RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 DEFB113Q30KQ7 82 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 LYZL1Q6UWQ5 148 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 LY6G5BQ8NDX9 201 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 TMEM133Q9H2Q1 129 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 NXT2Q9NPJ8 142 aaKnown RBP7.08□□□□□ -1.28
SNHG3-201ENST00000413987 MRPL36Q9P0J6 103 aaKnown RBP7.08□□□□□ -1.28
SNHG3-201ENST00000413987 IGKV2D-26A0A0A0MRZ7 120 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 IGLC6P0CF74 106 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 VMA21Q3ZAQ7 101 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 LYRM7Q5U5X0 104 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 Q6ZSV7 163 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 VMO1Q7Z5L0 202 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 PRIMA1Q86XR5 153 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 MRPL20Q9BYC9 149 aaKnown RBP7.07□□□□□ -1.28
SNHG3-201ENST00000413987 SONP18583 2426 aaKnown RBP7.07□□□□□ -1.28
SNHG3-201ENST00000413987 E7EUB6 86 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 IGHV3-48P01763 117 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 PLGLAQ15195 96 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 NEXN-AS1Q8NBZ9 246 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 RBM12B-AS1Q9P1G2 102 aa7.07□□□□□ -1.28
SNHG3-201ENST00000413987 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.06□□□□□ -1.283e-34■■■■■ 63.2
SNHG3-201ENST00000413987 NPYP01303 97 aa7.06□□□□□ -1.28
SNHG3-201ENST00000413987 ZC2HC1BQ5TFG8 222 aa7.06□□□□□ -1.28
SNHG3-201ENST00000413987 HCP5Q6MZN7 132 aa7.06□□□□□ -1.28
SNHG3-201ENST00000413987 KRTAP1-3Q8IUG1 177 aa7.06□□□□□ -1.28
SNHG3-201ENST00000413987 HIST1H4GQ99525 98 aa7.06□□□□□ -1.28
SNHG3-201ENST00000413987 C20orf78Q9BR46 151 aa7.06□□□□□ -1.28
SNHG3-201ENST00000413987 ABCA1O95477 2261 aa7.06□□□□□ -1.28
SNHG3-201ENST00000413987 TRBV19A0A075B6N1 114 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 CRIP1P50238 77 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 FXYD7P58549 80 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 GTSCR1Q86UQ5 136 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 WFDC11Q8NEX6 87 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 TMEM158Q8WZ71 300 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 C17orf77Q96MU5 243 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 C11orf21Q9P2W6 132 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 A0A096LNT2 108 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 INSL3P51460 131 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 AMTNQ6UX39 209 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 Q6ZRU5 148 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 Q6ZUT4 128 aa7.05□□□□□ -1.28
SNHG3-201ENST00000413987 CR1P17927 2039 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 H0Y9J4 135 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 NDUFS5O43920 106 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 IGLV1-47P01700 117 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 IL4P05112 153 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 LYZP61626 148 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 CFAP126Q5VTH2 177 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 DYNAPQ8N1N2 210 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 LAMTOR3Q9UHA4 124 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 NF1P21359 2839 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 BAHCC1Q9P281 2608 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 IGLV9-49A0A0B4J1Y8 123 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 TMEM262E9PQX1 116 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 J3QQQ9 107 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 ATP6V0E1O15342 81 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 C10orf55Q5SWW7 151 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 RUSC1-AS1Q66K80 236 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 BRD3OSQ6XYD6 125 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 PPDPFLQ8WWR9 84 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 TTTY13Q9BZ97 58 aa7.04□□□□□ -1.28
SNHG3-201ENST00000413987 PLXNB1O43157 2135 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 TRBV7-3A0A075B6L6 115 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 BUB1B-PAK6H3BSN5 160 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 IGLV2-23P01705 113 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 MT-ATP8P03928 68 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 PLNP26678 52 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 MYOZ3Q8TDC0 251 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 FAM218AQ96MZ4 157 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 TNCP24821 2201 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 SH2D1AO60880 128 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 MEIG1Q5JSS6 88 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 FAM222AQ5U5X8 452 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 SHANK2-AS3Q9BTD1 123 aa7.03□□□□□ -1.28
SNHG3-201ENST00000413987 MTORP42345 2549 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 TRAV4A0A0B4J268 109 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 TRAV40A0A0B4J280 105 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 M0R1W7 72 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 MSMBP08118 114 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 IGHV4-38-2P0DP08 117 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 RPL27AP46776 148 aaKnown RBP7.02□□□□□ -1.29
SNHG3-201ENST00000413987 PDE6HQ13956 83 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 CLEC19AQ6UXS0 136 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 TEX29Q8N6K0 151 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 Q8N8P6 123 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
SNHG3-201ENST00000413987 LINC00311Q8N616 119 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 C8orf49Q96NF6 230 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 TMSB15BA0A087X1C1 80 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 IGHV1-3A0A0C4DH29 117 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 MYMXA0A1B0GTQ4 84 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 ODF3BA8MYP8 253 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 H3BRN7 92 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 PAX4O43316 350 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 RBP4P02753 201 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 SLC25A16P16260 332 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
SNHG3-201ENST00000413987 TEN1Q86WV5 123 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms