RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 P01737 135 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRACP01848 142 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 SLC25A5P05141 298 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 SRP19P09132 144 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 LGALS1P09382 135 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 BCL2P10415 239 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 VDAC1P21796 283 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 PPP1CCP36873 323 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 MTPNP58546 118 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF90Q03938 601 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 IL15RAQ13261 267 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 VMA21Q3ZAQ7 101 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 Q499Y3 187 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 LCN12Q6JVE5 192 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF322Q6U7Q0 402 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 GAPTQ8N292 157 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 C3orf22Q8N5N4 141 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 ANKRD29Q8N6D5 301 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 TPRX1Q8N7U7 411 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 C5orf56Q8N8D9 126 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM213BQ8TBF2 198 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 MRPL30Q8TCC3 161 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 C18orf32Q8TCD1 76 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 PPDPFLQ8WWR9 84 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 AQP3Q92482 292 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM104AQ969W3 186 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 KCNS1Q96KK3 526 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM103A1Q9BTL3 118 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 TMEM147Q9BVK8 224 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 COMMD5Q9GZQ3 224 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 PBOV1Q9GZY1 135 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 VSIRQ9H7M9 311 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 LAMTOR3Q9UHA4 124 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 LINC00527Q9UJ94 153 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 AMMECR1Q9Y4X0 333 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRBV6-7A0A0A0MS04 114 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 A0A0U1RQV1 116 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 C3orf85A0A1B0GTC6 90 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM236AA0A1B0GUQ0 79 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM236BA0A1B0GV22 79 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 GRIFINA4D1Z8 144 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 NCBP2LA6PVI3 153 aaKnown RBP3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 C12orf77C9JDV5 145 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 H3BMG7 143 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 SYS1-DBNDD2H3BUS1 97 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 H7C1H1 209 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 J3QQQ9 107 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 M0R129 80 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF861PO60384 105 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 SERF1AO75920 110 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF688P0C7X2 276 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 SMIM13P0DJ93 91 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 SSBP1Q04837 148 aaKnown RBP3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 SLC25A48Q6ZT89 311 aaKnown RBP3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 TMEM179BQ7Z7N9 219 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRAPPC6BQ86SZ2 158 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 TMEM256Q8N2U0 113 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 OR9G1Q8NH87 305 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 OTOSQ8NHW6 89 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 COPS9Q8WXC6 57 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 EEF1AKMT3Q96AZ1 226 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 BORCS8Q96FH0 119 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 PRELID3AQ96N28 172 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 C20orf78Q9BR46 151 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 AGMATQ9BSE5 352 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 NRN1Q9NPD7 142 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 CYTL1Q9NRR1 136 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 KLK5Q9Y337 293 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 ARL2-SNX15V9GYD0 113 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRAV9-1A0A075B6T8 112 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 A0A0A6YYD4 124 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRAV13-1A0A0B4J241 112 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM240AA0A1B0GVK7 77 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM24AA6NFZ4 105 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 LINC01619G3V211 115 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 LY6LH3BQJ8 138 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 J3QT63 122 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 FFAR1O14842 300 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF737O75373 536 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 PSMB8P28062 276 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 RPS27P42677 84 aaKnown RBP3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 SMIM11AP58511 58 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 SNRPGP62308 76 aaKnown RBP3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 ETDBQ3ZM63 59 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 RPL7L1Q6DKI1 246 aaKnown RBP3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 LGALS9CQ6DKI2 356 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 AMTNQ6UX39 209 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 ATOH7Q8N100 152 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 C1orf158Q8N1D5 194 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 EXOC3-AS1Q8N2X6 119 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 OR10G2Q8NGC3 310 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 DLX4Q92988 240 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 TMEM59Q9BXS4 323 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 C21orf62Q9NYP8 219 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 MTFP1Q9UDX5 166 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 KLHDC2Q9Y2U9 406 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 PXMP4Q9Y6I8 212 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 VPS13DQ5THJ4 4388 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRAV26-2A0A0B4J265 109 aa3.03□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF324O75467 553 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms