31□□□□□ -1.72
SPTLC1-205ENST00000477888 GRIFINA4D1Z8 144 aa4.3□□□□□ -1.72
SPTLC1-205ENST00000477888 SULT1A2P50226 295 aa4.3□□□□□ -1.72
SPTLC1-205ENST00000477888 SEC61BP60468 96 aaKnown RBP4.3□□□□□ -1.72
SPTLC1-205ENST00000477888 PNRC1Q12796 327 aaPredicted RBP4.3□□□□□ -1.72
SPTLC1-205ENST00000477888 C9orf116Q5BN46 136 aaPredicted RBP4.3□□□□□ -1.72
SPTLC1-205ENST00000477888 PHF5AQ7RTV0 110 aaKnown RBP4.3□□□□□ -1.72
SPTLC1-205ENST00000477888 KRTAP11-1Q8IUC1 163 aa4.3□□□□□ -1.72
SPTLC1-205ENST00000477888 ZFP82Q8N141 532 aa4.3□□□□□ -1.72
SPTLC1-205ENST00000477888 C5orf17Q8NAS9 161 aa4.3□□□□□ -1.72
SPTLC1-205ENST00000477888 LINC00526Q96FQ7 95 aa4.3□□□□□ -1.72
SPTLC1-205ENST00000477888 FAM25EA8MYX2 175 aa4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 C17orf112F2Z3M2 114 aa4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 K7EQM0 130 aa4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 M0R036 132 aa4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 TPT1P13693 172 aaKnown RBP4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 SSTP61278 116 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms