RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 C1orf229Q6ZS94 237 aaPredicted RBP9.82□□□□□ -0.84
SCAF8-203ENST00000417268 TRAV25A0A0B4J276 109 aa9.81□□□□□ -0.84
SCAF8-203ENST00000417268 IGHV3-16A0A0C4DH30 117 aa9.81□□□□□ -0.84
SCAF8-203ENST00000417268 EIF4EBP1Q13541 118 aaPredicted RBP9.81□□□□□ -0.84
SCAF8-203ENST00000417268 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
SCAF8-203ENST00000417268 MUSTN1Q8IVN3 82 aa9.81□□□□□ -0.84
SCAF8-203ENST00000417268 PFN2P35080 140 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 ATP6V0E2Q8NHE4 81 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 MBD6Q96DN6 1003 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 LINC01548A6NM66 108 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 ABCA12Q86UK0 2595 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 CHD7Q9P2D1 2997 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 FAM236AA0A1B0GUQ0 79 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 FAM236BA0A1B0GV22 79 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 Q6ZUT4 128 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 UBL5Q9BZL1 73 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 F5H768 121 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 MT-ATP8P03928 68 aa9.8□□□□□ -0.84
SCAF8-203ENST00000417268 SPANXB1Q9NS25 103 aaPredicted RBP9.8□□□□□ -0.84
SCAF8-203ENST00000417268 TINCRA0A1B0GVN0 87 aa9.79□□□□□ -0.84
SCAF8-203ENST00000417268 A0A1W2PPR1 153 aa9.79□□□□□ -0.84
SCAF8-203ENST00000417268 BAALC-AS2P0C853 105 aa9.79□□□□□ -0.84
SCAF8-203ENST00000417268 E9PLD3 99 aa9.79□□□□□ -0.84
SCAF8-203ENST00000417268 LY6G6DO95868 133 aa9.79□□□□□ -0.84
SCAF8-203ENST00000417268 KRTAP10-9P60411 292 aa9.79□□□□□ -0.84
SCAF8-203ENST00000417268 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
SCAF8-203ENST00000417268 CRYGBP07316 175 aa9.79□□□□□ -0.84
SCAF8-203ENST00000417268 ACYP1P07311 99 aa9.78□□□□□ -0.84
SCAF8-203ENST00000417268 HAMPP81172 84 aa9.78□□□□□ -0.84
SCAF8-203ENST00000417268 INSL3P51460 131 aa9.78□□□□□ -0.84
SCAF8-203ENST00000417268 ZMAT4Q9H898 229 aa9.78□□□□□ -0.84
SCAF8-203ENST00000417268 PCNTO95613 3336 aa9.78□□□□□ -0.84
SCAF8-203ENST00000417268 APRG1Q8IVJ8 170 aa9.78□□□□□ -0.84
SCAF8-203ENST00000417268 CFHR3Q02985 330 aa9.77□□□□□ -0.84
SCAF8-203ENST00000417268 A0A0J9YXV3 536 aa9.77□□□□□ -0.85
SCAF8-203ENST00000417268 RHOHQ15669 191 aa9.77□□□□□ -0.85
SCAF8-203ENST00000417268 RNF152Q8N8N0 203 aa9.77□□□□□ -0.85
SCAF8-203ENST00000417268 TRBV12-3P01733 135 aa9.77□□□□□ -0.85
SCAF8-203ENST00000417268 ICOSQ9Y6W8 199 aa9.77□□□□□ -0.85
SCAF8-203ENST00000417268 UNQ9165/PRO28630Q6UXU0 137 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 ZFP2Q6ZN57 461 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 BAALCQ8WXS3 180 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 CCDC140Q96MF4 163 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 TRAV13-2A0A0B4J235 113 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 Q6ZSV7 163 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 MLST8Q9BVC4 326 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 SPANXCQ9NY87 97 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 PRAC2D3DTV9 90 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 SRSF2Q01130 221 aaKnown RBP9.76□□□□□ -0.85
SCAF8-203ENST00000417268 ZNRF2Q8NHG8 242 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 DOPEY1Q5JWR5 2465 aa9.76□□□□□ -0.85
SCAF8-203ENST00000417268 NDUFA11Q86Y39 141 aa9.75□□□□□ -0.85
SCAF8-203ENST00000417268 EXPH5Q8NEV8 1989 aa9.75□□□□□ -0.85
SCAF8-203ENST00000417268 IGKV1D-37A0A075B6S9 117 aa9.75□□□□□ -0.85
SCAF8-203ENST00000417268 LINC00310P59036 64 aa9.75□□□□□ -0.85
SCAF8-203ENST00000417268 NACAE9PAV3 2078 aa9.75□□□□□ -0.85
SCAF8-203ENST00000417268 C11orf86A6NJI1 115 aa9.75□□□□□ -0.85
SCAF8-203ENST00000417268 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
SCAF8-203ENST00000417268 Q9H8V8 135 aa9.75□□□□□ -0.85
SCAF8-203ENST00000417268 HERV-K104P63124 156 aa9.75□□□□□ -0.85
SCAF8-203ENST00000417268 TMEM61Q8N0U2 210 aa9.75□□□□□ -0.85
SCAF8-203ENST00000417268 TCL1BO95988 128 aa9.74□□□□□ -0.85
SCAF8-203ENST00000417268 TM2D2Q9BX73 214 aa9.74□□□□□ -0.85
SCAF8-203ENST00000417268 ARHGAP32A7KAX9 2087 aa9.74□□□□□ -0.85
SCAF8-203ENST00000417268 TRBV6-1A0A0K0K1D8 114 aa9.74□□□□□ -0.85
SCAF8-203ENST00000417268 Q8N6K4 173 aa9.74□□□□□ -0.85
SCAF8-203ENST00000417268 TOMM6Q96B49 74 aa9.74□□□□□ -0.85
SCAF8-203ENST00000417268 TRBV10-2A0A0K0K1G8 114 aa9.74□□□□□ -0.85
SCAF8-203ENST00000417268 HERVK_113P63121 156 aa9.74□□□□□ -0.85
SCAF8-203ENST00000417268 SUMO4Q6EEV6 95 aa9.74□□□□□ -0.85
SCAF8-203ENST00000417268 RBMY1FQ15415 496 aaKnown RBP9.73□□□□□ -0.85
SCAF8-203ENST00000417268 NXPH4O95158 308 aa9.73□□□□□ -0.85
SCAF8-203ENST00000417268 MRPL23Q16540 153 aaKnown RBP9.73□□□□□ -0.85
SCAF8-203ENST00000417268 TNRC6BQ9UPQ9 1833 aaKnown RBP9.73□□□□□ -0.85
SCAF8-203ENST00000417268 IGKV2D-26A0A0A0MRZ7 120 aa9.73□□□□□ -0.85
SCAF8-203ENST00000417268 J3KT08 172 aa9.73□□□□□ -0.85
SCAF8-203ENST00000417268 C2orf91Q6ZV80 131 aa9.73□□□□□ -0.85
SCAF8-203ENST00000417268 NDUFV3P56181 108 aaKnown RBP9.73□□□□□ -0.85
SCAF8-203ENST00000417268 PIFOQ8TCI5 191 aa9.73□□□□□ -0.85
SCAF8-203ENST00000417268 RANBP2P49792 3224 aaKnown RBP9.72□□□□□ -0.85
SCAF8-203ENST00000417268 SS18Q15532 418 aa9.72□□□□□ -0.85
SCAF8-203ENST00000417268 A0A1B0GX51 115 aa9.72□□□□□ -0.85
SCAF8-203ENST00000417268 PSMG3-AS1Q96PY0 264 aa9.72□□□□□ -0.85
SCAF8-203ENST00000417268 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.72□□□□□ -0.85
SCAF8-203ENST00000417268 IGKV2-29A2NJV5 120 aaPredicted RBP9.72□□□□□ -0.85
SCAF8-203ENST00000417268 MRAPQ8TCY5 172 aa9.72□□□□□ -0.85
SCAF8-203ENST00000417268 CHD9Q3L8U1 2897 aa9.72□□□□□ -0.85
SCAF8-203ENST00000417268 IGKV3D-7A0A0C4DH55 119 aa9.71□□□□□ -0.85
SCAF8-203ENST00000417268 ATOX1O00244 68 aa9.71□□□□□ -0.85
SCAF8-203ENST00000417268 HILS1P60008 231 aa9.71□□□□□ -0.85
SCAF8-203ENST00000417268 C9orf47Q6ZRZ4 202 aa9.71□□□□□ -0.85
SCAF8-203ENST00000417268 A0A0B4J2C4 111 aa9.71□□□□□ -0.85
SCAF8-203ENST00000417268 LGALS9O00182 355 aa9.71□□□□□ -0.85
SCAF8-203ENST00000417268 CRLF1O75462 422 aa9.71□□□□□ -0.85
SCAF8-203ENST00000417268 NOP10Q9NPE3 64 aaKnown RBP9.71□□□□□ -0.85
SCAF8-203ENST00000417268 U3KQE9 123 aa9.71□□□□□ -0.85
SCAF8-203ENST00000417268 RBM3P98179 157 aaKnown RBP9.71□□□□□ -0.86
SCAF8-203ENST00000417268 CLEC2BQ92478 149 aa9.71□□□□□ -0.86
SCAF8-203ENST00000417268 Q8N976 141 aa9.71□□□□□ -0.86
SCAF8-203ENST00000417268 H3BT86 120 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms