RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 FABP5P3A8MUU1 101 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 F5H768 121 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 M0QXV9 152 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 IFNA1P01562 189 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 CXCL1P09341 107 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 RAB5AP20339 215 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 CCL20P78556 96 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 RPL18AQ02543 176 aaKnown RBP3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 FAM162BQ5T6X4 162 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 MRPL52Q86TS9 123 aaKnown RBP3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 CHCHD10Q8WYQ3 142 aaPredicted RBP3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 SMIM12Q96EX1 92 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ZC2HC1AQ96GY0 325 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 MRPL16Q9NX20 251 aaKnown RBP3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 PYGO1Q9Y3Y4 419 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 MUC4Q99102 2169 aa3.21□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 IGKV3D-20A0A0C4DH25 116 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 KRBOX1C9JBD0 128 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 K7EN84 100 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 GNRH2O43555 120 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 PDE6DO43924 150 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 SH2D1AO60880 128 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 BCL2P10415 239 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 RNASE3P12724 160 aaKnown RBP3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 CRIP1P50238 77 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 CRYBA4P53673 196 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 MEF2BQ02080 365 aaPredicted RBP3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 SMIM29Q86T20 159 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 BAGE2Q86Y30 109 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 BOD1L2Q8IYS8 172 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 VSIG2Q96IQ7 327 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 UPK3BQ9BT76 320 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 IL36BQ9NZH7 164 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 GNG13Q9P2W3 67 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 PRO0255Q9UI72 69 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 VAX2Q9UIW0 290 aa3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 PLECQ15149 4684 aaKnown RBP3.2□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 TRAV9-2A0A087WT02 112 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 A0A096LPF7 62 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 A0A1B0GV50 99 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 RPL37AP8A6NKH3 93 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 A8MWV9 139 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 B4DEV8 164 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 C9JCJ5 164 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 TMEM250H0YL14 139 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ORM1P02763 201 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ASIPP42127 132 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 RPL35P42766 123 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 NKX2-5P52952 324 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 CCL18P55774 89 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 LINC01547P58512 204 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 KRTAP15-1Q3LI76 137 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ZNF876PQ49A33 203 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ZNF506Q5JVG8 444 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ALKAL2Q6UX46 152 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ZFP2Q6ZN57 461 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 Q6ZN92 141 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 Q6ZR54 194 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 FAM19A1Q7Z5A9 133 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 CBLN2Q8IUK8 224 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 UBE2DNLQ8IWF7 75 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 C6orf223Q8N319 242 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 SCRT2Q9NQ03 307 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 BIN3Q9NQY0 253 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 MRPS16Q9Y3D3 137 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ICOSQ9Y6W8 199 aa3.19□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 TRGV4A0A0C4DH28 118 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 A0A0J9YY99 117 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 TRBV6-4A0A1B0GX49 114 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 IGLV2-8P01709 118 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 IGHV3-53P01767 116 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 OR5AL1P0C617 328 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 S100A4P26447 101 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 PRR4Q16378 134 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 CENPWQ5EE01 88 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 CFAP126Q5VTH2 177 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 SH2D6Q7Z4S9 175 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ZNRF2Q8NHG8 242 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 LYSTQ99698 3801 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 DERL1Q9BUN8 251 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 JPT2Q9H910 190 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 HHLA3Q9XRX5 114 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 LINC00588Q9Y4M8 146 aa3.18□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 VPS13DQ5THJ4 4388 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 TRBV20OR9-2A0A075B6H5 130 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 C19orf71A6NCJ1 209 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 RBFOX3A6NFN3 312 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 H3BVH4 76 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 M0R036 132 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 SFTA3P0C7M3 94 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ARMS2P0C7Q2 107 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 MGST1P10620 155 aaKnown RBP3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 SRIP30626 198 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 GNG4P50150 75 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 RPS20P60866 119 aaKnown RBP3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 RHOHQ15669 191 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ESRGQ1W209 222 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 TTC32Q5I0X7 151 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 NEGR1Q7Z3B1 354 aa3.17□□□□□ -1.9
RNU6ATAC28P-201ENST00000459249 ZFP82Q8N141 532 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms