RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CARD19Q96LW7 228 aa14.09□□□□□ -0.15
SDCBP-204ENST00000447182 IGKV3-20P01619 116 aa14.09□□□□□ -0.15
SDCBP-204ENST00000447182 PTH2Q96A98 100 aa14.09□□□□□ -0.15
SDCBP-204ENST00000447182 A8MWV9 139 aa14.08□□□□□ -0.16
SDCBP-204ENST00000447182 AVPP01185 164 aa14.08□□□□□ -0.16
SDCBP-204ENST00000447182 ATP5J2P56134 94 aa14.08□□□□□ -0.16
SDCBP-204ENST00000447182 EDA2RQ9HAV5 297 aa14.08□□□□□ -0.16
SDCBP-204ENST00000447182 IGLV4-3A0A075B6K6 122 aa14.08□□□□□ -0.16
SDCBP-204ENST00000447182 A0A0B4J2C4 111 aa14.08□□□□□ -0.16
SDCBP-204ENST00000447182 A4D1N5 150 aa14.08□□□□□ -0.16
SDCBP-204ENST00000447182 SPINK13Q1W4C9 94 aa14.08□□□□□ -0.16
SDCBP-204ENST00000447182 TRGV11A0A075B6L2 103 aa14.06□□□□□ -0.16
SDCBP-204ENST00000447182 M0QXV9 152 aa14.06□□□□□ -0.16
SDCBP-204ENST00000447182 IGHV3-33P01772 117 aa14.06□□□□□ -0.16
SDCBP-204ENST00000447182 FHL3Q13643 280 aa14.06□□□□□ -0.16
SDCBP-204ENST00000447182 TMEM263Q8WUH6 116 aaKnown RBP14.06□□□□□ -0.16
SDCBP-204ENST00000447182 B4DSR2 109 aa14.06□□□□□ -0.16
SDCBP-204ENST00000447182 EIF4EBP3O60516 100 aaPredicted RBP14.06□□□□□ -0.16
SDCBP-204ENST00000447182 SCGB1C2P0DMR2 95 aa14.06□□□□□ -0.16
SDCBP-204ENST00000447182 PRORYQ9H606 182 aa14.06□□□□□ -0.16
SDCBP-204ENST00000447182 PYGO1Q9Y3Y4 419 aa14.06□□□□□ -0.16
SDCBP-204ENST00000447182 GATA3P23771 443 aa14.05□□□□□ -0.16
SDCBP-204ENST00000447182 CRYBA4P53673 196 aa14.05□□□□□ -0.16
SDCBP-204ENST00000447182 C10orf99Q6UWK7 81 aa14.05□□□□□ -0.16
SDCBP-204ENST00000447182 A0A0J9YXV3 536 aa14.04□□□□□ -0.16
SDCBP-204ENST00000447182 M0R2P5 195 aa14.04□□□□□ -0.16
SDCBP-204ENST00000447182 MUSTN1Q8IVN3 82 aa14.03□□□□□ -0.16
SDCBP-204ENST00000447182 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.03□□□□□ -0.16
SDCBP-204ENST00000447182 TRAV2A0A0B4J234 112 aa14.03□□□□□ -0.16
SDCBP-204ENST00000447182 IGHV4-59P01825 116 aa14.03□□□□□ -0.16
SDCBP-204ENST00000447182 Q6ZUT4 128 aa14.03□□□□□ -0.16
SDCBP-204ENST00000447182 ERG28Q9UKR5 140 aa14.03□□□□□ -0.16
SDCBP-204ENST00000447182 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.03□□□□□ -0.16
SDCBP-204ENST00000447182 ANKRD29Q8N6D5 301 aa14.02□□□□□ -0.16
SDCBP-204ENST00000447182 SPINK8P0C7L1 97 aa14.02□□□□□ -0.17
SDCBP-204ENST00000447182 CKS1BP61024 79 aa14.02□□□□□ -0.17
SDCBP-204ENST00000447182 MRPS36P82909 103 aaKnown RBP14.02□□□□□ -0.17
SDCBP-204ENST00000447182 RAX2Q96IS3 184 aa14.02□□□□□ -0.17
SDCBP-204ENST00000447182 A0A0J9YXY3 114 aa14.01□□□□□ -0.17
SDCBP-204ENST00000447182 SYNJ2BPP57105 145 aa14.01□□□□□ -0.17
SDCBP-204ENST00000447182 DEFB112Q30KQ8 113 aa14.01□□□□□ -0.17
SDCBP-204ENST00000447182 FAM104AQ969W3 186 aa14.01□□□□□ -0.17
SDCBP-204ENST00000447182 DOPEY2Q9Y3R5 2298 aa14.01□□□□□ -0.17
SDCBP-204ENST00000447182 IGHV3-64A0A075B6Q5 118 aa14□□□□□ -0.17
SDCBP-204ENST00000447182 SLC25A20O43772 301 aa14□□□□□ -0.17
SDCBP-204ENST00000447182 MT-ATP8P03928 68 aa14□□□□□ -0.17
SDCBP-204ENST00000447182 IGHV3-30-3P0DP02 117 aa14□□□□□ -0.17
SDCBP-204ENST00000447182 XGP55808 180 aa14□□□□□ -0.17
SDCBP-204ENST00000447182 NCOR2Q9Y618 2525 aa14□□□□□ -0.17
SDCBP-204ENST00000447182 TGFAP01135 160 aa13.99□□□□□ -0.17
SDCBP-204ENST00000447182 RBMY1A1P0DJD3 496 aaKnown RBP13.99□□□□□ -0.17
SDCBP-204ENST00000447182 RBMY1CP0DJD4 496 aa13.99□□□□□ -0.17
SDCBP-204ENST00000447182 RBMY1FQ15415 496 aaKnown RBP13.99□□□□□ -0.17
SDCBP-204ENST00000447182 COL12A1Q99715 3063 aa13.98□□□□□ -0.17
SDCBP-204ENST00000447182 TMEM262E9PQX1 116 aa13.98□□□□□ -0.17
SDCBP-204ENST00000447182 CD28P10747 220 aa13.98□□□□□ -0.17
SDCBP-204ENST00000447182 LINC01600Q96MT4 127 aa13.98□□□□□ -0.17
SDCBP-204ENST00000447182 LITAFQ99732 161 aa13.98□□□□□ -0.17
SDCBP-204ENST00000447182 TIMM21Q9BVV7 248 aa13.98□□□□□ -0.17
SDCBP-204ENST00000447182 CSPG4Q6UVK1 2322 aa13.98□□□□□ -0.17
SDCBP-204ENST00000447182 ITPR1Q14643 2758 aa13.98□□□□□ -0.17
SDCBP-204ENST00000447182 SPTBN4Q9H254 2564 aa13.98□□□□□ -0.17
SDCBP-204ENST00000447182 ELANEP08246 267 aa13.97□□□□□ -0.17
SDCBP-204ENST00000447182 SPXQ9BT56 116 aa13.97□□□□□ -0.17
SDCBP-204ENST00000447182 A8MTW9 85 aa13.97□□□□□ -0.17
SDCBP-204ENST00000447182 C9JAW5 83 aa13.97□□□□□ -0.17
SDCBP-204ENST00000447182 HOXD3P31249 432 aaPredicted RBP13.97□□□□□ -0.17
SDCBP-204ENST00000447182 PIK3CD-AS1Q5SR53 167 aa13.97□□□□□ -0.17
SDCBP-204ENST00000447182 CHD8Q9HCK8 2581 aa13.97□□□□□ -0.17
SDCBP-204ENST00000447182 DSCR9P59020 149 aa13.96□□□□□ -0.17
SDCBP-204ENST00000447182 TRBV30A0A0K0K1B3 111 aa13.96□□□□□ -0.18
SDCBP-204ENST00000447182 UBE2E2Q96LR5 201 aa13.96□□□□□ -0.18
SDCBP-204ENST00000447182 SORL1Q92673 2214 aa13.95□□□□□ -0.18
SDCBP-204ENST00000447182 IGHV1-58A0A0C4DH39 117 aa13.95□□□□□ -0.18
SDCBP-204ENST00000447182 ATXN8Q156A1 80 aa13.95□□□□□ -0.18
SDCBP-204ENST00000447182 Q5PR19 223 aa13.95□□□□□ -0.18
SDCBP-204ENST00000447182 SPANXDQ9BXN6 97 aa13.94□□□□□ -0.18
SDCBP-204ENST00000447182 SPANXCQ9NY87 97 aa13.94□□□□□ -0.18
SDCBP-204ENST00000447182 TNFRSF18Q9Y5U5 241 aa13.94□□□□□ -0.18
SDCBP-204ENST00000447182 SPG11Q96JI7 2443 aa13.94□□□□□ -0.18
SDCBP-204ENST00000447182 TINCRA0A1B0GVN0 87 aa13.94□□□□□ -0.18
SDCBP-204ENST00000447182 LINC01356Q8N9X3 169 aa13.94□□□□□ -0.18
SDCBP-204ENST00000447182 DUX5Q96PT3 197 aa13.94□□□□□ -0.18
SDCBP-204ENST00000447182 H7C2G1 150 aa13.93□□□□□ -0.18
SDCBP-204ENST00000447182 PROK1P58294 105 aa13.93□□□□□ -0.18
SDCBP-204ENST00000447182 SPANXA1Q9NS26 97 aa13.93□□□□□ -0.18
SDCBP-204ENST00000447182 PRRC2AP48634 2157 aaKnown RBP13.93□□□□□ -0.18
SDCBP-204ENST00000447182 IGHV3-73A0A0B4J1V6 119 aa13.93□□□□□ -0.18
SDCBP-204ENST00000447182 Q1RN00 199 aa13.93□□□□□ -0.18
SDCBP-204ENST00000447182 LINC01620Q4KN68 170 aa13.93□□□□□ -0.18
SDCBP-204ENST00000447182 GEMIN7Q9H840 131 aaKnown RBP13.93□□□□□ -0.18
SDCBP-204ENST00000447182 KNCNA6PVL3 124 aa13.92□□□□□ -0.18
SDCBP-204ENST00000447182 J3QLI3 93 aa13.92□□□□□ -0.18
SDCBP-204ENST00000447182 CHCHD7Q9BUK0 85 aa13.92□□□□□ -0.18
SDCBP-204ENST00000447182 TRAV8-3A0A0A6YYJ7 113 aa13.91□□□□□ -0.18
SDCBP-204ENST00000447182 CEMP1Q6PRD7 247 aaPredicted RBP13.91□□□□□ -0.18
SDCBP-204ENST00000447182 VSIG2Q96IQ7 327 aa13.91□□□□□ -0.18
SDCBP-204ENST00000447182 NDUFA12Q9UI09 145 aa13.91□□□□□ -0.18
SDCBP-204ENST00000447182 VPREB3Q9UKI3 123 aa13.91□□□□□ -0.18
SDCBP-204ENST00000447182 UBE2D4Q9Y2X8 147 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms