RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 A0A087WW49 117 aa12.12□□□□□ -0.47
PIKFYVE-206ENST00000443896 NXPH4O95158 308 aa12.12□□□□□ -0.47
PIKFYVE-206ENST00000443896 SYNJ2BPP57105 145 aa12.12□□□□□ -0.47
PIKFYVE-206ENST00000443896 PPDPFLQ8WWR9 84 aa12.12□□□□□ -0.47
PIKFYVE-206ENST00000443896 ZNF688P0C7X2 276 aa12.12□□□□□ -0.47
PIKFYVE-206ENST00000443896 ODF3Q96PU9 254 aa12.12□□□□□ -0.47
PIKFYVE-206ENST00000443896 ZMAT4Q9H898 229 aa12.12□□□□□ -0.47
PIKFYVE-206ENST00000443896 K7EQG2 157 aa12.11□□□□□ -0.47
PIKFYVE-206ENST00000443896 C14orf178Q8N769 122 aaPredicted RBP12.11□□□□□ -0.47
PIKFYVE-206ENST00000443896 SMIM2Q9BVW6 85 aa12.11□□□□□ -0.47
PIKFYVE-206ENST00000443896 PRRC2AP48634 2157 aaKnown RBP12.11□□□□□ -0.47
PIKFYVE-206ENST00000443896 SNCGO76070 127 aa12.11□□□□□ -0.47
PIKFYVE-206ENST00000443896 TCL1BO95988 128 aa12.11□□□□□ -0.47
PIKFYVE-206ENST00000443896 PSMG4Q5JS54 123 aa12.11□□□□□ -0.47
PIKFYVE-206ENST00000443896 RASL10AQ92737 203 aa12.11□□□□□ -0.47
PIKFYVE-206ENST00000443896 SNRPD3P62318 126 aaKnown RBP12.1□□□□□ -0.47
PIKFYVE-206ENST00000443896 Q96MF0 132 aa12.1□□□□□ -0.47
PIKFYVE-206ENST00000443896 HOXD3P31249 432 aaPredicted RBP12.1□□□□□ -0.47
PIKFYVE-206ENST00000443896 EMP1P54849 157 aa12.1□□□□□ -0.47
PIKFYVE-206ENST00000443896 KLHL30-AS1Q8NEE0 82 aa12.1□□□□□ -0.47
PIKFYVE-206ENST00000443896 A0A0J9YX75 114 aa12.1□□□□□ -0.47
PIKFYVE-206ENST00000443896 ATP5LO75964 103 aa12.1□□□□□ -0.47
PIKFYVE-206ENST00000443896 MEIG1Q5JSS6 88 aa12.09□□□□□ -0.47
PIKFYVE-206ENST00000443896 TEN1Q86WV5 123 aa12.09□□□□□ -0.47
PIKFYVE-206ENST00000443896 KRTAP1-3Q8IUG1 177 aa12.09□□□□□ -0.47
PIKFYVE-206ENST00000443896 Q8N2B8 174 aa12.09□□□□□ -0.47
PIKFYVE-206ENST00000443896 POM121L12Q8N7R1 296 aa12.09□□□□□ -0.47
PIKFYVE-206ENST00000443896 M0QXV9 152 aa12.09□□□□□ -0.47
PIKFYVE-206ENST00000443896 SUMO2P61956 95 aaKnown RBP12.09□□□□□ -0.47
PIKFYVE-206ENST00000443896 PLEKHB2Q96CS7 222 aa12.09□□□□□ -0.47
PIKFYVE-206ENST00000443896 RAX2Q96IS3 184 aa12.09□□□□□ -0.47
PIKFYVE-206ENST00000443896 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.47
PIKFYVE-206ENST00000443896 A8MWV9 139 aa12.08□□□□□ -0.48
PIKFYVE-206ENST00000443896 PTPN13Q12923 2485 aa12.08□□□□□ -0.48
PIKFYVE-206ENST00000443896 TRPT1Q86TN4 253 aaKnown RBP12.08□□□□□ -0.48
PIKFYVE-206ENST00000443896 TRAV12-3A0A0B4J271 114 aa12.07□□□□□ -0.48
PIKFYVE-206ENST00000443896 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
PIKFYVE-206ENST00000443896 KIF25-AS1Q9Y6Z4 181 aa12.07□□□□□ -0.48
PIKFYVE-206ENST00000443896 CENPEQ02224 2701 aa12.07□□□□□ -0.48
PIKFYVE-206ENST00000443896 MGPP08493 103 aa12.07□□□□□ -0.48
PIKFYVE-206ENST00000443896 DUX5Q96PT3 197 aa12.07□□□□□ -0.48
PIKFYVE-206ENST00000443896 C9JAW5 83 aa12.06□□□□□ -0.48
PIKFYVE-206ENST00000443896 IFITM1P13164 125 aa12.06□□□□□ -0.48
PIKFYVE-206ENST00000443896 MXRA5Q9NR99 2828 aa12.06□□□□□ -0.48
PIKFYVE-206ENST00000443896 ORMDL2Q53FV1 153 aa12.06□□□□□ -0.48
PIKFYVE-206ENST00000443896 YAE1D1Q9NRH1 226 aa12.06□□□□□ -0.48
PIKFYVE-206ENST00000443896 LINC00315P59091 139 aa12.06□□□□□ -0.48
PIKFYVE-206ENST00000443896 TNFRSF18Q9Y5U5 241 aa12.06□□□□□ -0.48
PIKFYVE-206ENST00000443896 MYMXA0A1B0GTQ4 84 aa12.05□□□□□ -0.48
PIKFYVE-206ENST00000443896 PPP1R17O96001 155 aa12.05□□□□□ -0.48
PIKFYVE-206ENST00000443896 CD7P09564 240 aa12.05□□□□□ -0.48
PIKFYVE-206ENST00000443896 MRPL23Q16540 153 aaKnown RBP12.05□□□□□ -0.48
PIKFYVE-206ENST00000443896 MUC4Q99102 2169 aa12.05□□□□□ -0.48
PIKFYVE-206ENST00000443896 ZNF815PA8K554 130 aa12.05□□□□□ -0.48
PIKFYVE-206ENST00000443896 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
PIKFYVE-206ENST00000443896 NAV2Q8IVL1 2488 aa12.04□□□□□ -0.48
PIKFYVE-206ENST00000443896 RHODO00212 210 aa12.04□□□□□ -0.48
PIKFYVE-206ENST00000443896 TRAV12-2A0A075B6T6 113 aa12.03□□□□□ -0.48
PIKFYVE-206ENST00000443896 A0A087WX48 190 aa12.03□□□□□ -0.48
PIKFYVE-206ENST00000443896 DUSP14O95147 198 aaKnown RBP12.03□□□□□ -0.48
PIKFYVE-206ENST00000443896 IGKV3-20P01619 116 aa12.03□□□□□ -0.48
PIKFYVE-206ENST00000443896 C18orf65Q6ZTR6 163 aa12.03□□□□□ -0.48
PIKFYVE-206ENST00000443896 TOMM6Q96B49 74 aa12.03□□□□□ -0.48
PIKFYVE-206ENST00000443896 C9orf85Q96MD7 179 aa12.03□□□□□ -0.48
PIKFYVE-206ENST00000443896 IGHV3-16A0A0C4DH30 117 aa12.03□□□□□ -0.48
PIKFYVE-206ENST00000443896 ATP6V0E2Q8NHE4 81 aa12.03□□□□□ -0.48
PIKFYVE-206ENST00000443896 NTN5Q8WTR8 489 aaPredicted RBP12.03□□□□□ -0.48
PIKFYVE-206ENST00000443896 DOPEY2Q9Y3R5 2298 aa12.02□□□□□ -0.48
PIKFYVE-206ENST00000443896 SLURP1P55000 103 aa12.02□□□□□ -0.48
PIKFYVE-206ENST00000443896 DEFB136Q30KP8 78 aa12.02□□□□□ -0.49
PIKFYVE-206ENST00000443896 LOC107984640A0A0U1RRK4 108 aa12.01□□□□□ -0.49
PIKFYVE-206ENST00000443896 SPINK13Q1W4C9 94 aa12.01□□□□□ -0.49
PIKFYVE-206ENST00000443896 JPT2Q9H910 190 aa12.01□□□□□ -0.49
PIKFYVE-206ENST00000443896 ABCA12Q86UK0 2595 aa12.01□□□□□ -0.49
PIKFYVE-206ENST00000443896 PRADC1Q9BSG0 188 aa12.01□□□□□ -0.49
PIKFYVE-206ENST00000443896 TRAV12-1A0A0B4J245 112 aa12.01□□□□□ -0.49
PIKFYVE-206ENST00000443896 TEX49A0A1B0GTD5 131 aa12.01□□□□□ -0.49
PIKFYVE-206ENST00000443896 LINC01619G3V211 115 aa12□□□□□ -0.49
PIKFYVE-206ENST00000443896 Q8N1Y9 231 aa12□□□□□ -0.49
PIKFYVE-206ENST00000443896 C15orf53Q8NAA6 179 aa12□□□□□ -0.49
PIKFYVE-206ENST00000443896 MDFICQ9P1T7 246 aa12□□□□□ -0.49
PIKFYVE-206ENST00000443896 TEX15Q9BXT5 2789 aa12□□□□□ -0.49
PIKFYVE-206ENST00000443896 IGHV1OR15-1A0A075B7D0 117 aa12□□□□□ -0.49
PIKFYVE-206ENST00000443896 SLC25A20O43772 301 aa12□□□□□ -0.49
PIKFYVE-206ENST00000443896 C4orf3Q8WVX3 66 aa12□□□□□ -0.49
PIKFYVE-206ENST00000443896 SCGB3A1Q96QR1 104 aa12□□□□□ -0.49
PIKFYVE-206ENST00000443896 CREBBPQ92793 2442 aa11.99□□□□□ -0.49
PIKFYVE-206ENST00000443896 TAL2Q16559 108 aa11.99□□□□□ -0.49
PIKFYVE-206ENST00000443896 SUMO4Q6EEV6 95 aa11.99□□□□□ -0.49
PIKFYVE-206ENST00000443896 TMEM86BQ8N661 226 aa11.99□□□□□ -0.49
PIKFYVE-206ENST00000443896 A0A087WWL8 130 aa11.99□□□□□ -0.49
PIKFYVE-206ENST00000443896 PLNP26678 52 aa11.99□□□□□ -0.49
PIKFYVE-206ENST00000443896 C2orf66Q6UXQ4 117 aa11.99□□□□□ -0.49
PIKFYVE-206ENST00000443896 ZNF469Q96JG9 3925 aaPredicted RBP11.99□□□□□ -0.49
PIKFYVE-206ENST00000443896 APCP25054 2843 aa11.98□□□□□ -0.49
PIKFYVE-206ENST00000443896 H7C1H1 209 aa11.98□□□□□ -0.49
PIKFYVE-206ENST00000443896 POLR2KP53803 58 aaKnown RBP11.98□□□□□ -0.49
PIKFYVE-206ENST00000443896 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
PIKFYVE-206ENST00000443896 EPG5Q9HCE0 2579 aa11.97□□□□□ -0.49
PIKFYVE-206ENST00000443896 F8VRH5 84 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms