RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 GAGE12HA6NDE8 117 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 A6NDN8 102 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 NPIPB6E9PJ23 425 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 INSP01308 110 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 ARL14EPLP0DKL9 152 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 PDE6HQ13956 83 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 FXYD5Q96DB9 178 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 MRPL53Q96EL3 112 aaKnown RBP5.08□□□□□ -1.6
LSAMP-203ENST00000474851 ZNF479Q96JC4 524 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 FAM19A4Q96LR4 140 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 LINC01587Q99440 93 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 AGPAT4-IT1Q9H0P7 198 aa5.08□□□□□ -1.6
LSAMP-203ENST00000474851 TRAV26-1A0A087WT03 109 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 TEX48A0A1B0GUV7 120 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 A0A1W2PPM0 123 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 A0A1W2PPV4 95 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 LYRM9A8MSI8 78 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 GNG4P50150 75 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 CKS1BP61024 79 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 ERCC8Q13216 396 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 KIAA1644Q3SXP7 199 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 CENPWQ5EE01 88 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 ERASQ7Z444 233 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 BOD1L2Q8IYS8 172 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 EXOC3-AS1Q8N2X6 119 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 GATD1Q8NB37 220 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 OR10J6PQ8NGY7 276 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 OR10AG1Q8NH19 301 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 BLNKQ8WV28 456 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 ODF3Q96PU9 254 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 DNAH17Q9UFH2 4485 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 DNAH6Q9C0G6 4158 aa5.07□□□□□ -1.6
LSAMP-203ENST00000474851 A0A1W2PRE2 83 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 hDV102S1A0JD36 115 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 KLLNB2CW77 178 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 HTN1P15515 57 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 NTF3P20783 257 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 DAD1P61803 113 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 ZNF493Q6ZR52 646 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 C9orf47Q6ZRZ4 202 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 FA2HQ7L5A8 372 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 LINC00612Q8N6U2 182 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 LINC00477Q96M19 166 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 VGLL1Q99990 258 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 PAXXQ9BUH6 204 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 MRPL32Q9BYC8 188 aaKnown RBP5.06□□□□□ -1.6
LSAMP-203ENST00000474851 SPANXB1Q9NS25 103 aaPredicted RBP5.06□□□□□ -1.6
LSAMP-203ENST00000474851 TP73-AS1Q9UF72 201 aa5.06□□□□□ -1.6
LSAMP-203ENST00000474851 TRAV12-3A0A0B4J271 114 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 IGHV1-24A0A0C4DH33 117 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 F8W1H4 67 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 DEFB130BP0DP73 79 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 DEFB130AP0DP74 79 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 LEPP41159 167 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 CT83Q5H943 113 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 IBA57Q5T440 356 aaKnown RBP5.05□□□□□ -1.6
LSAMP-203ENST00000474851 Q6ZQT7 251 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 ZFAND2AQ8N6M9 145 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 POM121L12Q8N7R1 296 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 TMEM263Q8WUH6 116 aaKnown RBP5.05□□□□□ -1.6
LSAMP-203ENST00000474851 NDFIP1Q9BT67 221 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 NOP10Q9NPE3 64 aaKnown RBP5.05□□□□□ -1.6
LSAMP-203ENST00000474851 TMEM167BQ9NRX6 74 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 HIGD1BQ9P298 99 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 TIMM8BQ9Y5J9 83 aaPredicted RBP5.05□□□□□ -1.6
LSAMP-203ENST00000474851 DNAH11Q96DT5 4516 aa5.05□□□□□ -1.6
LSAMP-203ENST00000474851 DYNC1H1Q14204 4646 aaKnown RBP5.04□□□□□ -1.6
LSAMP-203ENST00000474851 IGKV2-40A0A087WW87 121 aaPredicted RBP5.04□□□□□ -1.6
LSAMP-203ENST00000474851 H3BUT2 72 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 J3QR89 54 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 LEPROTL1O95214 131 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 IGKV2D-40P01614 121 aaPredicted RBP5.04□□□□□ -1.6
LSAMP-203ENST00000474851 SLC25A5P05141 298 aaKnown RBP5.04□□□□□ -1.6
LSAMP-203ENST00000474851 P0DMU3 169 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 FAM231AP0DMU4 169 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 FAM231CP0DMU5 169 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 HTN3P15516 51 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 SMAGPQ0VAQ4 97 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 PRR9Q5T870 116 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 PQLC2Q6ZP29 291 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 LINC00173Q6ZV60 143 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 LYPD1Q8N2G4 141 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 NUP35Q8NFH5 326 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 GTSF1Q8WW33 167 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 C16orf74Q96GX8 76 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 LINC00467Q9BRT7 94 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 RNASE7Q9H1E1 156 aaKnown RBP5.04□□□□□ -1.6
LSAMP-203ENST00000474851 GTSF1LQ9H1H1 148 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 MRPL16Q9NX20 251 aaKnown RBP5.04□□□□□ -1.6
LSAMP-203ENST00000474851 ZNF492Q9P255 531 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 SPCS1Q9Y6A9 102 aa5.04□□□□□ -1.6
LSAMP-203ENST00000474851 E9PLD3 99 aa5.03□□□□□ -1.6
LSAMP-203ENST00000474851 RNASE4P34096 147 aaKnown RBP5.03□□□□□ -1.6
LSAMP-203ENST00000474851 ZNF138P52744 262 aa5.03□□□□□ -1.6
LSAMP-203ENST00000474851 DAZ2Q13117 558 aaKnown RBP5.03□□□□□ -1.6
LSAMP-203ENST00000474851 ANXA2RQ3ZCQ2 193 aa5.03□□□□□ -1.6
LSAMP-203ENST00000474851 RNASEKQ6P5S7 137 aaKnown RBP5.03□□□□□ -1.6
LSAMP-203ENST00000474851 C11orf72Q8NBR9 251 aa5.03□□□□□ -1.6
LSAMP-203ENST00000474851 ATP6V0E2Q8NHE4 81 aa5.03□□□□□ -1.6
LSAMP-203ENST00000474851 AP1S3Q96PC3 154 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms