RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 ADCYAP1P18509 176 aa12.54□□□□□ -0.4
HDAC6-205ENST00000423941 DNAH10Q8IVF4 4471 aa12.53□□□□□ -0.4
HDAC6-205ENST00000423941 IGHV3-38A0A0C4DH36 116 aa12.53□□□□□ -0.4
HDAC6-205ENST00000423941 MGPP08493 103 aa12.53□□□□□ -0.4
HDAC6-205ENST00000423941 C1orf134Q5TEV5 83 aa12.53□□□□□ -0.4
HDAC6-205ENST00000423941 RASL11AQ6T310 242 aa12.53□□□□□ -0.4
HDAC6-205ENST00000423941 FRZBQ92765 325 aa12.53□□□□□ -0.4
HDAC6-205ENST00000423941 BORCS7Q96B45 105 aa12.53□□□□□ -0.4
HDAC6-205ENST00000423941 TMEM191AQ9H0A3 160 aa12.53□□□□□ -0.4
HDAC6-205ENST00000423941 TRAV8-6A0A0B4J262 113 aa12.52□□□□□ -0.41
HDAC6-205ENST00000423941 PPP1R2P9O14990 202 aa12.52□□□□□ -0.41
HDAC6-205ENST00000423941 LINC01556Q5JQF7 62 aa12.52□□□□□ -0.41
HDAC6-205ENST00000423941 LINC00336Q6ZUF6 198 aa12.52□□□□□ -0.41
HDAC6-205ENST00000423941 SMIM15Q7Z3B0 74 aa12.52□□□□□ -0.41
HDAC6-205ENST00000423941 COMMD7Q86VX2 200 aa12.52□□□□□ -0.41
HDAC6-205ENST00000423941 GATD1Q8NB37 220 aa12.52□□□□□ -0.41
HDAC6-205ENST00000423941 NIT2Q9NQR4 276 aa12.52□□□□□ -0.41
HDAC6-205ENST00000423941 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.41
HDAC6-205ENST00000423941 DNAH2Q9P225 4427 aa12.51□□□□□ -0.41
HDAC6-205ENST00000423941 RIGQ13278 110 aa12.51□□□□□ -0.41
HDAC6-205ENST00000423941 DAZ4Q86SG3 579 aaKnown RBP12.51□□□□□ -0.41
HDAC6-205ENST00000423941 C6orf223Q8N319 242 aa12.51□□□□□ -0.41
HDAC6-205ENST00000423941 SEC11CQ9BY50 192 aa12.51□□□□□ -0.41
HDAC6-205ENST00000423941 DAZ3Q9NR90 486 aaKnown RBP12.51□□□□□ -0.41
HDAC6-205ENST00000423941 OR10J3Q5JRS4 329 aa12.5□□□□□ -0.41
HDAC6-205ENST00000423941 C10orf91Q5T1B1 145 aa12.5□□□□□ -0.41
HDAC6-205ENST00000423941 ANAPC16Q96DE5 110 aa12.5□□□□□ -0.41
HDAC6-205ENST00000423941 RNF185Q96GF1 192 aa12.5□□□□□ -0.41
HDAC6-205ENST00000423941 TRAV9-2A0A087WT02 112 aa12.49□□□□□ -0.41
HDAC6-205ENST00000423941 NTM-AS1Q6ZSK4 140 aa12.49□□□□□ -0.41
HDAC6-205ENST00000423941 TNFRSF18Q9Y5U5 241 aa12.49□□□□□ -0.41
HDAC6-205ENST00000423941 TRBV6-8A0A0A6YYG3 113 aa12.48□□□□□ -0.41
HDAC6-205ENST00000423941 F8W036 122 aa12.48□□□□□ -0.41
HDAC6-205ENST00000423941 MT-ND4LP03901 98 aa12.48□□□□□ -0.41
HDAC6-205ENST00000423941 RAB4AP20338 218 aa12.48□□□□□ -0.41
HDAC6-205ENST00000423941 Q6ZRN7 208 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-205ENST00000423941 DNAH17Q9UFH2 4485 aa12.47□□□□□ -0.41
HDAC6-205ENST00000423941 A0A1B0GW15 77 aa12.47□□□□□ -0.41
HDAC6-205ENST00000423941 A0A1B0GXF2 115 aa12.47□□□□□ -0.41
HDAC6-205ENST00000423941 TMEM97Q5BJF2 176 aa12.47□□□□□ -0.41
HDAC6-205ENST00000423941 TRAV26-2A0A0B4J265 109 aa12.46□□□□□ -0.41
HDAC6-205ENST00000423941 IBA57-AS1B1ANH7 110 aa12.46□□□□□ -0.41
HDAC6-205ENST00000423941 NIT1Q86X76 327 aa12.46□□□□□ -0.41
HDAC6-205ENST00000423941 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
HDAC6-205ENST00000423941 TRBV6-5A0A0K0K1A5 114 aa12.45□□□□□ -0.42
HDAC6-205ENST00000423941 A0A1B0GVY2 172 aa12.45□□□□□ -0.42
HDAC6-205ENST00000423941 AMN1Q8IY45 258 aa12.45□□□□□ -0.42
HDAC6-205ENST00000423941 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-205ENST00000423941 CARHSP1Q9Y2V2 147 aaKnown RBP12.45□□□□□ -0.42
HDAC6-205ENST00000423941 PRSS29PA6NIE9 313 aa12.44□□□□□ -0.42
HDAC6-205ENST00000423941 GAS8-AS1O95177 125 aa12.44□□□□□ -0.42
HDAC6-205ENST00000423941 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
HDAC6-205ENST00000423941 FAM104BQ5XKR9 115 aa12.44□□□□□ -0.42
HDAC6-205ENST00000423941 Q8N3U1 123 aa12.44□□□□□ -0.42
HDAC6-205ENST00000423941 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
HDAC6-205ENST00000423941 MRAP2Q96G30 205 aa12.44□□□□□ -0.42
HDAC6-205ENST00000423941 EPPK1P58107 5090 aaKnown RBP12.43□□□□□ -0.42
HDAC6-205ENST00000423941 ATP5L2Q7Z4Y8 100 aa12.43□□□□□ -0.42
HDAC6-205ENST00000423941 IMMP2LQ96T52 175 aa12.43□□□□□ -0.42
HDAC6-205ENST00000423941 CHCHD7Q9BUK0 85 aa12.43□□□□□ -0.42
HDAC6-205ENST00000423941 CTDSP1Q9GZU7 261 aa12.43□□□□□ -0.42
HDAC6-205ENST00000423941 FAT2Q9NYQ8 4349 aa12.43□□□□□ -0.42
HDAC6-205ENST00000423941 HBBP68871 147 aa12.42□□□□□ -0.42
HDAC6-205ENST00000423941 LAGE3Q14657 143 aa12.42□□□□□ -0.42
HDAC6-205ENST00000423941 IGHV3-30P01768 117 aa12.41□□□□□ -0.42
HDAC6-205ENST00000423941 IGHV3-33P01772 117 aa12.41□□□□□ -0.42
HDAC6-205ENST00000423941 IGHV3-30-3P0DP02 117 aa12.41□□□□□ -0.42
HDAC6-205ENST00000423941 IGHV3-30-5P0DP03 117 aa12.41□□□□□ -0.42
HDAC6-205ENST00000423941 CAMPP49913 170 aa12.41□□□□□ -0.42
HDAC6-205ENST00000423941 TNP2Q05952 138 aa12.41□□□□□ -0.42
HDAC6-205ENST00000423941 MRPL54Q6P161 138 aaKnown RBP12.41□□□□□ -0.42
HDAC6-205ENST00000423941 NFE4Q86UQ8 179 aa12.41□□□□□ -0.42
HDAC6-205ENST00000423941 S100A8P05109 93 aa12.4□□□□□ -0.42
HDAC6-205ENST00000423941 RPS10P46783 165 aaKnown RBP12.4□□□□□ -0.42
HDAC6-205ENST00000423941 POLR2KP53803 58 aaKnown RBP12.4□□□□□ -0.42
HDAC6-205ENST00000423941 MRPL51Q4U2R6 128 aaKnown RBP12.4□□□□□ -0.42
HDAC6-205ENST00000423941 TMEM242Q9NWH2 141 aa12.4□□□□□ -0.42
HDAC6-205ENST00000423941 TRBV25-1A0A075B6N4 114 aa12.39□□□□□ -0.43
HDAC6-205ENST00000423941 IGHV1-24A0A0C4DH33 117 aa12.39□□□□□ -0.43
HDAC6-205ENST00000423941 SDHAF1A6NFY7 115 aa12.39□□□□□ -0.43
HDAC6-205ENST00000423941 KCNIP4Q6PIL6 250 aa12.39□□□□□ -0.43
HDAC6-205ENST00000423941 NRACQ8N912 160 aa12.39□□□□□ -0.43
HDAC6-205ENST00000423941 TRBV24-1A0A075B6N3 115 aa12.37□□□□□ -0.43
HDAC6-205ENST00000423941 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
HDAC6-205ENST00000423941 NCR2O95944 276 aa12.37□□□□□ -0.43
HDAC6-205ENST00000423941 PPP1R17O96001 155 aa12.37□□□□□ -0.43
HDAC6-205ENST00000423941 PKIAP61925 76 aa12.37□□□□□ -0.43
HDAC6-205ENST00000423941 COTL1Q14019 142 aa12.37□□□□□ -0.43
HDAC6-205ENST00000423941 BTF3L4Q96K17 158 aa12.37□□□□□ -0.43
HDAC6-205ENST00000423941 TMEM70Q9BUB7 260 aa12.37□□□□□ -0.43
HDAC6-205ENST00000423941 PKD1P98161 4303 aa12.36□□□□□ -0.43
HDAC6-205ENST00000423941 A0A087WX48 190 aa12.36□□□□□ -0.43
HDAC6-205ENST00000423941 C7orf77A4D0Y5 90 aa12.36□□□□□ -0.43
HDAC6-205ENST00000423941 ATRAIDQ6UW56 229 aa12.36□□□□□ -0.43
HDAC6-205ENST00000423941 CLRN3Q8NCR9 226 aa12.36□□□□□ -0.43
HDAC6-205ENST00000423941 CHCHD5Q9BSY4 110 aa12.36□□□□□ -0.43
HDAC6-205ENST00000423941 ST20Q9HBF5 79 aa12.36□□□□□ -0.43
HDAC6-205ENST00000423941 URGCP-MRPS24S4R325 110 aa12.36□□□□□ -0.43
HDAC6-205ENST00000423941 TRAV9-1A0A075B6T8 112 aa12.35□□□□□ -0.43
HDAC6-205ENST00000423941 SMKR1H3BMG3 65 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms