RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 DIDO1Q9BTC0 2240 aaKnown RBP2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 NACAE9PAV3 2078 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 IGKV1D-17A0A075B6S4 117 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 LYRM9A8MSI8 78 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 CCL21O00585 134 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 SOCS3O14543 225 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 NDUFB3O43676 98 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 LHBP01229 141 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 CGB3P0DN86 165 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 CGB7P0DN87 165 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 ZNF32P17041 273 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 CD52P31358 61 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 RPL28P46779 137 aaKnown RBP2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 APOC4P55056 127 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 LINC00205P59089 165 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 MIAQ16674 131 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 ESRGQ1W209 222 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 S100A7L2Q5SY68 101 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 ADAMTSL4-AS1Q5T5F5 129 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 PRNTQ86SH4 94 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 WDR86Q86TI4 376 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 C20orf197Q8N268 126 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 SPATA3Q8NHX4 192 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 UBALD1Q8TB05 177 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 LINC01560Q8TB33 94 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 CLEC2BQ92478 149 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 TMEM141Q96I45 108 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 SCGB3A1Q96QR1 104 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 RPP25Q9BUL9 199 aaKnown RBP2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 LINC00846Q9NV44 126 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 SPRR3Q9UBC9 169 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 MOB4Q9Y3A3 225 aa2.59□□□□□ -1.99
HMGB3P8-201ENST00000449709 INTS1Q8N201 2190 aaKnown RBP2.59□□□□□ -2
HMGB3P8-201ENST00000449709 A0A087WVE0 104 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 A0A087WW49 117 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 C10orf142B7Z368 130 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 C8orf87E5RJ46 101 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 M0R378 163 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 NDUFS5O43920 106 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 IGHV1-69P01742 117 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 MIFP14174 115 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 LGALS3P17931 250 aaKnown RBP2.58□□□□□ -2
HMGB3P8-201ENST00000449709 TMEM30BQ3MIR4 351 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 FAM229BQ4G0N7 80 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 RUSC1-AS1Q66K80 236 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 C2orf66Q6UXQ4 117 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 ZNF833PQ6ZTB9 187 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 NUP37Q8NFH4 326 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 FAM218AQ96MZ4 157 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 CCL13Q99616 98 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 LINC00574Q9H8X3 128 aa2.58□□□□□ -2
HMGB3P8-201ENST00000449709 IGHV7-4-1A0A0J9YVY3 117 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 A6NN06 94 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 F8WEM9 126 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 H3BRN7 92 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 TRBV12-3P01733 135 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 CTSGP08311 255 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 PLA2G2AP14555 144 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 KRTAP10-11P60412 298 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 BLCAPP62952 87 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 ECSCRQ19T08 205 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 Q6ZTC4 211 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 OVOL2Q9BRP0 275 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 DEFB126Q9BYW3 111 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 BPESC1Q9GZL8 116 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 MRPL36Q9P0J6 103 aaKnown RBP2.57□□□□□ -2
HMGB3P8-201ENST00000449709 PCNTO95613 3336 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 PCNX2A6NKB5 2137 aa2.57□□□□□ -2
HMGB3P8-201ENST00000449709 COL27A1Q8IZC6 1860 aaPredicted RBP2.56□□□□□ -2
HMGB3P8-201ENST00000449709 TRAV8-3A0A0A6YYJ7 113 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 IGHV1-18A0A0C4DH31 117 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 hDV103S1A0JD37 113 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 K7EMT4 169 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 PPP1R17O96001 155 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 BAALC-AS2P0C853 105 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 PATE4P0C8F1 98 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 CD28P10747 220 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 CCL4P13236 92 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 POLR2KP53803 58 aaKnown RBP2.56□□□□□ -2
HMGB3P8-201ENST00000449709 LPAL2Q16609 132 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 Q1RN00 199 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 MRGPRG-AS1Q2M3A8 158 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 TMEM167AQ8TBQ9 72 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 LINC00167Q96N53 147 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 RP1P56715 2156 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 RTTNQ86VV8 2226 aa2.56□□□□□ -2
HMGB3P8-201ENST00000449709 IGKV3D-15A0A087WSY6 115 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 IGKV3D-7A0A0C4DH55 119 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 TRBV6-5A0A0K0K1A5 114 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 LCE6AA0A183 80 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 EPOPA6NHQ4 379 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 SMIM1B2RUZ4 78 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 M0R3E3 92 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 DNAL4O96015 105 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 IGLV3-19P01714 112 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 TRGV3P03979 118 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 TNCP24821 2201 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 MAGEA5P43359 124 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms