RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 PTPRSQ13332 1948 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 NCOA6Q14686 2063 aaPredicted RBP2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 GON4LQ3T8J9 2241 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 COL5A1P20908 1838 aaPredicted RBP2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 TRBV19A0A075B6N1 114 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 TRAV41A0A0B4J266 112 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 RBMY1BA6NDE4 496 aaKnown RBP2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 RBMY1EA6NEQ0 496 aaKnown RBP2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 H7C2G1 150 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 M0R381 172 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 LYZL6O75951 148 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 RBMY1DP0C7P1 496 aaKnown RBP2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 RBMY1A1P0DJD3 496 aaKnown RBP2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 RBMY1CP0DJD4 496 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 ZNF22P17026 224 aaPredicted RBP2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 NBL1P41271 181 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 TNFRSF4P43489 277 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 PMAIP1Q13794 54 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 RBMY1FQ15415 496 aaKnown RBP2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 VKORC1L1Q8N0U8 176 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 CCL4L1Q8NHW4 92 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 DCANP1Q8TF63 244 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 BRK1Q8WUW1 75 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 LINC00167Q96N53 147 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 TIMM21Q9BVV7 248 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 DEFB126Q9BYW3 111 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 NDUFA4L2Q9NRX3 87 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 SLC25A15Q9Y619 301 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 MUC22E2RYF6 1773 aaPredicted RBP2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 GTF3C1Q12789 2109 aa2.38□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGKV1D-37A0A075B6S9 117 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGHV3-15A0A0B4J1V0 119 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGHV3-43A0A0B4J1X8 118 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 TMEM89A2RUT3 159 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 IQCF6A8MYZ5 107 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 LEPROTO15243 131 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 CXCL13O43927 109 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 SCRG1O75711 98 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 SAA1P0DJI8 122 aaPredicted RBP2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGHV3-43DP0DP04 118 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 CRIP1P50238 77 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 ERCC8Q13216 396 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 RPL39P5Q59GN2 51 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 PVRIGQ6DKI7 326 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 FAM19A1Q7Z5A9 133 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 MRPL55Q7Z7F7 128 aaKnown RBP2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 RNF182Q8N6D2 247 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 TMEM167AQ8TBQ9 72 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 SMCR5Q8TEV8 140 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 TIMM17AQ99595 171 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 SRXN1Q9BYN0 137 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 DPM3Q9P2X0 92 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 KIAA1549Q9HCM3 1950 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 TNRC6BQ9UPQ9 1833 aaKnown RBP2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 LRRK1Q38SD2 2015 aa2.37□□□□□ -2.03
SDCBPP3-201ENST00000419629 MKI67P46013 3256 aaKnown RBP2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGLV3-12A0A075B6K2 115 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 TRAV8-3A0A0A6YYJ7 113 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 TRAV26-2A0A0B4J265 109 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 A0A0J9YXY3 114 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 TRBV10-3A0A0K0K1G6 114 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 A0A0U1RQV1 116 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 DEFB108AA8MXU0 73 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 H3BRN7 92 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 COX7A2LO14548 114 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 TIMM17BO60830 172 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 MRPL33O75394 65 aaKnown RBP2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 SAA2P0DJI9 122 aaPredicted RBP2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 UBE2E1P51965 193 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 GFERP55789 205 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 RHOHQ15669 191 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 C16orf47Q6ZP98 133 aaPredicted RBP2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 PRR15Q8IV56 129 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 MUSTN1Q8IVN3 82 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 DYNAPQ8N1N2 210 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 LINC01561Q8N1V8 128 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 WFDC11Q8NEX6 87 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 PATE1Q8WXA2 126 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 MRPL53Q96EL3 112 aaKnown RBP2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 C16orf95Q9H693 158 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 PROK2Q9HC23 129 aa2.36□□□□□ -2.03
SDCBPP3-201ENST00000419629 ALPK2Q86TB3 2170 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGLV4-69A0A075B6H9 119 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 TRAV7A0A075B6U4 112 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 TRBV7-6A0A0J9YX20 115 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 PLAC8L1A1L4L8 177 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGHV1-69P01742 117 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGHV4-34P06331 123 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 XCL1P47992 114 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 CXCL6P80162 114 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 DAZ2Q13117 558 aaKnown RBP2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 MIAQ16674 131 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 SPANXN1Q5VSR9 72 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 Q6ZRU5 148 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 ZNF826PQ6ZT77 177 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 DAZ4Q86SG3 579 aaKnown RBP2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 WDR86Q86TI4 376 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 TMEM61Q8N0U2 210 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms