RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 GTSF1LQ9H1H1 148 aa8.21□□□□□ -1.1
VPS13D-204ENST00000469054 TRBV7-3A0A075B6L6 115 aa8.2□□□□□ -1.1
VPS13D-204ENST00000469054 H7C1H1 209 aa8.2□□□□□ -1.1
VPS13D-204ENST00000469054 M0QY20 66 aa8.2□□□□□ -1.1
VPS13D-204ENST00000469054 MT-ND4LP03901 98 aa8.2□□□□□ -1.1
VPS13D-204ENST00000469054 RIGQ13278 110 aa8.2□□□□□ -1.1
VPS13D-204ENST00000469054 SUMO4Q6EEV6 95 aa8.2□□□□□ -1.1
VPS13D-204ENST00000469054 NEXN-AS1Q8NBZ9 246 aa8.2□□□□□ -1.1
VPS13D-204ENST00000469054 DNAH6Q9C0G6 4158 aa8.19□□□□□ -1.1
VPS13D-204ENST00000469054 M0R2N4 97 aa8.19□□□□□ -1.1
VPS13D-204ENST00000469054 UBE2D3P61077 147 aa8.19□□□□□ -1.1
VPS13D-204ENST00000469054 UBE2D2P62837 147 aa8.19□□□□□ -1.1
VPS13D-204ENST00000469054 TMEM191AQ9H0A3 160 aa8.19□□□□□ -1.1
VPS13D-204ENST00000469054 SIVA1O15304 175 aa8.18□□□□□ -1.1
VPS13D-204ENST00000469054 C10orf91Q5T1B1 145 aa8.18□□□□□ -1.1
VPS13D-204ENST00000469054 Q6ZR54 194 aa8.18□□□□□ -1.1
VPS13D-204ENST00000469054 DNAJC30Q96LL9 226 aa8.18□□□□□ -1.1
VPS13D-204ENST00000469054 NBDYA0A0U1RRE5 68 aa8.17□□□□□ -1.1
VPS13D-204ENST00000469054 LELP1Q5T871 98 aa8.17□□□□□ -1.1
VPS13D-204ENST00000469054 RASL11AQ6T310 242 aa8.17□□□□□ -1.1
VPS13D-204ENST00000469054 CARHSP1Q9Y2V2 147 aaKnown RBP8.17□□□□□ -1.1
VPS13D-204ENST00000469054 TNFRSF18Q9Y5U5 241 aa8.17□□□□□ -1.1
VPS13D-204ENST00000469054 TRAV8-6A0A0B4J262 113 aa8.16□□□□□ -1.1
VPS13D-204ENST00000469054 TRAV26-2A0A0B4J265 109 aa8.16□□□□□ -1.1
VPS13D-204ENST00000469054 A0A1B0GW15 77 aa8.16□□□□□ -1.1
VPS13D-204ENST00000469054 OR10J3Q5JRS4 329 aa8.16□□□□□ -1.1
VPS13D-204ENST00000469054 WFDC10BQ8IUB3 73 aa8.16□□□□□ -1.1
VPS13D-204ENST00000469054 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.16□□□□□ -1.1
VPS13D-204ENST00000469054 GATD1Q8NB37 220 aa8.16□□□□□ -1.1
VPS13D-204ENST00000469054 FRZBQ92765 325 aa8.16□□□□□ -1.1
VPS13D-204ENST00000469054 RNF185Q96GF1 192 aa8.16□□□□□ -1.1
VPS13D-204ENST00000469054 NIT2Q9NQR4 276 aa8.16□□□□□ -1.1
VPS13D-204ENST00000469054 A0A087WWC5 75 aa8.15□□□□□ -1.1
VPS13D-204ENST00000469054 IGHV3-38A0A0C4DH36 116 aa8.15□□□□□ -1.1
VPS13D-204ENST00000469054 RAB4AP20338 218 aa8.15□□□□□ -1.1
VPS13D-204ENST00000469054 CAMPP49913 170 aa8.15□□□□□ -1.1
VPS13D-204ENST00000469054 TTC32Q5I0X7 151 aa8.15□□□□□ -1.1
VPS13D-204ENST00000469054 MRPL54Q6P161 138 aaKnown RBP8.15□□□□□ -1.1
VPS13D-204ENST00000469054 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.1
VPS13D-204ENST00000469054 AMN1Q8IY45 258 aa8.15□□□□□ -1.1
VPS13D-204ENST00000469054 CTDSP1Q9GZU7 261 aa8.15□□□□□ -1.1
VPS13D-204ENST00000469054 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.1
VPS13D-204ENST00000469054 A0A1B0GXF2 115 aa8.14□□□□□ -1.11
VPS13D-204ENST00000469054 S100A8P05109 93 aa8.14□□□□□ -1.11
VPS13D-204ENST00000469054 DNAH10OSP0CZ25 163 aa8.14□□□□□ -1.11
VPS13D-204ENST00000469054 HBBP68871 147 aa8.14□□□□□ -1.11
VPS13D-204ENST00000469054 ATP5L2Q7Z4Y8 100 aa8.14□□□□□ -1.11
VPS13D-204ENST00000469054 IMMP2LQ96T52 175 aa8.14□□□□□ -1.11
VPS13D-204ENST00000469054 C7orf77A4D0Y5 90 aa8.13□□□□□ -1.11
VPS13D-204ENST00000469054 TMEM97Q5BJF2 176 aa8.13□□□□□ -1.11
VPS13D-204ENST00000469054 FAM104BQ5XKR9 115 aa8.13□□□□□ -1.11
VPS13D-204ENST00000469054 CLRN3Q8NCR9 226 aa8.13□□□□□ -1.11
VPS13D-204ENST00000469054 RPL39LQ96EH5 51 aaKnown RBP8.13□□□□□ -1.11
VPS13D-204ENST00000469054 MRAP2Q96G30 205 aa8.13□□□□□ -1.11
VPS13D-204ENST00000469054 KRTAP1-5Q9BYS1 174 aa8.13□□□□□ -1.11
VPS13D-204ENST00000469054 TMEM242Q9NWH2 141 aa8.13□□□□□ -1.11
VPS13D-204ENST00000469054 DNAH2Q9P225 4427 aa8.13□□□□□ -1.11
VPS13D-204ENST00000469054 TRAV9-2A0A087WT02 112 aa8.12□□□□□ -1.11
VPS13D-204ENST00000469054 TRBV6-8A0A0A6YYG3 113 aa8.12□□□□□ -1.11
VPS13D-204ENST00000469054 K7EP13 123 aa8.12□□□□□ -1.11
VPS13D-204ENST00000469054 GAS8-AS1O95177 125 aa8.12□□□□□ -1.11
VPS13D-204ENST00000469054 RHEBQ15382 184 aa8.12□□□□□ -1.11
VPS13D-204ENST00000469054 NDUFA5Q16718 116 aa8.12□□□□□ -1.11
VPS13D-204ENST00000469054 LINC01556Q5JQF7 62 aa8.12□□□□□ -1.11
VPS13D-204ENST00000469054 C1orf134Q5TEV5 83 aa8.12□□□□□ -1.11
VPS13D-204ENST00000469054 BTF3L4Q96K17 158 aa8.12□□□□□ -1.11
VPS13D-204ENST00000469054 APOC3P02656 99 aa8.11□□□□□ -1.11
VPS13D-204ENST00000469054 BTF3P20290 206 aaKnown RBP8.11□□□□□ -1.11
VPS13D-204ENST00000469054 MRPL51Q4U2R6 128 aaKnown RBP8.11□□□□□ -1.11
VPS13D-204ENST00000469054 KCNIP4Q6PIL6 250 aa8.11□□□□□ -1.11
VPS13D-204ENST00000469054 NTM-AS1Q6ZSK4 140 aa8.11□□□□□ -1.11
VPS13D-204ENST00000469054 RPS10P5Q9NQ39 176 aa8.11□□□□□ -1.11
VPS13D-204ENST00000469054 DNAH10Q8IVF4 4471 aa8.11□□□□□ -1.11
VPS13D-204ENST00000469054 TRBV6-5A0A0K0K1A5 114 aa8.1□□□□□ -1.11
VPS13D-204ENST00000469054 SDHAF1A6NFY7 115 aa8.1□□□□□ -1.11
VPS13D-204ENST00000469054 RPS10P46783 165 aaKnown RBP8.1□□□□□ -1.11
VPS13D-204ENST00000469054 NIT1Q86X76 327 aa8.1□□□□□ -1.11
VPS13D-204ENST00000469054 SVBPQ8N300 66 aa8.1□□□□□ -1.11
VPS13D-204ENST00000469054 C6orf223Q8N319 242 aa8.1□□□□□ -1.11
VPS13D-204ENST00000469054 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
VPS13D-204ENST00000469054 ST20Q9HBF5 79 aa8.1□□□□□ -1.11
VPS13D-204ENST00000469054 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 TRAV9-1A0A075B6T8 112 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 SMKR1H3BMG3 65 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 RTL8CO15255 209 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 SNAPINO95295 136 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 PPP1R17O96001 155 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 IGHV3-30P01768 117 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 IGHV3-33P01772 117 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 IGHV3-30-3P0DP02 117 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 IGHV3-30-5P0DP03 117 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 S100PP25815 95 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 IQCJQ1A5X6 159 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 SLC7A5P1Q8MH63 180 aa8.09□□□□□ -1.11
VPS13D-204ENST00000469054 IGHV1-24A0A0C4DH33 117 aa8.08□□□□□ -1.12
VPS13D-204ENST00000469054 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
VPS13D-204ENST00000469054 NCR2O95944 276 aa8.08□□□□□ -1.12
VPS13D-204ENST00000469054 CKS2P33552 79 aa8.08□□□□□ -1.12
VPS13D-204ENST00000469054 COTL1Q14019 142 aa8.08□□□□□ -1.12
VPS13D-204ENST00000469054 Q8N3U1 123 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms