RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 LYRM9A8MSI8 78 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 H7C1H1 209 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 PHOX2AO14813 284 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 S100A6P06703 90 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 AZU1P20160 251 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 EVI2AP22794 236 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 CKS2P33552 79 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 SSTP61278 116 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 SLAQ13239 276 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 DEFB121Q5J5C9 76 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 OR10J3Q5JRS4 329 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 ZFP2Q6ZN57 461 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 MSRB1Q9NZV6 116 aa4.76□□□□□ -1.65
VAMP3-202ENST00000470357 TRGV1A0A0A0MS02 117 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 C3orf84H3BNL1 204 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST1H2BKO60814 126 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST1H2BJP06899 126 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 MGPP08493 103 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 RAB4AP20338 218 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST1H2BOP23527 126 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 SRIP30626 198 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST1H2BBP33778 126 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST1H2BDP58876 126 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST1H2BCP62807 126 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST2H2BEQ16778 126 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 MRPL51Q4U2R6 128 aaKnown RBP4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.75□□□□□ -1.65
VAMP3-202ENST00000470357 AMN1Q8IY45 258 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 C14orf178Q8N769 122 aaPredicted RBP4.75□□□□□ -1.65
VAMP3-202ENST00000470357 POM121L12Q8N7R1 296 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST1H2BHQ93079 126 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 PRELID3AQ96N28 172 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST1H2BNQ99877 126 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 HIST1H2BMQ99879 126 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 ALKBH7Q9BT30 221 aaPredicted RBP4.75□□□□□ -1.65
VAMP3-202ENST00000470357 U3KQK5 164 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 RYR1P21817 5038 aa4.75□□□□□ -1.65
VAMP3-202ENST00000470357 TRGV2A0A075B6R0 118 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 A0A087WWL8 130 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 TRAV4A0A0B4J268 109 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 PLAC8L1A1L4L8 177 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 D6R8Y8 96 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 F5H697 171 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 RS1O15537 224 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 NUDT3O95989 172 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 BTF3P20290 206 aaKnown RBP4.74□□□□□ -1.65
VAMP3-202ENST00000470357 Q0VG73 95 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 KIAA1644Q3SXP7 199 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 COA6Q5JTJ3 125 aaKnown RBP4.74□□□□□ -1.65
VAMP3-202ENST00000470357 FAM74A4Q5TZK3 123 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 BAGE3Q86Y29 109 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 OR4C5Q8NGB2 326 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 C18orf15Q96N68 181 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 EDA2RQ9HAV5 297 aa4.74□□□□□ -1.65
VAMP3-202ENST00000470357 NOP10Q9NPE3 64 aaKnown RBP4.74□□□□□ -1.65
VAMP3-202ENST00000470357 MRPL16Q9NX20 251 aaKnown RBP4.74□□□□□ -1.65
VAMP3-202ENST00000470357 IGHV4-28A0A0C4DH34 117 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 K7EMI3 77 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 CRYGDP07320 174 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 SPART-AS1P0CW21 52 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 PMCHP20382 165 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 ZNF56Q15929 161 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 CASC10Q5T4H9 136 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 CFAP126Q5VTH2 177 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 Q6ZTI0 123 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 LINC00612Q8N6U2 182 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 Q8NAQ8 132 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 RNF185Q96GF1 192 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 C20orf78Q9BR46 151 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 C11orf68Q9H3H3 251 aaKnown RBP4.73□□□□□ -1.65
VAMP3-202ENST00000470357 MAP1LC3AQ9H492 121 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 NXT2Q9NPJ8 142 aaKnown RBP4.73□□□□□ -1.65
VAMP3-202ENST00000470357 KIF25-AS1Q9Y6Z4 181 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 FRAS1Q86XX4 4008 aa4.73□□□□□ -1.65
VAMP3-202ENST00000470357 TRBV10-1A0A0K0K1A3 114 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 TCAPO15273 167 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 IGHV3-53P01767 116 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 PRM2P04554 102 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 NHLRC4P0CG21 123 aaPredicted RBP4.72□□□□□ -1.65
VAMP3-202ENST00000470357 G0S2P27469 103 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 EMP1P54849 157 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 NDUFA6P56556 154 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 LINC00315P59091 139 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 RPL32P62910 135 aaKnown RBP4.72□□□□□ -1.65
VAMP3-202ENST00000470357 FAM222AQ5U5X8 452 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 SUMO4Q6EEV6 95 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 PRSS3P2Q8NHM4 247 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 C18orf32Q8TCD1 76 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 CHCHD1Q96BP2 118 aaKnown RBP4.72□□□□□ -1.65
VAMP3-202ENST00000470357 DNAJC30Q96LL9 226 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 TM2D3Q9BRN9 247 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 ST20Q9HBF5 79 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 PCLOQ9Y6V0 5065 aa4.72□□□□□ -1.65
VAMP3-202ENST00000470357 TRGV4A0A0C4DH28 118 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 TRBV6-5A0A0K0K1A5 114 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 LCE6AA0A183 80 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 LINC01549A6NIU2 74 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 M0QY20 66 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 GAGE7O76087 117 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 NCR2O95944 276 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms