RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 LINC01587Q99440 93 aa7.87□□□□□ -1.15
IFT88-204ENST00000461115 CSTL1Q9H114 145 aa7.87□□□□□ -1.15
IFT88-204ENST00000461115 TRAV12-1A0A0B4J245 112 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 RS1O15537 224 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 PF4P02776 101 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 ODF1Q14990 250 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 ZFP2Q6ZN57 461 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.86□□□□□ -1.15
IFT88-204ENST00000461115 WFDC9Q8NEX5 89 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 C1QTNF4Q9BXJ3 329 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 XCL2Q9UBD3 114 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 SDHAF1A6NFY7 115 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 H7C1H1 209 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 RHODO00212 210 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 C9orf66Q5T8R8 295 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 TMEM263Q8WUH6 116 aaKnown RBP7.86□□□□□ -1.15
IFT88-204ENST00000461115 MRPS16Q9Y3D3 137 aaKnown RBP7.86□□□□□ -1.15
IFT88-204ENST00000461115 GOLT1BQ9Y3E0 138 aa7.86□□□□□ -1.15
IFT88-204ENST00000461115 FLNBO75369 2602 aaKnown RBP7.85□□□□□ -1.15
IFT88-204ENST00000461115 DAZ2Q13117 558 aaKnown RBP7.85□□□□□ -1.15
IFT88-204ENST00000461115 RHOHQ15669 191 aa7.85□□□□□ -1.15
IFT88-204ENST00000461115 CFAP126Q5VTH2 177 aa7.85□□□□□ -1.15
IFT88-204ENST00000461115 C2orf88Q9BSF0 95 aa7.85□□□□□ -1.15
IFT88-204ENST00000461115 hDV102S1A0JD36 115 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 F5H697 171 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 NUDT3O95989 172 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 IGHV3-53P01767 116 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 AZU1P20160 251 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 ZNF56Q15929 161 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 C2orf66Q6UXQ4 117 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 ERASQ7Z444 233 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 KIR2DL4Q99706 377 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 KRTAP9-2Q9BYQ4 174 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 HHLA3Q9XRX5 114 aa7.84□□□□□ -1.15
IFT88-204ENST00000461115 NOTCH3Q9UM47 2321 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 A0A087WX48 190 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 PLAC8L1A1L4L8 177 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 IGIPA6NJ69 53 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 HSBP1L1C9JCN9 74 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.83□□□□□ -1.16
IFT88-204ENST00000461115 CIDEAO60543 219 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 PRM2P04554 102 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 FAM74A4Q5TZK3 123 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 NEXN-AS1Q8NBZ9 246 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 DNAJC30Q96LL9 226 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 C18orf15Q96N68 181 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 TIMM17AQ99595 171 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 OVOL2Q9BRP0 275 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 MCRIP2Q9BUT9 160 aaKnown RBP7.83□□□□□ -1.16
IFT88-204ENST00000461115 SNHG12Q9BXW3 62 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 DKK2Q9UBU2 259 aa7.83□□□□□ -1.16
IFT88-204ENST00000461115 TEP1Q99973 2627 aaKnown RBP7.83□□□□□ -1.16
IFT88-204ENST00000461115 I3L3M4 83 aa7.82□□□□□ -1.16
IFT88-204ENST00000461115 M0R143 59 aa7.82□□□□□ -1.16
IFT88-204ENST00000461115 DLEU1O43261 78 aa7.82□□□□□ -1.16
IFT88-204ENST00000461115 COX8AP10176 69 aa7.82□□□□□ -1.16
IFT88-204ENST00000461115 PMCHL2Q9BQD1 86 aa7.82□□□□□ -1.16
IFT88-204ENST00000461115 WFDC10AQ9H1F0 79 aa7.82□□□□□ -1.16
IFT88-204ENST00000461115 CYSLTR1Q9Y271 337 aa7.82□□□□□ -1.16
IFT88-204ENST00000461115 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.81□□□□□ -1.16
IFT88-204ENST00000461115 TSHBP01222 138 aa7.81□□□□□ -1.16
IFT88-204ENST00000461115 PRSS1P07477 247 aa7.81□□□□□ -1.16
IFT88-204ENST00000461115 NPSP0C0P6 89 aa7.81□□□□□ -1.16
IFT88-204ENST00000461115 FGF6P10767 208 aa7.81□□□□□ -1.16
IFT88-204ENST00000461115 C16orf74Q96GX8 76 aa7.81□□□□□ -1.16
IFT88-204ENST00000461115 TMEM141Q96I45 108 aa7.81□□□□□ -1.16
IFT88-204ENST00000461115 SCGB3A1Q96QR1 104 aa7.81□□□□□ -1.16
IFT88-204ENST00000461115 TMEM208Q9BTX3 173 aa7.81□□□□□ -1.16
IFT88-204ENST00000461115 ATRQ13535 2644 aa7.81□□□□□ -1.16
IFT88-204ENST00000461115 F8VRH5 84 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 H0Y8G0 127 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 IGKCP01834 107 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 P0DMU3 169 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 FAM231AP0DMU4 169 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 FAM231CP0DMU5 169 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 HTN1P15515 57 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 ANKRD39Q53RE8 183 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 Q6ZN92 141 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 BOD1L2Q8IYS8 172 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 SPATA3Q8NHX4 192 aa7.8□□□□□ -1.16
IFT88-204ENST00000461115 TRAV4A0A0B4J268 109 aa7.79□□□□□ -1.16
IFT88-204ENST00000461115 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
IFT88-204ENST00000461115 DPM2O94777 84 aa7.79□□□□□ -1.16
IFT88-204ENST00000461115 HNRNPA3P51991 378 aaKnown RBP7.79□□□□□ -1.16
IFT88-204ENST00000461115 CRYBA4P53673 196 aa7.79□□□□□ -1.16
IFT88-204ENST00000461115 Q6ZSN1 163 aa7.79□□□□□ -1.16
IFT88-204ENST00000461115 C20orf203Q8NBC4 194 aa7.79□□□□□ -1.16
IFT88-204ENST00000461115 BAALCQ8WXS3 180 aa7.79□□□□□ -1.16
IFT88-204ENST00000461115 MRPL16Q9NX20 251 aaKnown RBP7.79□□□□□ -1.16
IFT88-204ENST00000461115 MRPL35Q9NZE8 188 aaKnown RBP7.79□□□□□ -1.16
IFT88-204ENST00000461115 PYGO1Q9Y3Y4 419 aa7.79□□□□□ -1.16
IFT88-204ENST00000461115 TENM1Q9UKZ4 2725 aa7.79□□□□□ -1.16
IFT88-204ENST00000461115 TRBV10-1A0A0K0K1A3 114 aa7.78□□□□□ -1.16
IFT88-204ENST00000461115 SIVA1O15304 175 aa7.78□□□□□ -1.16
IFT88-204ENST00000461115 PLNP26678 52 aa7.78□□□□□ -1.16
IFT88-204ENST00000461115 NEGR1Q7Z3B1 354 aa7.78□□□□□ -1.16
IFT88-204ENST00000461115 GTSCR1Q86UQ5 136 aa7.78□□□□□ -1.16
IFT88-204ENST00000461115 LINC00612Q8N6U2 182 aa7.78□□□□□ -1.16
IFT88-204ENST00000461115 KIR2DL5BQ8NHK3 375 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms