RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 KRTAP26-1Q6PEX3 210 aa1.93□□□□□ -2.1
CTDSPL-203ENST00000416688 IFI27L1Q96BM0 104 aa1.93□□□□□ -2.1
CTDSPL-203ENST00000416688 ORMDL1Q9P0S3 153 aa1.93□□□□□ -2.1
CTDSPL-203ENST00000416688 NUP214P35658 2090 aaPredicted RBP1.93□□□□□ -2.1
CTDSPL-203ENST00000416688 NWD2Q9ULI1 1742 aa1.93□□□□□ -2.1
CTDSPL-203ENST00000416688 C1orf167Q5SNV9 1468 aa1.93□□□□□ -2.1
CTDSPL-203ENST00000416688 PTPRDP23468 1912 aa1.93□□□□□ -2.1
CTDSPL-203ENST00000416688 ABCA6Q8N139 1617 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 RNF17Q9BXT8 1623 aaKnown RBP1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 KIAA1549LQ6ZVL6 1849 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 SLX4Q8IY92 1834 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 A0A0D9SFI3 127 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 MYMXA0A1B0GTQ4 84 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 C2orf70A6NJV1 201 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 PCNX2A6NKB5 2137 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 CEBPZOSA8MTT3 80 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 SLPIP03973 132 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 SAA2P0DJI9 122 aaPredicted RBP1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 MOBPQ13875 183 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 PLGLAQ15195 96 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 KRTAP24-1Q3LI83 254 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 C1orf137Q5JT78 98 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 Q5VV11 94 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 Q6ZTI0 123 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 FAM223AQ8IWN6 122 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 C20orf197Q8N268 126 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 LENEPQ9Y5L5 61 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 V9GYH0 126 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 RGPD2P0DJD1 1756 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 PLXNA2O75051 1894 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 TANC1Q9C0D5 1861 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 PLXNA1Q9UIW2 1896 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 AGRNO00468 2067 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 MALRD1Q5VYJ5 2156 aa1.92□□□□□ -2.1
CTDSPL-203ENST00000416688 CLASP1Q7Z460 1538 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 TOP2BQ02880 1626 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 LCTP09848 1927 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 TCF20Q9UGU0 1960 aaKnown RBP1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 A0A0J9YY99 117 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 TEX49A0A1B0GTD5 131 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 IQCF6A8MYZ5 107 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 F8WEM9 126 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 FXYD1O00168 92 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 GCHFRP30047 84 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 ATP5EP2Q5VTU8 51 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 Q8N9P0 234 aaPredicted RBP1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 AMELXQ99217 191 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 CDC42SE2Q9NRR3 84 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 MRPL36Q9P0J6 103 aaKnown RBP1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 RGPD1P0DJD0 1748 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 ASXL1Q8IXJ9 1541 aa1.91□□□□□ -2.1
CTDSPL-203ENST00000416688 DIDO1Q9BTC0 2240 aaKnown RBP1.9□□□□□ -2.1
CTDSPL-203ENST00000416688 NUPR2A6NF83 97 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 IGKV3-20P01619 116 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 P0C880 135 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 CNBPP62633 177 aaKnown RBP1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 C14orf177Q52M58 125 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 Q86TA4 180 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 LINC00612Q8N6U2 182 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 LINC00167Q96N53 147 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 BPESC1Q9GZL8 116 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 TMEM14BQ9NUH8 114 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 PRO2289Q9P1D8 64 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 R4GN34 69 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 RAPGEF6Q8TEU7 1601 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 DOCK9Q9BZ29 2069 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 CUL9Q8IWT3 2517 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 CDK13Q14004 1512 aaKnown RBP1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 NEXMIFQ5QGS0 1516 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 FREM3P0C091 2139 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 NUMA1Q14980 2115 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 KIAA2026Q5HYC2 2103 aa1.9□□□□□ -2.11
CTDSPL-203ENST00000416688 PRXQ9BXM0 1461 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 KIAA1549Q9HCM3 1950 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 PIK3C2BO00750 1634 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 IGLV3-32A0A0A0MS00 114 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 TRBV6-7A0A0A0MS04 114 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 TRBV6-8A0A0A6YYG3 113 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 LOC101927531A0A1B0GV80 90 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 SNRPGP15A8MWD9 76 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 TFF1P04155 84 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 CTSGP08311 255 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 MDKP21741 143 aaPredicted RBP1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 SSBP1Q04837 148 aaKnown RBP1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 PYDC2Q56P42 97 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 CSAG1Q6PB30 78 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 SFTA2Q6UW10 78 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 C9orf163Q8N9P6 203 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 PPP1R1CQ8WVI7 109 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 VOPP1Q96AW1 172 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 NDUFA4L2Q9NRX3 87 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 GNG13Q9P2W3 67 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 KIF25-AS1Q9Y6Z4 181 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 HMGXB3Q12766 1538 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 KDM3BQ7LBC6 1761 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 ZNF318Q5VUA4 2279 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 CFAP43Q8NDM7 1665 aa1.89□□□□□ -2.11
CTDSPL-203ENST00000416688 COL27A1Q8IZC6 1860 aaPredicted RBP1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 LAMC1P11047 1609 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 MUC22E2RYF6 1773 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms