RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 DSCR9P59020 149 aa10.24□□□□□ -0.77
NUB1-201ENST00000413040 VPREB3Q9UKI3 123 aa10.24□□□□□ -0.77
NUB1-201ENST00000413040 G3V4G9 280 aa10.24□□□□□ -0.77
NUB1-201ENST00000413040 NXPH4O95158 308 aa10.24□□□□□ -0.77
NUB1-201ENST00000413040 P0DMU3 169 aa10.24□□□□□ -0.77
NUB1-201ENST00000413040 FAM231AP0DMU4 169 aa10.24□□□□□ -0.77
NUB1-201ENST00000413040 FAM231CP0DMU5 169 aa10.24□□□□□ -0.77
NUB1-201ENST00000413040 RRN3P1Q2M238 152 aa10.24□□□□□ -0.77
NUB1-201ENST00000413040 C11orf44Q8N8P7 122 aa10.24□□□□□ -0.77
NUB1-201ENST00000413040 MXRA5Q9NR99 2828 aa10.23□□□□□ -0.77
NUB1-201ENST00000413040 IGLV4-69A0A075B6H9 119 aa10.23□□□□□ -0.77
NUB1-201ENST00000413040 M0QY20 66 aa10.23□□□□□ -0.77
NUB1-201ENST00000413040 PROK1P58294 105 aa10.23□□□□□ -0.77
NUB1-201ENST00000413040 C9orf85Q96MD7 179 aa10.23□□□□□ -0.77
NUB1-201ENST00000413040 RNASE13Q5GAN3 156 aaKnown RBP10.22□□□□□ -0.77
NUB1-201ENST00000413040 ZNRF2Q8NHG8 242 aa10.22□□□□□ -0.77
NUB1-201ENST00000413040 A6NJY4 79 aa10.22□□□□□ -0.77
NUB1-201ENST00000413040 LGALS9O00182 355 aa10.22□□□□□ -0.77
NUB1-201ENST00000413040 LGALS3P17931 250 aaKnown RBP10.22□□□□□ -0.77
NUB1-201ENST00000413040 PAPPA-AS1Q5QFB9 102 aa10.22□□□□□ -0.77
NUB1-201ENST00000413040 KRTAP10-9P60411 292 aa10.22□□□□□ -0.77
NUB1-201ENST00000413040 MORN3Q6PF18 240 aaPredicted RBP10.22□□□□□ -0.77
NUB1-201ENST00000413040 TRBV27A0A0K0K1C4 114 aa10.21□□□□□ -0.77
NUB1-201ENST00000413040 GAGE13Q4V321 117 aa10.21□□□□□ -0.77
NUB1-201ENST00000413040 TRPT1Q86TN4 253 aaKnown RBP10.21□□□□□ -0.77
NUB1-201ENST00000413040 ELANEP08246 267 aa10.21□□□□□ -0.78
NUB1-201ENST00000413040 TSPEAR-AS2P59090 65 aa10.21□□□□□ -0.78
NUB1-201ENST00000413040 TMEM141Q96I45 108 aa10.21□□□□□ -0.78
NUB1-201ENST00000413040 JMJD1CQ15652 2540 aa10.21□□□□□ -0.78
NUB1-201ENST00000413040 A0A1B0GWB2 263 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 H7C2G1 150 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 VCX2Q9H322 139 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 ZNF702PQ9H963 129 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 ACANP16112 2415 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 IGHV3OR16-12A0A075B7B8 117 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 PSMB2P49721 201 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 CEMP1Q6PRD7 247 aaPredicted RBP10.2□□□□□ -0.78
NUB1-201ENST00000413040 ZNF418Q8TF45 676 aaPredicted RBP10.2□□□□□ -0.78
NUB1-201ENST00000413040 TIMM17AQ99595 171 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 MTORP42345 2549 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 FBN2P35556 2912 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 A0A0J9YXV3 536 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 RBMY1A1P0DJD3 496 aaKnown RBP10.2□□□□□ -0.78
NUB1-201ENST00000413040 RBMY1CP0DJD4 496 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 RBMY1FQ15415 496 aaKnown RBP10.2□□□□□ -0.78
NUB1-201ENST00000413040 DYNLRB2Q8TF09 96 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 UBE2E2Q96LR5 201 aa10.2□□□□□ -0.78
NUB1-201ENST00000413040 TRGV11A0A075B6L2 103 aa10.19□□□□□ -0.78
NUB1-201ENST00000413040 J3QQQ9 107 aa10.19□□□□□ -0.78
NUB1-201ENST00000413040 POM121L12Q8N7R1 296 aa10.19□□□□□ -0.78
NUB1-201ENST00000413040 A0A0J9YY99 117 aa10.19□□□□□ -0.78
NUB1-201ENST00000413040 TMEM61Q8N0U2 210 aa10.19□□□□□ -0.78
NUB1-201ENST00000413040 ZNF580Q9UK33 172 aa10.19□□□□□ -0.78
NUB1-201ENST00000413040 ADARB2-AS1A8MUL3 147 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 I3L3M4 83 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 SPXQ9BT56 116 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 USP24Q9UPU5 2620 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 SCGB1C2P0DMR2 95 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 Q9UF83 564 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 TNFRSF18Q9Y5U5 241 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 TRAV2A0A0B4J234 112 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 TRBV6-5A0A0K0K1A5 114 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 F8W1H4 67 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 J3QLI3 93 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 Q6YL49 198 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 ODF3Q96PU9 254 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 GTSF1LQ9H1H1 148 aa10.18□□□□□ -0.78
NUB1-201ENST00000413040 IGHV3-38A0A0C4DH36 116 aa10.17□□□□□ -0.78
NUB1-201ENST00000413040 A0A1W2PRX2 142 aa10.17□□□□□ -0.78
NUB1-201ENST00000413040 CD28P10747 220 aa10.17□□□□□ -0.78
NUB1-201ENST00000413040 RPL32P62910 135 aaKnown RBP10.17□□□□□ -0.78
NUB1-201ENST00000413040 C20orf203Q8NBC4 194 aa10.17□□□□□ -0.78
NUB1-201ENST00000413040 LINC01587Q99440 93 aa10.17□□□□□ -0.78
NUB1-201ENST00000413040 IGHV4-31P0DP07 118 aa10.17□□□□□ -0.78
NUB1-201ENST00000413040 CHD6Q8TD26 2715 aa10.16□□□□□ -0.78
NUB1-201ENST00000413040 J3QR89 54 aa10.16□□□□□ -0.78
NUB1-201ENST00000413040 TSSC4Q9Y5U2 329 aaPredicted RBP10.16□□□□□ -0.78
NUB1-201ENST00000413040 TMEM89A2RUT3 159 aa10.16□□□□□ -0.78
NUB1-201ENST00000413040 RAX2Q96IS3 184 aa10.16□□□□□ -0.78
NUB1-201ENST00000413040 Q96MF0 132 aa10.16□□□□□ -0.78
NUB1-201ENST00000413040 SPAG8Q99932 426 aaPredicted RBP10.16□□□□□ -0.78
NUB1-201ENST00000413040 A0A096LNT2 108 aa10.15□□□□□ -0.78
NUB1-201ENST00000413040 TSPAN13O95857 204 aa10.15□□□□□ -0.78
NUB1-201ENST00000413040 INSL3P51460 131 aa10.15□□□□□ -0.78
NUB1-201ENST00000413040 BBC3Q96PG8 261 aaPredicted RBP10.15□□□□□ -0.78
NUB1-201ENST00000413040 SPANXB1Q9NS25 103 aaPredicted RBP10.15□□□□□ -0.78
NUB1-201ENST00000413040 PRSS2P07478 247 aa10.15□□□□□ -0.78
NUB1-201ENST00000413040 RHOHQ15669 191 aa10.15□□□□□ -0.78
NUB1-201ENST00000413040 CFAP161Q6P656 301 aa10.15□□□□□ -0.78
NUB1-201ENST00000413040 DLX4Q92988 240 aaPredicted RBP10.15□□□□□ -0.78
NUB1-201ENST00000413040 H3BMM0 161 aa10.14□□□□□ -0.79
NUB1-201ENST00000413040 IGLV4-3A0A075B6K6 122 aa10.14□□□□□ -0.79
NUB1-201ENST00000413040 LINC01619G3V211 115 aa10.14□□□□□ -0.79
NUB1-201ENST00000413040 XCL2Q9UBD3 114 aa10.14□□□□□ -0.79
NUB1-201ENST00000413040 RBMY1BA6NDE4 496 aaKnown RBP10.14□□□□□ -0.79
NUB1-201ENST00000413040 RBMY1EA6NEQ0 496 aaKnown RBP10.14□□□□□ -0.79
NUB1-201ENST00000413040 RBMY1DP0C7P1 496 aaKnown RBP10.14□□□□□ -0.79
NUB1-201ENST00000413040 SMAGPQ0VAQ4 97 aa10.14□□□□□ -0.79
NUB1-201ENST00000413040 NSUN5P1Q3KNT7 163 aa10.14□□□□□ -0.79
NUB1-201ENST00000413040 ZNF22P17026 224 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms