RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 C1orf134Q5TEV5 83 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 FAM78BQ5VT40 261 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
LINC00393-202ENST00000452852 LYZL2Q7Z4W2 148 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 FAM19A5Q7Z5A7 132 aaPredicted RBP2.6□□□□□ -1.99
LINC00393-202ENST00000452852 ZNF709Q8N972 641 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 C15orf53Q8NAA6 179 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 TRGV9Q99603 122 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 SLC35B3Q9H1N7 401 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 MIXL1Q9H2W2 232 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 DOK5Q9P104 306 aa2.6□□□□□ -1.99
LINC00393-202ENST00000452852 HSPG2P98160 4391 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 IGKV1D-37A0A075B6S9 117 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 A0A0J9YX75 114 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 CCDC160A6NGH7 325 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 ZNF98A6NK75 572 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 SYNGR2O43760 224 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 HYPMO75409 117 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 IL5P05113 134 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 HTN1P15515 57 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 RPL7P18124 248 aaKnown RBP2.59□□□□□ -1.99
LINC00393-202ENST00000452852 S100A5P33763 92 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 TMBIM6P55061 237 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 CCL18P55774 89 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 DEFB1P60022 68 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 RHOBP62745 196 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 CTAG1AP78358 180 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 SPCS2Q15005 226 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 SPINK13Q1W4C9 94 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 TOMM5Q8N4H5 51 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 MIR7-3HGQ8N6C7 128 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 MCFD2Q8NI22 146 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 IGF2BP2-AS1Q96M15 143 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 SLC25A21Q9BQT8 299 aaPredicted RBP2.59□□□□□ -1.99
LINC00393-202ENST00000452852 SCRT1Q9BWW7 348 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 SPANXB1Q9NS25 103 aaPredicted RBP2.59□□□□□ -1.99
LINC00393-202ENST00000452852 HIGD1AQ9Y241 93 aa2.59□□□□□ -1.99
LINC00393-202ENST00000452852 HERC2O95714 4834 aa2.59□□□□□ -2
LINC00393-202ENST00000452852 C7orf66A4D0T2 115 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 C16orf90A8MZG2 172 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 K7EPK0 472 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 M0R2Z0 102 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 SSSCA1O60232 199 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 PITX3O75364 302 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 SFT2D2O95562 160 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 ATP5G1P05496 136 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 OR5G3P0C626 314 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 DEFB130BP0DP73 79 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 DEFB130AP0DP74 79 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 ATP5G3P48201 142 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 KRTAP10-1P60331 282 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 HIST1H1AQ02539 215 aaPredicted RBP2.58□□□□□ -2
LINC00393-202ENST00000452852 CENPWQ5EE01 88 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 CYP2G1PQ6ZSU1 146 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 TMEM144Q7Z5S9 345 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 BAP18Q8IXM2 172 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 C1orf158Q8N1D5 194 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 RNF182Q8N6D2 247 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 SPANXA2-OT1Q8N9U9 137 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 DEDD2Q8WXF8 326 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 PSENENQ9NZ42 101 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 DNAH11Q96DT5 4516 aa2.58□□□□□ -2
LINC00393-202ENST00000452852 TRAV12-2A0A075B6T6 113 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 IGKV1OR2-108A0A075B7D4 117 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 H3BRN7 92 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 H7BYZ3 331 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 SSNA1O43805 119 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 IFNA5P01569 189 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 CXCL2P19875 107 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 CXCL3P19876 107 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 NKX2-5P52952 324 aaPredicted RBP2.57□□□□□ -2
LINC00393-202ENST00000452852 RRAS2P62070 204 aaPredicted RBP2.57□□□□□ -2
LINC00393-202ENST00000452852 SLC38A11Q08AI6 406 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 PPP1R1AQ13522 171 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 TRIQKQ629K1 86 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 SLC25A34Q6PIV7 304 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 LCN15Q6UWW0 184 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 OR10P1Q8NGE3 313 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 OR8A1Q8NGG7 326 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 ASB13Q8WXK3 278 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 PTH2Q96A98 100 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 SLC50A1Q9BRV3 221 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 SHANK2-AS3Q9BTD1 123 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 MAP1LC3AQ9H492 121 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 NPVFQ9HCQ7 196 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 TIMM8BQ9Y5J9 83 aaPredicted RBP2.57□□□□□ -2
LINC00393-202ENST00000452852 MUC4Q99102 2169 aa2.57□□□□□ -2
LINC00393-202ENST00000452852 IGKV2D-24A0A075B6R9 120 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 NBDYA0A0U1RRE5 68 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 C9orf170A2RU37 121 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 NAP1L6A6NFF2 107 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 A8MTW9 85 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 FNDC10F2Z333 226 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 TMEM250H0YL14 139 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 ZNF324O75467 553 aaPredicted RBP2.56□□□□□ -2
LINC00393-202ENST00000452852 PRM2P04554 102 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 METTL15P1P0C7V9 234 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms