RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PEX7O00628 323 aa7.94□□□□□ -1.14
TRAF4-209ENST00000473421 RPL19P84098 196 aaKnown RBP7.94□□□□□ -1.14
TRAF4-209ENST00000473421 SPACA4Q8TDM5 124 aa7.94□□□□□ -1.14
TRAF4-209ENST00000473421 GFRA4Q9GZZ7 299 aa7.94□□□□□ -1.14
TRAF4-209ENST00000473421 A0A1W2PRE2 83 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 GAS8-AS1O95177 125 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 CXorf1O96002 111 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 PET100P0DJ07 73 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 TPT1P13693 172 aaKnown RBP7.93□□□□□ -1.14
TRAF4-209ENST00000473421 RAB5CP51148 216 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 CNBPP62633 177 aaKnown RBP7.93□□□□□ -1.14
TRAF4-209ENST00000473421 ZNF674Q2M3X9 581 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 COX8CQ7Z4L0 72 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 OR10AG1Q8NH19 301 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 DPH3Q96FX2 82 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 TMEM167BQ9NRX6 74 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 KIF25-AS1Q9Y6Z4 181 aa7.93□□□□□ -1.14
TRAF4-209ENST00000473421 hDV102S1A0JD36 115 aa7.92□□□□□ -1.14
TRAF4-209ENST00000473421 HMSDA8MTL9 139 aa7.92□□□□□ -1.14
TRAF4-209ENST00000473421 KRTAP10-8P60410 259 aa7.92□□□□□ -1.14
TRAF4-209ENST00000473421 LINC01559Q495D7 138 aa7.92□□□□□ -1.14
TRAF4-209ENST00000473421 ZFP82Q8N141 532 aa7.92□□□□□ -1.14
TRAF4-209ENST00000473421 FAM74A7A6NL05 159 aa7.91□□□□□ -1.14
TRAF4-209ENST00000473421 RAB4BP61018 213 aa7.91□□□□□ -1.14
TRAF4-209ENST00000473421 SSTP61278 116 aa7.91□□□□□ -1.14
TRAF4-209ENST00000473421 ZNF56Q15929 161 aa7.91□□□□□ -1.14
TRAF4-209ENST00000473421 FAM162BQ5T6X4 162 aa7.91□□□□□ -1.14
TRAF4-209ENST00000473421 SLC51BQ86UW2 128 aa7.91□□□□□ -1.14
TRAF4-209ENST00000473421 COMMD7Q86VX2 200 aa7.91□□□□□ -1.14
TRAF4-209ENST00000473421 C20orf203Q8NBC4 194 aa7.91□□□□□ -1.14
TRAF4-209ENST00000473421 INO80EQ8NBZ0 244 aaPredicted RBP7.91□□□□□ -1.14
TRAF4-209ENST00000473421 PSMG3Q9BT73 122 aaPredicted RBP7.91□□□□□ -1.14
TRAF4-209ENST00000473421 ACTR3CQ9C0K3 210 aaPredicted RBP7.91□□□□□ -1.14
TRAF4-209ENST00000473421 PLAC8Q9NZF1 115 aa7.91□□□□□ -1.14
TRAF4-209ENST00000473421 IGLV4-60A0A075B6I1 120 aa7.9□□□□□ -1.14
TRAF4-209ENST00000473421 SMLR1H3BR10 107 aa7.9□□□□□ -1.14
TRAF4-209ENST00000473421 REG3AQ06141 175 aa7.9□□□□□ -1.14
TRAF4-209ENST00000473421 IGHV3-64A0A075B6Q5 118 aa7.89□□□□□ -1.15
TRAF4-209ENST00000473421 TRBV6-1A0A0K0K1D8 114 aa7.89□□□□□ -1.15
TRAF4-209ENST00000473421 PRR3P79522 188 aaKnown RBP7.89□□□□□ -1.15
TRAF4-209ENST00000473421 CLRN3Q8NCR9 226 aa7.89□□□□□ -1.15
TRAF4-209ENST00000473421 PRSS3P2Q8NHM4 247 aa7.89□□□□□ -1.15
TRAF4-209ENST00000473421 DERL1Q9BUN8 251 aa7.89□□□□□ -1.15
TRAF4-209ENST00000473421 VAX2Q9UIW0 290 aa7.89□□□□□ -1.15
TRAF4-209ENST00000473421 TNFSF18Q9UNG2 199 aa7.89□□□□□ -1.15
TRAF4-209ENST00000473421 A0A0J9YXV3 536 aa7.88□□□□□ -1.15
TRAF4-209ENST00000473421 LOC105371267A0A1B0GV96 52 aa7.88□□□□□ -1.15
TRAF4-209ENST00000473421 G3V3Q6 166 aa7.88□□□□□ -1.15
TRAF4-209ENST00000473421 LTAP01374 205 aa7.88□□□□□ -1.15
TRAF4-209ENST00000473421 SERF2P84101 59 aa7.88□□□□□ -1.15
TRAF4-209ENST00000473421 COX6A2Q02221 97 aa7.88□□□□□ -1.15
TRAF4-209ENST00000473421 LYPD6BQ8NI32 183 aa7.88□□□□□ -1.15
TRAF4-209ENST00000473421 ZNF471Q9BX82 626 aaPredicted RBP7.88□□□□□ -1.15
TRAF4-209ENST00000473421 ZFP30Q9Y2G7 519 aa7.88□□□□□ -1.15
TRAF4-209ENST00000473421 TMA7Q9Y2S6 64 aaKnown RBP7.88□□□□□ -1.15
TRAF4-209ENST00000473421 F5H697 171 aa7.87□□□□□ -1.15
TRAF4-209ENST00000473421 RPL7L1Q6DKI1 246 aaKnown RBP7.87□□□□□ -1.15
TRAF4-209ENST00000473421 C15orf56Q8N910 161 aa7.87□□□□□ -1.15
TRAF4-209ENST00000473421 GTSF1Q8WW33 167 aa7.87□□□□□ -1.15
TRAF4-209ENST00000473421 HIST1H2BAQ96A08 127 aa7.87□□□□□ -1.15
TRAF4-209ENST00000473421 RNF185Q96GF1 192 aa7.87□□□□□ -1.15
TRAF4-209ENST00000473421 DPH3P1Q9H4G8 78 aa7.87□□□□□ -1.15
TRAF4-209ENST00000473421 MBP02144 154 aa7.86□□□□□ -1.15
TRAF4-209ENST00000473421 IQCJQ1A5X6 159 aa7.86□□□□□ -1.15
TRAF4-209ENST00000473421 WDR73Q6P4I2 378 aa7.86□□□□□ -1.15
TRAF4-209ENST00000473421 AQP10Q96PS8 301 aa7.86□□□□□ -1.15
TRAF4-209ENST00000473421 TRBV25-1A0A075B6N4 114 aa7.85□□□□□ -1.15
TRAF4-209ENST00000473421 IGKV2-24A0A0C4DH68 120 aa7.85□□□□□ -1.15
TRAF4-209ENST00000473421 CTXND1A0A1B0GTU2 59 aa7.85□□□□□ -1.15
TRAF4-209ENST00000473421 ZNF345Q14585 488 aa7.85□□□□□ -1.15
TRAF4-209ENST00000473421 MAJINQ3KP22 176 aa7.85□□□□□ -1.15
TRAF4-209ENST00000473421 HIGD2BQ4VC39 106 aa7.85□□□□□ -1.15
TRAF4-209ENST00000473421 FMC1Q96HJ9 113 aa7.85□□□□□ -1.15
TRAF4-209ENST00000473421 SSBP4Q9BWG4 385 aaPredicted RBP7.85□□□□□ -1.15
TRAF4-209ENST00000473421 SNAI2O43623 268 aa7.84□□□□□ -1.15
TRAF4-209ENST00000473421 C7orf33Q8WU49 177 aa7.84□□□□□ -1.15
TRAF4-209ENST00000473421 A0A096LNI7 61 aa7.83□□□□□ -1.16
TRAF4-209ENST00000473421 IGHV1-24A0A0C4DH33 117 aa7.83□□□□□ -1.16
TRAF4-209ENST00000473421 M0QY20 66 aa7.83□□□□□ -1.16
TRAF4-209ENST00000473421 PKIAP61925 76 aa7.83□□□□□ -1.16
TRAF4-209ENST00000473421 UBE2G1P62253 170 aa7.83□□□□□ -1.16
TRAF4-209ENST00000473421 SRSF9Q13242 221 aaKnown RBP eCLIP7.83□□□□□ -1.164e-6■■□□□ 11.4
TRAF4-209ENST00000473421 UQCC3Q6UW78 93 aa7.83□□□□□ -1.16
TRAF4-209ENST00000473421 TMUB2Q71RG4 321 aa7.83□□□□□ -1.16
TRAF4-209ENST00000473421 STPG4Q8N801 248 aa7.83□□□□□ -1.16
TRAF4-209ENST00000473421 AP5S1Q9NUS5 200 aa7.83□□□□□ -1.16
TRAF4-209ENST00000473421 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.82□□□□□ -1.16
TRAF4-209ENST00000473421 GAGE12HA6NDE8 117 aa7.82□□□□□ -1.16
TRAF4-209ENST00000473421 TEX46H3BTG2 121 aa7.82□□□□□ -1.16
TRAF4-209ENST00000473421 FHITP49789 147 aa7.82□□□□□ -1.16
TRAF4-209ENST00000473421 SPANXN1Q5VSR9 72 aa7.82□□□□□ -1.16
TRAF4-209ENST00000473421 CST9LP1Q5W188 147 aa7.82□□□□□ -1.16
TRAF4-209ENST00000473421 MLST8Q9BVC4 326 aa7.82□□□□□ -1.16
TRAF4-209ENST00000473421 MUC2Q02817 5179 aa7.81□□□□□ -1.16
TRAF4-209ENST00000473421 TRAV8-4A0A0B4J246 113 aa7.81□□□□□ -1.16
TRAF4-209ENST00000473421 P01737 135 aa7.81□□□□□ -1.16
TRAF4-209ENST00000473421 OR5AL1P0C617 328 aa7.81□□□□□ -1.16
TRAF4-209ENST00000473421 GZMBP10144 247 aa7.81□□□□□ -1.16
TRAF4-209ENST00000473421 RPS10P46783 165 aaKnown RBP7.81□□□□□ -1.16
TRAF4-209ENST00000473421 TMEM97Q5BJF2 176 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms