RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 EIF5A2Q9GZV4 153 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-205ENST00000452128 SRSF3P84103 164 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-205ENST00000452128 LAGE3Q14657 143 aa10.76□□□□□ -0.69
SCAMP4-205ENST00000452128 ZNF56Q15929 161 aa10.76□□□□□ -0.69
SCAMP4-205ENST00000452128 NTM-AS1Q6ZSK4 140 aa10.76□□□□□ -0.69
SCAMP4-205ENST00000452128 TPPP3Q9BW30 176 aa10.76□□□□□ -0.69
SCAMP4-205ENST00000452128 C16orf90A8MZG2 172 aa10.75□□□□□ -0.69
SCAMP4-205ENST00000452128 CT83Q5H943 113 aa10.75□□□□□ -0.69
SCAMP4-205ENST00000452128 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
SCAMP4-205ENST00000452128 SMIM7Q9BQ49 75 aa10.75□□□□□ -0.69
SCAMP4-205ENST00000452128 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
SCAMP4-205ENST00000452128 DNAH8Q96JB1 4490 aa10.75□□□□□ -0.69
SCAMP4-205ENST00000452128 TRBV6-8A0A0A6YYG3 113 aa10.74□□□□□ -0.69
SCAMP4-205ENST00000452128 SUMO4Q6EEV6 95 aa10.74□□□□□ -0.69
SCAMP4-205ENST00000452128 F5H697 171 aa10.73□□□□□ -0.69
SCAMP4-205ENST00000452128 GATCO43716 136 aaKnown RBP10.73□□□□□ -0.69
SCAMP4-205ENST00000452128 OSTCQ9NRP0 149 aa10.73□□□□□ -0.69
SCAMP4-205ENST00000452128 PGPEP1Q9NXJ5 209 aa10.73□□□□□ -0.69
SCAMP4-205ENST00000452128 ZNF727A8MUV8 499 aa10.72□□□□□ -0.69
SCAMP4-205ENST00000452128 A8MWL6 223 aa10.72□□□□□ -0.69
SCAMP4-205ENST00000452128 TRGC1P0CF51 173 aa10.72□□□□□ -0.69
SCAMP4-205ENST00000452128 SMIM17P0DL12 118 aa10.72□□□□□ -0.69
SCAMP4-205ENST00000452128 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
SCAMP4-205ENST00000452128 DNAJC30Q96LL9 226 aa10.72□□□□□ -0.69
SCAMP4-205ENST00000452128 CHCHD7Q9BUK0 85 aa10.72□□□□□ -0.69
SCAMP4-205ENST00000452128 DPH3P1Q9H4G8 78 aa10.72□□□□□ -0.69
SCAMP4-205ENST00000452128 CDK2AP2O75956 126 aa10.71□□□□□ -0.69
SCAMP4-205ENST00000452128 CEBPGP53567 150 aa10.71□□□□□ -0.69
SCAMP4-205ENST00000452128 ERVFC1-1P60608 527 aa10.71□□□□□ -0.69
SCAMP4-205ENST00000452128 SMDT1Q9H4I9 107 aa10.71□□□□□ -0.69
SCAMP4-205ENST00000452128 PCLOQ9Y6V0 5065 aa10.71□□□□□ -0.7
SCAMP4-205ENST00000452128 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.7
SCAMP4-205ENST00000452128 TWIST1Q15672 202 aa10.7□□□□□ -0.7
SCAMP4-205ENST00000452128 FAM74A3Q4VXF1 159 aa10.7□□□□□ -0.7
SCAMP4-205ENST00000452128 RASL11AQ6T310 242 aa10.7□□□□□ -0.7
SCAMP4-205ENST00000452128 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
SCAMP4-205ENST00000452128 TSKUQ8WUA8 353 aa10.7□□□□□ -0.7
SCAMP4-205ENST00000452128 V9GYV3 84 aa10.7□□□□□ -0.7
SCAMP4-205ENST00000452128 TRAV8-3A0A0A6YYJ7 113 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 FAM231BA6NCW3 169 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 RPL23P62829 140 aaKnown RBP10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 WFDC2Q14508 124 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 IQCJQ1A5X6 159 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 TMEM241Q24JQ0 296 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 ATRAIDQ6UW56 229 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 ISOC2Q96AB3 205 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 GFRA4Q9GZZ7 299 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 Q9HAA7 133 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 NIT2Q9NQR4 276 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 ABCA13Q86UQ4 5058 aa10.69□□□□□ -0.7
SCAMP4-205ENST00000452128 FAT1Q14517 4588 aa10.68□□□□□ -0.7
SCAMP4-205ENST00000452128 H7C1H1 209 aa10.68□□□□□ -0.7
SCAMP4-205ENST00000452128 MGPP08493 103 aa10.68□□□□□ -0.7
SCAMP4-205ENST00000452128 CDPF1Q6NVV7 123 aa10.68□□□□□ -0.7
SCAMP4-205ENST00000452128 FRZBQ92765 325 aa10.68□□□□□ -0.7
SCAMP4-205ENST00000452128 PGLYRP4Q96LB8 373 aa10.68□□□□□ -0.7
SCAMP4-205ENST00000452128 PEA15Q15121 130 aa10.67□□□□□ -0.7
SCAMP4-205ENST00000452128 TMEM97Q5BJF2 176 aa10.67□□□□□ -0.7
SCAMP4-205ENST00000452128 ENHOQ6UWT2 76 aa10.67□□□□□ -0.7
SCAMP4-205ENST00000452128 KLK12Q9UKR0 248 aa10.67□□□□□ -0.7
SCAMP4-205ENST00000452128 MPV17L2Q567V2 206 aa10.66□□□□□ -0.7
SCAMP4-205ENST00000452128 TM2D2Q9BX73 214 aa10.66□□□□□ -0.7
SCAMP4-205ENST00000452128 TRAV26-2A0A0B4J265 109 aa10.65□□□□□ -0.7
SCAMP4-205ENST00000452128 HIGD1CA8MV81 97 aa10.65□□□□□ -0.7
SCAMP4-205ENST00000452128 EREGO14944 169 aa10.65□□□□□ -0.7
SCAMP4-205ENST00000452128 KRTAP10-1P60331 282 aa10.65□□□□□ -0.7
SCAMP4-205ENST00000452128 KRTAP4-5Q9BYR2 181 aa10.65□□□□□ -0.7
SCAMP4-205ENST00000452128 PRR34Q9NV39 138 aa10.65□□□□□ -0.7
SCAMP4-205ENST00000452128 NAT8Q9UHE5 227 aa10.65□□□□□ -0.7
SCAMP4-205ENST00000452128 A0A087WX48 190 aa10.64□□□□□ -0.71
SCAMP4-205ENST00000452128 KRTAP26-1Q6PEX3 210 aa10.64□□□□□ -0.71
SCAMP4-205ENST00000452128 Q8N814 137 aa10.64□□□□□ -0.71
SCAMP4-205ENST00000452128 NUP35Q8NFH5 326 aa10.64□□□□□ -0.71
SCAMP4-205ENST00000452128 RNF185Q96GF1 192 aa10.64□□□□□ -0.71
SCAMP4-205ENST00000452128 A0A1B0GUT8 65 aa10.63□□□□□ -0.71
SCAMP4-205ENST00000452128 TMEM262E9PQX1 116 aa10.63□□□□□ -0.71
SCAMP4-205ENST00000452128 GAS8-AS1O95177 125 aa10.63□□□□□ -0.71
SCAMP4-205ENST00000452128 RBX1P62877 108 aa10.63□□□□□ -0.71
SCAMP4-205ENST00000452128 ELOBQ15370 118 aa10.63□□□□□ -0.71
SCAMP4-205ENST00000452128 Q8N976 141 aa10.63□□□□□ -0.71
SCAMP4-205ENST00000452128 TMEM191AQ9H0A3 160 aa10.63□□□□□ -0.71
SCAMP4-205ENST00000452128 URGCP-MRPS24S4R325 110 aa10.63□□□□□ -0.71
SCAMP4-205ENST00000452128 TRBV25-1A0A075B6N4 114 aa10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 TRBV6-5A0A0K0K1A5 114 aa10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 SMIM27A0A1W2PRY6 76 aa10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 PSCAO43653 123 aa10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 XGP55808 180 aa10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 IFITM2Q01629 132 aa10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 C15orf54Q8N8G6 183 aa10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 UBE2WQ96B02 151 aa10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 CHCHD5Q9BSY4 110 aa10.62□□□□□ -0.71
SCAMP4-205ENST00000452128 A0A1B0GUV1 79 aa10.61□□□□□ -0.71
SCAMP4-205ENST00000452128 PKIAP61925 76 aa10.61□□□□□ -0.71
SCAMP4-205ENST00000452128 NTN5Q8WTR8 489 aaPredicted RBP10.61□□□□□ -0.71
SCAMP4-205ENST00000452128 COX11Q9Y6N1 276 aa10.61□□□□□ -0.71
SCAMP4-205ENST00000452128 RAB4AP20338 218 aa10.6□□□□□ -0.71
SCAMP4-205ENST00000452128 Q0VG73 95 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms