RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SMIM15Q7Z3B0 74 aa10.41□□□□□ -0.74
SDC3-203ENST00000471567 DNAH10Q8IVF4 4471 aa10.41□□□□□ -0.74
SDC3-203ENST00000471567 M0QY20 66 aa10.4□□□□□ -0.74
SDC3-203ENST00000471567 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.4□□□□□ -0.74
SDC3-203ENST00000471567 DNAJC30Q96LL9 226 aa10.4□□□□□ -0.74
SDC3-203ENST00000471567 A0A1B0GUT8 65 aa10.39□□□□□ -0.75
SDC3-203ENST00000471567 LINC01556Q5JQF7 62 aa10.39□□□□□ -0.75
SDC3-203ENST00000471567 SUMO4Q6EEV6 95 aa10.39□□□□□ -0.75
SDC3-203ENST00000471567 UQCC3Q6UW78 93 aa10.39□□□□□ -0.75
SDC3-203ENST00000471567 C10orf126Q8N4M7 172 aa10.39□□□□□ -0.75
SDC3-203ENST00000471567 PRSS29PA6NIE9 313 aa10.38□□□□□ -0.75
SDC3-203ENST00000471567 RASL11AQ6T310 242 aa10.38□□□□□ -0.75
SDC3-203ENST00000471567 NAT8BQ9UHF3 227 aa10.38□□□□□ -0.75
SDC3-203ENST00000471567 TNFRSF18Q9Y5U5 241 aa10.38□□□□□ -0.75
SDC3-203ENST00000471567 SMIM27A0A1W2PRY6 76 aa10.37□□□□□ -0.75
SDC3-203ENST00000471567 PNRC1Q12796 327 aaPredicted RBP10.37□□□□□ -0.75
SDC3-203ENST00000471567 DAZ4Q86SG3 579 aaKnown RBP10.37□□□□□ -0.75
SDC3-203ENST00000471567 COMMD7Q86VX2 200 aa10.37□□□□□ -0.75
SDC3-203ENST00000471567 NUP35Q8NFH5 326 aa10.37□□□□□ -0.75
SDC3-203ENST00000471567 FRZBQ92765 325 aa10.37□□□□□ -0.75
SDC3-203ENST00000471567 DAZ3Q9NR90 486 aaKnown RBP10.37□□□□□ -0.75
SDC3-203ENST00000471567 RIGQ13278 110 aa10.36□□□□□ -0.75
SDC3-203ENST00000471567 TMEM97Q5BJF2 176 aa10.36□□□□□ -0.75
SDC3-203ENST00000471567 NIT2Q9NQR4 276 aa10.36□□□□□ -0.75
SDC3-203ENST00000471567 PPP1R2P9O14990 202 aa10.35□□□□□ -0.75
SDC3-203ENST00000471567 NFE4Q86UQ8 179 aa10.35□□□□□ -0.75
SDC3-203ENST00000471567 TMEM191AQ9H0A3 160 aa10.35□□□□□ -0.75
SDC3-203ENST00000471567 DNAH2Q9P225 4427 aa10.34□□□□□ -0.75
SDC3-203ENST00000471567 TRBV6-8A0A0A6YYG3 113 aa10.34□□□□□ -0.75
SDC3-203ENST00000471567 GATD1Q8NB37 220 aa10.34□□□□□ -0.75
SDC3-203ENST00000471567 FRAS1Q86XX4 4008 aa10.33□□□□□ -0.76
SDC3-203ENST00000471567 DNAH17Q9UFH2 4485 aa10.33□□□□□ -0.76
SDC3-203ENST00000471567 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
SDC3-203ENST00000471567 IGHV3-30P01768 117 aa10.33□□□□□ -0.76
SDC3-203ENST00000471567 IGHV3-33P01772 117 aa10.33□□□□□ -0.76
SDC3-203ENST00000471567 IGHV3-30-3P0DP02 117 aa10.33□□□□□ -0.76
SDC3-203ENST00000471567 IGHV3-30-5P0DP03 117 aa10.33□□□□□ -0.76
SDC3-203ENST00000471567 NIT1Q86X76 327 aa10.33□□□□□ -0.76
SDC3-203ENST00000471567 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
SDC3-203ENST00000471567 A0A1B0GVY2 172 aa10.32□□□□□ -0.76
SDC3-203ENST00000471567 A0A1B0GW15 77 aa10.32□□□□□ -0.76
SDC3-203ENST00000471567 TMEM218A2RU14 115 aa10.32□□□□□ -0.76
SDC3-203ENST00000471567 MT-ND4LP03901 98 aa10.32□□□□□ -0.76
SDC3-203ENST00000471567 TNP2Q05952 138 aa10.32□□□□□ -0.76
SDC3-203ENST00000471567 Q6ZRN7 208 aaPredicted RBP10.32□□□□□ -0.76
SDC3-203ENST00000471567 ANAPC16Q96DE5 110 aa10.32□□□□□ -0.76
SDC3-203ENST00000471567 URGCP-MRPS24S4R325 110 aa10.32□□□□□ -0.76
SDC3-203ENST00000471567 TRAV26-2A0A0B4J265 109 aa10.31□□□□□ -0.76
SDC3-203ENST00000471567 PKIAP61925 76 aa10.31□□□□□ -0.76
SDC3-203ENST00000471567 LAGE3Q14657 143 aa10.31□□□□□ -0.76
SDC3-203ENST00000471567 KCNIP4Q6PIL6 250 aa10.31□□□□□ -0.76
SDC3-203ENST00000471567 NTM-AS1Q6ZSK4 140 aa10.31□□□□□ -0.76
SDC3-203ENST00000471567 EPPK1P58107 5090 aaKnown RBP10.31□□□□□ -0.76
SDC3-203ENST00000471567 RAB4AP20338 218 aa10.3□□□□□ -0.76
SDC3-203ENST00000471567 MRAP2Q96G30 205 aa10.3□□□□□ -0.76
SDC3-203ENST00000471567 RNF185Q96GF1 192 aa10.3□□□□□ -0.76
SDC3-203ENST00000471567 TRBV25-1A0A075B6N4 114 aa10.29□□□□□ -0.76
SDC3-203ENST00000471567 A0A087WX48 190 aa10.29□□□□□ -0.76
SDC3-203ENST00000471567 F8W036 122 aa10.29□□□□□ -0.76
SDC3-203ENST00000471567 S100A8P05109 93 aa10.29□□□□□ -0.76
SDC3-203ENST00000471567 ELOBQ15370 118 aa10.29□□□□□ -0.76
SDC3-203ENST00000471567 IQCJQ1A5X6 159 aa10.29□□□□□ -0.76
SDC3-203ENST00000471567 SLC7A5P1Q8MH63 180 aa10.29□□□□□ -0.76
SDC3-203ENST00000471567 SEC11CQ9BY50 192 aa10.29□□□□□ -0.76
SDC3-203ENST00000471567 IGHV1-24A0A0C4DH33 117 aa10.28□□□□□ -0.76
SDC3-203ENST00000471567 TRBV6-5A0A0K0K1A5 114 aa10.28□□□□□ -0.76
SDC3-203ENST00000471567 ADCYAP1P18509 176 aa10.28□□□□□ -0.76
SDC3-203ENST00000471567 AMN1Q8IY45 258 aa10.28□□□□□ -0.76
SDC3-203ENST00000471567 Q8N3U1 123 aa10.28□□□□□ -0.76
SDC3-203ENST00000471567 RPL39LQ96EH5 51 aaKnown RBP10.28□□□□□ -0.76
SDC3-203ENST00000471567 CHCHD5Q9BSY4 110 aa10.28□□□□□ -0.76
SDC3-203ENST00000471567 FAT2Q9NYQ8 4349 aa10.28□□□□□ -0.76
SDC3-203ENST00000471567 TRAV8-3A0A0A6YYJ7 113 aa10.27□□□□□ -0.77
SDC3-203ENST00000471567 TMEM262E9PQX1 116 aa10.27□□□□□ -0.77
SDC3-203ENST00000471567 CAMPP49913 170 aa10.27□□□□□ -0.77
SDC3-203ENST00000471567 HBBP68871 147 aa10.27□□□□□ -0.77
SDC3-203ENST00000471567 COTL1Q14019 142 aa10.27□□□□□ -0.77
SDC3-203ENST00000471567 FAM104BQ5XKR9 115 aa10.27□□□□□ -0.77
SDC3-203ENST00000471567 ATP5L2Q7Z4Y8 100 aa10.27□□□□□ -0.77
SDC3-203ENST00000471567 A0A1B0GXF2 115 aa10.26□□□□□ -0.77
SDC3-203ENST00000471567 PPP1R17O96001 155 aa10.26□□□□□ -0.77
SDC3-203ENST00000471567 SDHAF1A6NFY7 115 aa10.25□□□□□ -0.77
SDC3-203ENST00000471567 NCR2O95944 276 aa10.25□□□□□ -0.77
SDC3-203ENST00000471567 S100A1P23297 94 aa10.25□□□□□ -0.77
SDC3-203ENST00000471567 MRPL54Q6P161 138 aaKnown RBP10.25□□□□□ -0.77
SDC3-203ENST00000471567 TMEM243Q9BU79 118 aa10.25□□□□□ -0.77
SDC3-203ENST00000471567 TM2D2Q9BX73 214 aa10.25□□□□□ -0.77
SDC3-203ENST00000471567 Q9HAA7 133 aa10.25□□□□□ -0.77
SDC3-203ENST00000471567 ST20Q9HBF5 79 aa10.25□□□□□ -0.77
SDC3-203ENST00000471567 KLK12Q9UKR0 248 aa10.25□□□□□ -0.77
SDC3-203ENST00000471567 GAS8-AS1O95177 125 aa10.24□□□□□ -0.77
SDC3-203ENST00000471567 MPV17L2Q567V2 206 aa10.24□□□□□ -0.77
SDC3-203ENST00000471567 C10orf91Q5T1B1 145 aa10.24□□□□□ -0.77
SDC3-203ENST00000471567 ATRAIDQ6UW56 229 aa10.24□□□□□ -0.77
SDC3-203ENST00000471567 IMMP2LQ96T52 175 aa10.24□□□□□ -0.77
SDC3-203ENST00000471567 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
SDC3-203ENST00000471567 HECTD4Q9Y4D8 3996 aa10.23□□□□□ -0.77
SDC3-203ENST00000471567 I3L3M4 83 aa10.23□□□□□ -0.77
SDC3-203ENST00000471567 EREGO14944 169 aa10.23□□□□□ -0.77
SDC3-203ENST00000471567 PSCAO43653 123 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms