RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 RPL39LQ96EH5 51 aaKnown RBP12.62□□□□□ -0.39
HSPG2-208ENST00000471322 TRBV6-5A0A0K0K1A5 114 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 H7C1H1 209 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 RHODO00212 210 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 PRM2P04554 102 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 LINC00173Q6ZV60 143 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 CSTL1Q9H114 145 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 EDA2RQ9HAV5 297 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 M0QY20 66 aa12.61□□□□□ -0.39
HSPG2-208ENST00000471322 G0S2P27469 103 aa12.61□□□□□ -0.39
HSPG2-208ENST00000471322 RNASE8Q8TDE3 154 aaKnown RBP12.61□□□□□ -0.39
HSPG2-208ENST00000471322 VAMP8Q9BV40 100 aa12.61□□□□□ -0.39
HSPG2-208ENST00000471322 TENM3Q9P273 2699 aa12.61□□□□□ -0.39
HSPG2-208ENST00000471322 VCYO14598 125 aa12.6□□□□□ -0.39
HSPG2-208ENST00000471322 AZU1P20160 251 aa12.6□□□□□ -0.39
HSPG2-208ENST00000471322 ZNF664Q8N3J9 261 aa12.6□□□□□ -0.39
HSPG2-208ENST00000471322 CSNK1G2-AS1Q8NCQ2 148 aa12.6□□□□□ -0.39
HSPG2-208ENST00000471322 IL17DQ8TAD2 202 aa12.6□□□□□ -0.39
HSPG2-208ENST00000471322 ZNF705AQ6ZN79 300 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-208ENST00000471322 C16orf74Q96GX8 76 aa12.59□□□□□ -0.39
HSPG2-208ENST00000471322 TCAPO15273 167 aa12.59□□□□□ -0.39
HSPG2-208ENST00000471322 NUDT3O95989 172 aa12.59□□□□□ -0.39
HSPG2-208ENST00000471322 POLR2KP53803 58 aaKnown RBP12.59□□□□□ -0.39
HSPG2-208ENST00000471322 LGALS9BQ3B8N2 356 aa12.59□□□□□ -0.39
HSPG2-208ENST00000471322 IFI27L1Q96BM0 104 aa12.59□□□□□ -0.39
HSPG2-208ENST00000471322 RS1O15537 224 aa12.58□□□□□ -0.4
HSPG2-208ENST00000471322 ATP5LO75964 103 aa12.58□□□□□ -0.4
HSPG2-208ENST00000471322 DAZ2Q13117 558 aaKnown RBP12.58□□□□□ -0.4
HSPG2-208ENST00000471322 CFAP126Q5VTH2 177 aa12.58□□□□□ -0.4
HSPG2-208ENST00000471322 UFSP1Q6NVU6 142 aa12.58□□□□□ -0.4
HSPG2-208ENST00000471322 ZFP2Q6ZN57 461 aa12.58□□□□□ -0.4
HSPG2-208ENST00000471322 STAB2Q8WWQ8 2551 aa12.58□□□□□ -0.4
HSPG2-208ENST00000471322 LINC01549A6NIU2 74 aa12.57□□□□□ -0.4
HSPG2-208ENST00000471322 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
HSPG2-208ENST00000471322 KIR2DL4Q99706 377 aa12.57□□□□□ -0.4
HSPG2-208ENST00000471322 MRPL16Q9NX20 251 aaKnown RBP12.57□□□□□ -0.4
HSPG2-208ENST00000471322 TRBV27A0A0K0K1C4 114 aa12.56□□□□□ -0.4
HSPG2-208ENST00000471322 LINC01545Q5VT33 79 aa12.56□□□□□ -0.4
HSPG2-208ENST00000471322 PRO1933Q9H354 126 aa12.56□□□□□ -0.4
HSPG2-208ENST00000471322 KIR2DL5BA0A0G2JN68 375 aa12.55□□□□□ -0.4
HSPG2-208ENST00000471322 KIR2DL5BA0A0G2JPC4 375 aa12.55□□□□□ -0.4
HSPG2-208ENST00000471322 SDHAF1A6NFY7 115 aa12.55□□□□□ -0.4
HSPG2-208ENST00000471322 A8MZ25 164 aa12.55□□□□□ -0.4
HSPG2-208ENST00000471322 KIR2DL5AQ8N109 375 aa12.55□□□□□ -0.4
HSPG2-208ENST00000471322 KIR2DL5BQ8NHK3 375 aa12.55□□□□□ -0.4
HSPG2-208ENST00000471322 TRAV9-2A0A087WT02 112 aa12.55□□□□□ -0.4
HSPG2-208ENST00000471322 TRGV1A0A0A0MS02 117 aa12.55□□□□□ -0.4
HSPG2-208ENST00000471322 LGALS9CQ6DKI2 356 aa12.55□□□□□ -0.4
HSPG2-208ENST00000471322 PAM16Q9Y3D7 125 aa12.54□□□□□ -0.4
HSPG2-208ENST00000471322 H0Y8G0 127 aa12.53□□□□□ -0.4
HSPG2-208ENST00000471322 CIDEAO60543 219 aa12.53□□□□□ -0.4
HSPG2-208ENST00000471322 IGHV3-53P01767 116 aa12.53□□□□□ -0.4
HSPG2-208ENST00000471322 APOC4P55056 127 aa12.53□□□□□ -0.4
HSPG2-208ENST00000471322 OR4C5Q8NGB2 326 aa12.53□□□□□ -0.4
HSPG2-208ENST00000471322 TOMM6Q96B49 74 aa12.53□□□□□ -0.4
HSPG2-208ENST00000471322 OVOL2Q9BRP0 275 aa12.53□□□□□ -0.4
HSPG2-208ENST00000471322 RETNQ9HD89 108 aa12.53□□□□□ -0.4
HSPG2-208ENST00000471322 IGHV3-73A0A0B4J1V6 119 aa12.52□□□□□ -0.4
HSPG2-208ENST00000471322 SMIM9A6NGZ8 99 aa12.52□□□□□ -0.4
HSPG2-208ENST00000471322 DNAJC30Q96LL9 226 aa12.52□□□□□ -0.4
HSPG2-208ENST00000471322 HSBP1L1C9JCN9 74 aa12.51□□□□□ -0.41
HSPG2-208ENST00000471322 I3L3M4 83 aa12.51□□□□□ -0.41
HSPG2-208ENST00000471322 NHLRC4P0CG21 123 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-208ENST00000471322 DDTP30046 118 aa12.51□□□□□ -0.41
HSPG2-208ENST00000471322 SPATA45Q537H7 98 aa12.51□□□□□ -0.41
HSPG2-208ENST00000471322 C18orf15Q96N68 181 aa12.51□□□□□ -0.41
HSPG2-208ENST00000471322 NOP10Q9NPE3 64 aaKnown RBP12.51□□□□□ -0.41
HSPG2-208ENST00000471322 TNFRSF18Q9Y5U5 241 aa12.51□□□□□ -0.41
HSPG2-208ENST00000471322 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
HSPG2-208ENST00000471322 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-208ENST00000471322 PRSS1P07477 247 aa12.51□□□□□ -0.41
HSPG2-208ENST00000471322 RHOHQ15669 191 aa12.51□□□□□ -0.41
HSPG2-208ENST00000471322 ATOH7Q8N100 152 aa12.51□□□□□ -0.41
HSPG2-208ENST00000471322 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
HSPG2-208ENST00000471322 C2orf66Q6UXQ4 117 aa12.5□□□□□ -0.41
HSPG2-208ENST00000471322 Q6ZTI0 123 aa12.5□□□□□ -0.41
HSPG2-208ENST00000471322 SCGB3A1Q96QR1 104 aa12.5□□□□□ -0.41
HSPG2-208ENST00000471322 CYSLTR1Q9Y271 337 aa12.5□□□□□ -0.41
HSPG2-208ENST00000471322 NEGR1Q7Z3B1 354 aa12.49□□□□□ -0.41
HSPG2-208ENST00000471322 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
HSPG2-208ENST00000471322 ZMAT4Q9H898 229 aa12.49□□□□□ -0.41
HSPG2-208ENST00000471322 Q6ZN92 141 aa12.48□□□□□ -0.41
HSPG2-208ENST00000471322 ERASQ7Z444 233 aa12.48□□□□□ -0.41
HSPG2-208ENST00000471322 LINC00587B1AMM8 73 aa12.48□□□□□ -0.41
HSPG2-208ENST00000471322 TRBV10-1A0A0K0K1A3 114 aa12.47□□□□□ -0.41
HSPG2-208ENST00000471322 Q6ZSN1 163 aa12.47□□□□□ -0.41
HSPG2-208ENST00000471322 MIEN1Q9BRT3 115 aa12.47□□□□□ -0.41
HSPG2-208ENST00000471322 TRGV2A0A075B6R0 118 aa12.46□□□□□ -0.41
HSPG2-208ENST00000471322 TMEM141Q96I45 108 aa12.46□□□□□ -0.41
HSPG2-208ENST00000471322 SPATA25Q9BR10 227 aa12.46□□□□□ -0.41
HSPG2-208ENST00000471322 TRAV12-1A0A0B4J245 112 aa12.45□□□□□ -0.42
HSPG2-208ENST00000471322 TSHBP01222 138 aa12.45□□□□□ -0.42
HSPG2-208ENST00000471322 DEFB135Q30KP9 77 aa12.45□□□□□ -0.42
HSPG2-208ENST00000471322 NEXN-AS1Q8NBZ9 246 aa12.45□□□□□ -0.42
HSPG2-208ENST00000471322 ZNF479Q96JC4 524 aa12.45□□□□□ -0.42
HSPG2-208ENST00000471322 PMCHL2Q9BQD1 86 aa12.45□□□□□ -0.42
HSPG2-208ENST00000471322 P0DMU3 169 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 FAM231AP0DMU4 169 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 FAM231CP0DMU5 169 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 ODF1Q14990 250 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms