RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CCL8P80075 99 aa1.87□□□□□ -2.11
SMC5-203ENST00000475540 ZNF818PQ6ZRF7 136 aa1.87□□□□□ -2.11
SMC5-203ENST00000475540 C5orf38Q86SI9 138 aa1.87□□□□□ -2.11
SMC5-203ENST00000475540 SPAG17Q6Q759 2223 aa1.86□□□□□ -2.11
SMC5-203ENST00000475540 CPSF1Q10570 1443 aaKnown RBP1.86□□□□□ -2.11
SMC5-203ENST00000475540 SPINK8P0C7L1 97 aa1.86□□□□□ -2.11
SMC5-203ENST00000475540 ATP5EP56381 51 aaPredicted RBP1.86□□□□□ -2.11
SMC5-203ENST00000475540 C5orf56Q8N8D9 126 aa1.86□□□□□ -2.11
SMC5-203ENST00000475540 CACNA1BQ00975 2339 aa1.86□□□□□ -2.11
SMC5-203ENST00000475540 TRAV13-2A0A0B4J235 113 aa1.85□□□□□ -2.11
SMC5-203ENST00000475540 SSSCA1O60232 199 aa1.85□□□□□ -2.11
SMC5-203ENST00000475540 CAV3P56539 151 aa1.85□□□□□ -2.11
SMC5-203ENST00000475540 LINC00575Q6W349 94 aa1.85□□□□□ -2.11
SMC5-203ENST00000475540 NWD2Q9ULI1 1742 aa1.85□□□□□ -2.11
SMC5-203ENST00000475540 UBE2L5PA0A1B0GUS4 154 aa1.84□□□□□ -2.11
SMC5-203ENST00000475540 UBE2D1P51668 147 aa1.84□□□□□ -2.11
SMC5-203ENST00000475540 UBE2L3P68036 154 aaKnown RBP1.84□□□□□ -2.11
SMC5-203ENST00000475540 BET1LQ9NYM9 111 aa1.84□□□□□ -2.11
SMC5-203ENST00000475540 TNRC18O15417 2968 aaPredicted RBP1.84□□□□□ -2.12
SMC5-203ENST00000475540 PCNTO95613 3336 aa1.83□□□□□ -2.12
SMC5-203ENST00000475540 IQSEC2Q5JU85 1478 aa1.83□□□□□ -2.12
SMC5-203ENST00000475540 SETXQ7Z333 2677 aaKnown RBP1.83□□□□□ -2.12
SMC5-203ENST00000475540 SIX6O95475 246 aa1.83□□□□□ -2.12
SMC5-203ENST00000475540 ZNF56Q15929 161 aa1.83□□□□□ -2.12
SMC5-203ENST00000475540 COMMD6Q7Z4G1 85 aa1.83□□□□□ -2.12
SMC5-203ENST00000475540 TTC9CQ8N5M4 171 aa1.83□□□□□ -2.12
SMC5-203ENST00000475540 CCL19Q99731 98 aa1.83□□□□□ -2.12
SMC5-203ENST00000475540 CITO14578 2027 aa1.83□□□□□ -2.12
SMC5-203ENST00000475540 HCG22E2RYF7 251 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 M0R143 59 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 FXYD1O00168 92 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 LYNX1P0DP58 116 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 CCL3L1P16619 93 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 EFNA4P52798 201 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 DCDP81605 110 aaKnown RBP1.82□□□□□ -2.12
SMC5-203ENST00000475540 SSBP1Q04837 148 aaKnown RBP1.82□□□□□ -2.12
SMC5-203ENST00000475540 KLKP1Q107X0 134 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 FAM74A4Q5TZK3 123 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 Q86TA4 180 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 C20orf197Q8N268 126 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 LINC00208Q96KT6 92 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 CASKIN1Q8WXD9 1431 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 PDE4DIPQ5VU43 2346 aa1.82□□□□□ -2.12
SMC5-203ENST00000475540 ROBO1Q9Y6N7 1651 aa1.81□□□□□ -2.12
SMC5-203ENST00000475540 NRXN2Q9P2S2 1712 aa1.81□□□□□ -2.12
SMC5-203ENST00000475540 KIAA0100Q14667 2235 aaKnown RBP1.81□□□□□ -2.12
SMC5-203ENST00000475540 TRBV30A0A0K0K1B3 111 aa1.81□□□□□ -2.12
SMC5-203ENST00000475540 RBAKDNA6NC62 111 aa1.81□□□□□ -2.12
SMC5-203ENST00000475540 TMEM262E9PQX1 116 aa1.81□□□□□ -2.12
SMC5-203ENST00000475540 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
SMC5-203ENST00000475540 Q6ZSA8 131 aa1.81□□□□□ -2.12
SMC5-203ENST00000475540 CHD8Q9HCK8 2581 aa1.81□□□□□ -2.12
SMC5-203ENST00000475540 NESP48681 1621 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 SPHKAPQ2M3C7 1700 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 ZNF462Q96JM2 2506 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 AFDNP55196 1824 aaKnown RBP1.8□□□□□ -2.12
SMC5-203ENST00000475540 MAST4O15021 2626 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 TRBV7-1A0A0A6YYK4 115 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 COX7B2Q8TF08 81 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 CYP4F30PQ9H0H9 118 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 DPH3P1Q9H4G8 78 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 C10orf71Q711Q0 1435 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 HMGXB3Q12766 1538 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 USP24Q9UPU5 2620 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 TOP2BQ02880 1626 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 RAPGEF6Q8TEU7 1601 aa1.8□□□□□ -2.12
SMC5-203ENST00000475540 H3BQ15 152 aa1.79□□□□□ -2.12
SMC5-203ENST00000475540 S100A10P60903 97 aa1.79□□□□□ -2.12
SMC5-203ENST00000475540 C10orf99Q6UWK7 81 aa1.79□□□□□ -2.12
SMC5-203ENST00000475540 LINC00312Q9Y6C7 94 aa1.79□□□□□ -2.12
SMC5-203ENST00000475540 ARAP2Q8WZ64 1704 aa1.79□□□□□ -2.12
SMC5-203ENST00000475540 TECTAO75443 2155 aa1.78□□□□□ -2.12
SMC5-203ENST00000475540 SNRNP200O75643 2136 aaKnown RBP1.78□□□□□ -2.12
SMC5-203ENST00000475540 DLG5Q8TDM6 1919 aa1.78□□□□□ -2.12
SMC5-203ENST00000475540 TNS1Q9HBL0 1735 aaKnown RBP1.78□□□□□ -2.12
SMC5-203ENST00000475540 LRRC37A3O60309 1634 aa1.78□□□□□ -2.12
SMC5-203ENST00000475540 ARHGAP5Q13017 1502 aa1.78□□□□□ -2.12
SMC5-203ENST00000475540 PPIP5K1Q6PFW1 1433 aa1.78□□□□□ -2.12
SMC5-203ENST00000475540 PKIAP61925 76 aa1.78□□□□□ -2.12
SMC5-203ENST00000475540 MYOZ3Q8TDC0 251 aa1.78□□□□□ -2.12
SMC5-203ENST00000475540 TMEM14BQ9NUH8 114 aa1.78□□□□□ -2.12
SMC5-203ENST00000475540 MED13Q9UHV7 2174 aa1.78□□□□□ -2.13
SMC5-203ENST00000475540 PATJQ8NI35 1801 aa1.77□□□□□ -2.13
SMC5-203ENST00000475540 PXDNQ92626 1479 aa1.77□□□□□ -2.13
SMC5-203ENST00000475540 A0A1W2PPM0 123 aa1.77□□□□□ -2.13
SMC5-203ENST00000475540 ELOF1P60002 83 aaKnown RBP1.77□□□□□ -2.13
SMC5-203ENST00000475540 NCMAPQ5T1S8 102 aa1.77□□□□□ -2.13
SMC5-203ENST00000475540 PLXNA1Q9UIW2 1896 aa1.77□□□□□ -2.13
SMC5-203ENST00000475540 PHIPQ8WWQ0 1821 aa1.77□□□□□ -2.13
SMC5-203ENST00000475540 NHSL1Q5SYE7 1610 aa1.77□□□□□ -2.13
SMC5-203ENST00000475540 PARP14Q460N5 1801 aa1.76□□□□□ -2.13
SMC5-203ENST00000475540 C10orf128Q5T292 105 aa1.76□□□□□ -2.13
SMC5-203ENST00000475540 SHROOM2Q13796 1616 aa1.76□□□□□ -2.13
SMC5-203ENST00000475540 ABCC10Q5T3U5 1492 aa1.75□□□□□ -2.13
SMC5-203ENST00000475540 ZNF609O15014 1411 aa1.75□□□□□ -2.13
SMC5-203ENST00000475540 SCAPERQ9BY12 1400 aa1.75□□□□□ -2.13
SMC5-203ENST00000475540 ASCC3Q8N3C0 2202 aaKnown RBP1.75□□□□□ -2.13
SMC5-203ENST00000475540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.75□□□□□ -2.13
SMC5-203ENST00000475540 CLPSL1A2RUU4 121 aa1.75□□□□□ -2.13
SMC5-203ENST00000475540 EDDM3BP56851 147 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms