RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 SKA2Q8WVK7 121 aaPredicted RBP-1.16□□□□□ -2.6
SMC4-207ENST00000467263 TRAV1-2A0A0B4J238 106 aa-1.17□□□□□ -2.6
SMC4-207ENST00000467263 M0R2P5 195 aa-1.17□□□□□ -2.6
SMC4-207ENST00000467263 CMPK1P30085 196 aa-1.17□□□□□ -2.6
SMC4-207ENST00000467263 Q5VSD8 79 aa-1.17□□□□□ -2.6
SMC4-207ENST00000467263 HERC1Q15751 4861 aa-1.17□□□□□ -2.6
SMC4-207ENST00000467263 MUC22E2RYF6 1773 aaPredicted RBP-1.18□□□□□ -2.6
SMC4-207ENST00000467263 TCTE3Q8IZS6 198 aa-1.18□□□□□ -2.6
SMC4-207ENST00000467263 NDUFA12Q9UI09 145 aa-1.18□□□□□ -2.6
SMC4-207ENST00000467263 HIGD1AQ9Y241 93 aa-1.18□□□□□ -2.6
SMC4-207ENST00000467263 ERCC6Q03468 1493 aa-1.18□□□□□ -2.6
SMC4-207ENST00000467263 WNK1Q9H4A3 2382 aa-1.19□□□□□ -2.6
SMC4-207ENST00000467263 SCTP09683 121 aa-1.19□□□□□ -2.6
SMC4-207ENST00000467263 LINC01545Q5VT33 79 aa-1.19□□□□□ -2.6
SMC4-207ENST00000467263 CSPG4Q6UVK1 2322 aa-1.19□□□□□ -2.6
SMC4-207ENST00000467263 MAGOHBQ96A72 148 aaKnown RBP-1.19□□□□□ -2.6
SMC4-207ENST00000467263 DDA1Q9BW61 102 aa-1.19□□□□□ -2.6
SMC4-207ENST00000467263 MYH13Q9UKX3 1938 aa-1.2□□□□□ -2.6
SMC4-207ENST00000467263 SIPA1L3O60292 1781 aaPredicted RBP-1.2□□□□□ -2.6
SMC4-207ENST00000467263 TRAV22A0A0B4J277 110 aa-1.2□□□□□ -2.6
SMC4-207ENST00000467263 A0A1B0GX51 115 aa-1.2□□□□□ -2.6
SMC4-207ENST00000467263 WFDC6Q9BQY6 131 aa-1.2□□□□□ -2.6
SMC4-207ENST00000467263 ZMYM4Q5VZL5 1548 aa-1.2□□□□□ -2.6
SMC4-207ENST00000467263 IBTKQ9P2D0 1353 aaPredicted RBP-1.21□□□□□ -2.6
SMC4-207ENST00000467263 TSTD3H0UI37 97 aa-1.21□□□□□ -2.6
SMC4-207ENST00000467263 SPRR1AP35321 89 aa-1.21□□□□□ -2.6
SMC4-207ENST00000467263 C10orf82Q8WW14 230 aa-1.22□□□□□ -2.6
SMC4-207ENST00000467263 ACANP16112 2415 aa-1.23□□□□□ -2.61
SMC4-207ENST00000467263 NEBP20929 6669 aa-1.23□□□□□ -2.61
SMC4-207ENST00000467263 USF3Q68DE3 2245 aa-1.23□□□□□ -2.61
SMC4-207ENST00000467263 PIN1P1O15428 100 aa-1.23□□□□□ -2.61
SMC4-207ENST00000467263 Q8IZM0 81 aa-1.23□□□□□ -2.61
SMC4-207ENST00000467263 GINS2Q9Y248 185 aa-1.23□□□□□ -2.61
SMC4-207ENST00000467263 HSPB11Q9Y547 144 aa-1.23□□□□□ -2.61
SMC4-207ENST00000467263 SYNJ1O43426 1573 aa-1.23□□□□□ -2.61
SMC4-207ENST00000467263 SMIM15Q7Z3B0 74 aa-1.24□□□□□ -2.61
SMC4-207ENST00000467263 IFT172Q9UG01 1749 aa-1.24□□□□□ -2.61
SMC4-207ENST00000467263 SETXQ7Z333 2677 aaKnown RBP-1.24□□□□□ -2.61
SMC4-207ENST00000467263 CLPSL1A2RUU4 121 aa-1.25□□□□□ -2.61
SMC4-207ENST00000467263 KRTAP20-2Q3LI61 65 aa-1.25□□□□□ -2.61
SMC4-207ENST00000467263 GVINP1Q7Z2Y8 2422 aa-1.25□□□□□ -2.61
SMC4-207ENST00000467263 TRBV20-1A0A075B6N2 111 aa-1.26□□□□□ -2.61
SMC4-207ENST00000467263 PIRTP0C851 137 aa-1.26□□□□□ -2.61
SMC4-207ENST00000467263 UBE2D1P51668 147 aa-1.26□□□□□ -2.61
SMC4-207ENST00000467263 VSTM2AQ8TAG5 236 aa-1.26□□□□□ -2.61
SMC4-207ENST00000467263 RPRMQ9NS64 109 aa-1.26□□□□□ -2.61
SMC4-207ENST00000467263 ATRQ13535 2644 aa-1.26□□□□□ -2.61
SMC4-207ENST00000467263 FAM92AA1XBS5 289 aa-1.27□□□□□ -2.61
SMC4-207ENST00000467263 NCS1P62166 190 aa-1.27□□□□□ -2.61
SMC4-207ENST00000467263 C9orf116Q5BN46 136 aaPredicted RBP-1.27□□□□□ -2.61
SMC4-207ENST00000467263 SPANXN1Q5VSR9 72 aa-1.27□□□□□ -2.61
SMC4-207ENST00000467263 MIC13Q5XKP0 118 aa-1.27□□□□□ -2.61
SMC4-207ENST00000467263 FLNBO75369 2602 aaKnown RBP-1.28□□□□□ -2.61
SMC4-207ENST00000467263 M0R129 80 aa-1.28□□□□□ -2.61
SMC4-207ENST00000467263 RPL7L1Q6DKI1 246 aaKnown RBP-1.28□□□□□ -2.61
SMC4-207ENST00000467263 NPVFQ9HCQ7 196 aa-1.28□□□□□ -2.61
SMC4-207ENST00000467263 SCN3BQ9NY72 215 aa-1.28□□□□□ -2.61
SMC4-207ENST00000467263 SPCS1Q9Y6A9 102 aa-1.28□□□□□ -2.61
SMC4-207ENST00000467263 CDK5RAP2Q96SN8 1893 aa-1.29□□□□□ -2.62
SMC4-207ENST00000467263 NBEAL1Q6ZS30 2694 aa-1.29□□□□□ -2.62
SMC4-207ENST00000467263 SPTA1P02549 2419 aa-1.29□□□□□ -2.62
SMC4-207ENST00000467263 CREBBPQ92793 2442 aa-1.29□□□□□ -2.62
SMC4-207ENST00000467263 CCDC153Q494R4 210 aa-1.29□□□□□ -2.62
SMC4-207ENST00000467263 CFAP126Q5VTH2 177 aa-1.29□□□□□ -2.62
SMC4-207ENST00000467263 Q5VV11 94 aa-1.29□□□□□ -2.62
SMC4-207ENST00000467263 PLXNB2O15031 1838 aa-1.29□□□□□ -2.62
SMC4-207ENST00000467263 WNK3Q9BYP7 1800 aa-1.29□□□□□ -2.62
SMC4-207ENST00000467263 A6NIN4 97 aa-1.3□□□□□ -2.62
SMC4-207ENST00000467263 NPFFO15130 113 aa-1.3□□□□□ -2.62
SMC4-207ENST00000467263 SMIM6P0DI80 62 aa-1.3□□□□□ -2.62
SMC4-207ENST00000467263 UBE2G1P62253 170 aa-1.3□□□□□ -2.62
SMC4-207ENST00000467263 KRTAP19-8Q3LI54 63 aa-1.3□□□□□ -2.62
SMC4-207ENST00000467263 BAGE3Q86Y29 109 aa-1.31□□□□□ -2.62
SMC4-207ENST00000467263 ZNF609O15014 1411 aa-1.32□□□□□ -2.62
SMC4-207ENST00000467263 APOC4-APOC2K7ER74 178 aa-1.32□□□□□ -2.62
SMC4-207ENST00000467263 BCE1O60756 84 aa-1.32□□□□□ -2.62
SMC4-207ENST00000467263 IFNA17P01571 189 aa-1.33□□□□□ -2.62
SMC4-207ENST00000467263 NBEAP1P0C6P0 100 aa-1.33□□□□□ -2.62
SMC4-207ENST00000467263 HAMPP81172 84 aa-1.33□□□□□ -2.62
SMC4-207ENST00000467263 SAR1AQ9NR31 198 aa-1.33□□□□□ -2.62
SMC4-207ENST00000467263 SPANXCQ9NY87 97 aa-1.33□□□□□ -2.62
SMC4-207ENST00000467263 HERC2O95714 4834 aa-1.33□□□□□ -2.62
SMC4-207ENST00000467263 KDM3BQ7LBC6 1761 aa-1.34□□□□□ -2.62
SMC4-207ENST00000467263 FAM236AA0A1B0GUQ0 79 aa-1.34□□□□□ -2.62
SMC4-207ENST00000467263 FAM236BA0A1B0GV22 79 aa-1.34□□□□□ -2.62
SMC4-207ENST00000467263 DBIP07108 87 aaKnown RBP-1.34□□□□□ -2.62
SMC4-207ENST00000467263 MMGT1Q8N4V1 131 aa-1.34□□□□□ -2.62
SMC4-207ENST00000467263 SPTSSBQ8NFR3 76 aa-1.34□□□□□ -2.62
SMC4-207ENST00000467263 SELENOSQ9BQE4 189 aa-1.34□□□□□ -2.62
SMC4-207ENST00000467263 FAT1Q14517 4588 aa-1.34□□□□□ -2.62
SMC4-207ENST00000467263 MYO7BQ6PIF6 2116 aa-1.34□□□□□ -2.62
SMC4-207ENST00000467263 MYH6P13533 1939 aa-1.34□□□□□ -2.62
SMC4-207ENST00000467263 BCL9LQ86UU0 1499 aa-1.35□□□□□ -2.63
SMC4-207ENST00000467263 SPRR2BP35325 72 aa-1.35□□□□□ -2.63
SMC4-207ENST00000467263 MORN2Q502X0 79 aa-1.35□□□□□ -2.63
SMC4-207ENST00000467263 C10orf71Q711Q0 1435 aa-1.35□□□□□ -2.63
SMC4-207ENST00000467263 STAB2Q8WWQ8 2551 aa-1.35□□□□□ -2.63
SMC4-207ENST00000467263 ARHGEF10O15013 1369 aa-1.35□□□□□ -2.63
SMC4-207ENST00000467263 EP300Q09472 2414 aaPredicted RBP-1.36□□□□□ -2.63
SMC4-207ENST00000467263 FXYD6-FXYD2A0A087WZ82 144 aa-1.36□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms