RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 LCE2CQ5TA81 110 aa8.34□□□□□ -1.07
AC009404.1-202ENST00000439955 FAM74A4Q5TZK3 123 aa8.34□□□□□ -1.07
AC009404.1-202ENST00000439955 TNFRSF6BO95407 300 aa8.33□□□□□ -1.08
AC009404.1-202ENST00000439955 NCR2O95944 276 aa8.33□□□□□ -1.08
AC009404.1-202ENST00000439955 NPYP01303 97 aa8.33□□□□□ -1.08
AC009404.1-202ENST00000439955 NDUFA6P56556 154 aa8.33□□□□□ -1.08
AC009404.1-202ENST00000439955 ZNF56Q15929 161 aa8.33□□□□□ -1.08
AC009404.1-202ENST00000439955 SUMO4Q6EEV6 95 aa8.33□□□□□ -1.08
AC009404.1-202ENST00000439955 NRACQ8N912 160 aa8.33□□□□□ -1.08
AC009404.1-202ENST00000439955 OR4C5Q8NGB2 326 aa8.33□□□□□ -1.08
AC009404.1-202ENST00000439955 C20orf78Q9BR46 151 aa8.33□□□□□ -1.08
AC009404.1-202ENST00000439955 C11orf68Q9H3H3 251 aaKnown RBP8.33□□□□□ -1.08
AC009404.1-202ENST00000439955 TRGV2A0A075B6R0 118 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 GAGE12BA1L429 117 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 C5orf52A6NGY3 159 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 F5H697 171 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 SMKR1H3BMG3 65 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 GAGE7O76087 117 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 IGHV3-53P01767 116 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 GAGE12FP0CL80 117 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 GAGE12GP0CL81 117 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 GAGE12IP0CL82 117 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 ESDP10768 282 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 EMP1P54849 157 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 RPL32P62910 135 aaKnown RBP8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 FAM222AQ5U5X8 452 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 BAGE3Q86Y29 109 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 MAP1LC3AQ9H492 121 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 DKK2Q9UBU2 259 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 ABCA13Q86UQ4 5058 aa8.32□□□□□ -1.08
AC009404.1-202ENST00000439955 TRAV26-2A0A0B4J265 109 aa8.31□□□□□ -1.08
AC009404.1-202ENST00000439955 TRBV6-5A0A0K0K1A5 114 aa8.31□□□□□ -1.08
AC009404.1-202ENST00000439955 M0QY20 66 aa8.31□□□□□ -1.08
AC009404.1-202ENST00000439955 HOXA5P20719 270 aa8.31□□□□□ -1.08
AC009404.1-202ENST00000439955 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
AC009404.1-202ENST00000439955 CHCHD1Q96BP2 118 aaKnown RBP8.31□□□□□ -1.08
AC009404.1-202ENST00000439955 NXT2Q9NPJ8 142 aaKnown RBP8.31□□□□□ -1.08
AC009404.1-202ENST00000439955 NACAE9PAV3 2078 aa8.31□□□□□ -1.08
AC009404.1-202ENST00000439955 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
AC009404.1-202ENST00000439955 SPART-AS1P0CW21 52 aa8.3□□□□□ -1.08
AC009404.1-202ENST00000439955 PMCHP20382 165 aa8.3□□□□□ -1.08
AC009404.1-202ENST00000439955 SUMO2P61956 95 aaKnown RBP8.3□□□□□ -1.08
AC009404.1-202ENST00000439955 SNRPEP62304 92 aaKnown RBP8.3□□□□□ -1.08
AC009404.1-202ENST00000439955 IQCJQ1A5X6 159 aa8.3□□□□□ -1.08
AC009404.1-202ENST00000439955 ZNF479Q96JC4 524 aa8.3□□□□□ -1.08
AC009404.1-202ENST00000439955 DNAJC30Q96LL9 226 aa8.3□□□□□ -1.08
AC009404.1-202ENST00000439955 NIT2Q9NQR4 276 aa8.3□□□□□ -1.08
AC009404.1-202ENST00000439955 TRBV10-1A0A0K0K1A3 114 aa8.29□□□□□ -1.08
AC009404.1-202ENST00000439955 K7EMI3 77 aa8.29□□□□□ -1.08
AC009404.1-202ENST00000439955 SERF1AO75920 110 aa8.29□□□□□ -1.08
AC009404.1-202ENST00000439955 GATA1P15976 413 aaPredicted RBP8.29□□□□□ -1.08
AC009404.1-202ENST00000439955 LINC00310P59036 64 aa8.29□□□□□ -1.08
AC009404.1-202ENST00000439955 PRSS3P2Q8NHM4 247 aa8.29□□□□□ -1.08
AC009404.1-202ENST00000439955 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
AC009404.1-202ENST00000439955 ST20Q9HBF5 79 aa8.29□□□□□ -1.08
AC009404.1-202ENST00000439955 HECTD4Q9Y4D8 3996 aa8.29□□□□□ -1.08
AC009404.1-202ENST00000439955 DNAH10Q8IVF4 4471 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 IGHV3-73A0A0B4J1V6 119 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 TRBV6-4A0A1B0GX49 114 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 LINC01546A6NGU7 62 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 LINC00614P0C842 121 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 DEFB130BP0DP73 79 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 DEFB130AP0DP74 79 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 DAD1P61803 113 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 FA2HQ7L5A8 372 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 NIT1Q86X76 327 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 Q8N8P6 123 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 URB1-AS1Q96HZ7 61 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 PACRGQ96M98 296 aaPredicted RBP8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 SMIM2Q9BVW6 85 aa8.28□□□□□ -1.08
AC009404.1-202ENST00000439955 IGLV2-18A0A075B6J9 118 aa8.27□□□□□ -1.09
AC009404.1-202ENST00000439955 K7EQD1 137 aa8.27□□□□□ -1.09
AC009404.1-202ENST00000439955 DEFB4AO15263 64 aa8.27□□□□□ -1.09
AC009404.1-202ENST00000439955 HSBP1O75506 76 aa8.27□□□□□ -1.09
AC009404.1-202ENST00000439955 POLR2KP53803 58 aaKnown RBP8.27□□□□□ -1.09
AC009404.1-202ENST00000439955 RNASEKQ6P5S7 137 aaKnown RBP8.27□□□□□ -1.09
AC009404.1-202ENST00000439955 Q6ZSN1 163 aa8.27□□□□□ -1.09
AC009404.1-202ENST00000439955 HIST3H2BBQ8N257 126 aa8.27□□□□□ -1.09
AC009404.1-202ENST00000439955 AP5S1Q9NUS5 200 aa8.27□□□□□ -1.09
AC009404.1-202ENST00000439955 CELA1Q9UNI1 258 aa8.27□□□□□ -1.09
AC009404.1-202ENST00000439955 TRGV4A0A0C4DH28 118 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 TRBV27A0A0K0K1C4 114 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 LOC389332A0A1B0GUA5 103 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 A6NJY4 79 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 TCAPO15273 167 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 ATP5G1P05496 136 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 S100A2P29034 98 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 IFI27P40305 119 aaPredicted RBP8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 FHL2Q14192 279 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 RHOHQ15669 191 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 NEXN-AS1Q8NBZ9 246 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 TMEM18Q96B42 140 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 TMEM70Q9BUB7 260 aa8.26□□□□□ -1.09
AC009404.1-202ENST00000439955 SDHAF1A6NFY7 115 aa8.25□□□□□ -1.09
AC009404.1-202ENST00000439955 VCYO14598 125 aa8.25□□□□□ -1.09
AC009404.1-202ENST00000439955 NUPR1O60356 82 aa8.25□□□□□ -1.09
AC009404.1-202ENST00000439955 SLC25A29Q8N8R3 303 aa8.25□□□□□ -1.09
AC009404.1-202ENST00000439955 TNFRSF18Q9Y5U5 241 aa8.25□□□□□ -1.09
AC009404.1-202ENST00000439955 KMT2AQ03164 3969 aa8.25□□□□□ -1.09
AC009404.1-202ENST00000439955 RPL36AP83881 106 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms