RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 UQCR10Q9UDW1 63 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 RABAC1Q9UI14 185 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 ABCC3O15438 1527 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 ANK1P16157 1881 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 PLEKHH2Q8IVE3 1493 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 CDK12Q9NYV4 1490 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-205ENST00000464541 RRBP1Q9P2E9 1410 aaKnown RBP2□□□□□ -2.09
PTCD3-205ENST00000464541 HEATR1Q9H583 2144 aaKnown RBP2□□□□□ -2.09
PTCD3-205ENST00000464541 H3BQF6 201 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 K7EP34 96 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 M0R2N4 97 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 MRPS14O60783 128 aaKnown RBP2□□□□□ -2.09
PTCD3-205ENST00000464541 CYB5AP00167 134 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 UBE2D1P51668 147 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 SSBP1Q04837 148 aaKnown RBP2□□□□□ -2.09
PTCD3-205ENST00000464541 FAM74A4Q5TZK3 123 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 TRGV9Q99603 122 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 MANBALQ9NQG1 85 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 MED12LQ86YW9 2145 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 MYOFQ9NZM1 2061 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 BRWD1Q9NSI6 2320 aa2□□□□□ -2.09
PTCD3-205ENST00000464541 EML5Q05BV3 1969 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 ADAMTS7Q9UKP4 1686 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 TRPM7Q96QT4 1865 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 ZFHX2Q9C0A1 2572 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-205ENST00000464541 TRBV7-3A0A075B6L6 115 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 TRBV7-7A0A0K0K1E9 115 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 IGLV3-1P01715 115 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 SERP2Q8N6R1 65 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 AMELYQ99218 206 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 LINC00474Q9P2X8 69 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 GOLGA3Q08378 1498 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 COL4A5P29400 1685 aa1.99□□□□□ -2.09
PTCD3-205ENST00000464541 PHIPQ8WWQ0 1821 aa1.98□□□□□ -2.09
PTCD3-205ENST00000464541 BAZ2BQ9UIF8 2168 aaKnown RBP1.98□□□□□ -2.09
PTCD3-205ENST00000464541 UQCRHLA0A096LP55 91 aa1.98□□□□□ -2.09
PTCD3-205ENST00000464541 LOC285095A0A1B0GVY8 99 aa1.98□□□□□ -2.09
PTCD3-205ENST00000464541 COX6CP09669 75 aa1.98□□□□□ -2.09
PTCD3-205ENST00000464541 ELOF1P60002 83 aaKnown RBP1.98□□□□□ -2.09
PTCD3-205ENST00000464541 FAM213BQ8TBF2 198 aa1.98□□□□□ -2.09
PTCD3-205ENST00000464541 S100A16Q96FQ6 103 aaKnown RBP1.98□□□□□ -2.09
PTCD3-205ENST00000464541 FAM167A-AS1Q96KT0 104 aa1.98□□□□□ -2.09
PTCD3-205ENST00000464541 ROBO1Q9Y6N7 1651 aa1.98□□□□□ -2.09
PTCD3-205ENST00000464541 PLXNA2O75051 1894 aa1.98□□□□□ -2.09
PTCD3-205ENST00000464541 CC2D2AQ9P2K1 1620 aa1.98□□□□□ -2.09
PTCD3-205ENST00000464541 ALPK2Q86TB3 2170 aa1.98□□□□□ -2.09
PTCD3-205ENST00000464541 TNS1Q9HBL0 1735 aaKnown RBP1.97□□□□□ -2.09
PTCD3-205ENST00000464541 PRDM15P57071 1507 aaPredicted RBP1.97□□□□□ -2.09
PTCD3-205ENST00000464541 LOC110117498A0A087WWA1 95 aa1.97□□□□□ -2.09
PTCD3-205ENST00000464541 PRB1P04280 392 aa1.97□□□□□ -2.09
PTCD3-205ENST00000464541 RPL37AP61513 92 aaKnown RBP1.97□□□□□ -2.09
PTCD3-205ENST00000464541 GDF5OSQ5U4N7 250 aa1.97□□□□□ -2.09
PTCD3-205ENST00000464541 CACFD1Q9UGQ2 172 aa1.97□□□□□ -2.09
PTCD3-205ENST00000464541 PRO1854Q9UHT4 67 aa1.97□□□□□ -2.09
PTCD3-205ENST00000464541 LAMB1P07942 1786 aa1.97□□□□□ -2.09
PTCD3-205ENST00000464541 PTPRFP10586 1907 aa1.97□□□□□ -2.09
PTCD3-205ENST00000464541 PLIN4Q96Q06 1357 aa1.97□□□□□ -2.09
PTCD3-205ENST00000464541 SPAG17Q6Q759 2223 aa1.97□□□□□ -2.09
PTCD3-205ENST00000464541 TRAPPC2P0DI81 140 aa1.96□□□□□ -2.1
PTCD3-205ENST00000464541 TRAPPC2BP0DI82 140 aa1.96□□□□□ -2.1
PTCD3-205ENST00000464541 EDDM3BP56851 147 aa1.96□□□□□ -2.1
PTCD3-205ENST00000464541 SMIM11AP58511 58 aa1.96□□□□□ -2.1
PTCD3-205ENST00000464541 ZNF56Q15929 161 aa1.96□□□□□ -2.1
PTCD3-205ENST00000464541 Q6ZRN7 208 aaPredicted RBP1.96□□□□□ -2.1
PTCD3-205ENST00000464541 C20orf197Q8N268 126 aa1.96□□□□□ -2.1
PTCD3-205ENST00000464541 PLXNA4Q9HCM2 1894 aa1.96□□□□□ -2.1
PTCD3-205ENST00000464541 KDM5AP29375 1690 aaKnown RBP1.96□□□□□ -2.1
PTCD3-205ENST00000464541 ARAP2Q8WZ64 1704 aa1.95□□□□□ -2.1
PTCD3-205ENST00000464541 ABCA3Q99758 1704 aa1.95□□□□□ -2.1
PTCD3-205ENST00000464541 CHKB-CPT1BH3BT56 60 aa1.95□□□□□ -2.1
PTCD3-205ENST00000464541 UQCRHP07919 91 aa1.95□□□□□ -2.1
PTCD3-205ENST00000464541 DEFB132Q7Z7B7 95 aa1.95□□□□□ -2.1
PTCD3-205ENST00000464541 COX7B2Q8TF08 81 aa1.95□□□□□ -2.1
PTCD3-205ENST00000464541 DYNLRB1Q9NP97 96 aa1.95□□□□□ -2.1
PTCD3-205ENST00000464541 NXT2Q9NPJ8 142 aaKnown RBP1.95□□□□□ -2.1
PTCD3-205ENST00000464541 LENEPQ9Y5L5 61 aa1.95□□□□□ -2.1
PTCD3-205ENST00000464541 UNC13CQ8NB66 2214 aa1.95□□□□□ -2.1
PTCD3-205ENST00000464541 MDC1Q14676 2089 aaKnown RBP1.95□□□□□ -2.1
PTCD3-205ENST00000464541 DOCK1Q14185 1865 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 MARF1Q9Y4F3 1742 aaKnown RBP1.94□□□□□ -2.1
PTCD3-205ENST00000464541 TNRC6AQ8NDV7 1962 aaKnown RBP1.94□□□□□ -2.1
PTCD3-205ENST00000464541 CEP192Q8TEP8 1941 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 FREM1Q5H8C1 2179 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 TRBV6-7A0A0A0MS04 114 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 LOC101927531A0A1B0GV80 90 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 SYS1-DBNDD2H3BUS1 97 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 APOC3P02656 99 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 IL9P15248 144 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 CCL3L1P16619 93 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 ADIRFQ15847 76 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 XAF1Q6GPH4 301 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 ZNF625Q96I27 306 aaPredicted RBP1.94□□□□□ -2.1
PTCD3-205ENST00000464541 C20orf78Q9BR46 151 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 FN1P02751 2386 aaKnown RBP1.94□□□□□ -2.1
PTCD3-205ENST00000464541 NWD2Q9ULI1 1742 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 PXDNQ92626 1479 aa1.94□□□□□ -2.1
PTCD3-205ENST00000464541 ARHGEF12Q9NZN5 1544 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 DCAF1Q9Y4B6 1507 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 IGKV2-40A0A087WW87 121 aaPredicted RBP1.93□□□□□ -2.1
PTCD3-205ENST00000464541 PPP1R17O96001 155 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms