RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 RHODO00212 210 aa12.28□□□□□ -0.44
LIMS2-208ENST00000410011 ARL17AQ8IVW1 177 aa12.28□□□□□ -0.44
LIMS2-208ENST00000410011 PRO1854Q9UHT4 67 aa12.28□□□□□ -0.44
LIMS2-208ENST00000410011 ZNF22P17026 224 aaPredicted RBP12.28□□□□□ -0.44
LIMS2-208ENST00000410011 PSMB2P49721 201 aa12.28□□□□□ -0.44
LIMS2-208ENST00000410011 DEFB104AQ8WTQ1 72 aa12.28□□□□□ -0.44
LIMS2-208ENST00000410011 GTSF1LQ9H1H1 148 aa12.28□□□□□ -0.44
LIMS2-208ENST00000410011 IGLV4-3A0A075B6K6 122 aa12.27□□□□□ -0.44
LIMS2-208ENST00000410011 A0A096LNT2 108 aa12.27□□□□□ -0.44
LIMS2-208ENST00000410011 PTH2Q96A98 100 aa12.27□□□□□ -0.44
LIMS2-208ENST00000410011 VCX2Q9H322 139 aa12.27□□□□□ -0.44
LIMS2-208ENST00000410011 NCOR2Q9Y618 2525 aa12.27□□□□□ -0.45
LIMS2-208ENST00000410011 HOXD3P31249 432 aaPredicted RBP12.27□□□□□ -0.45
LIMS2-208ENST00000410011 MTURNQ8N3F0 131 aa12.27□□□□□ -0.45
LIMS2-208ENST00000410011 VPREB3Q9UKI3 123 aa12.27□□□□□ -0.45
LIMS2-208ENST00000410011 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.26□□□□□ -0.45
LIMS2-208ENST00000410011 OPRPNQ99935 248 aaPredicted RBP12.26□□□□□ -0.45
LIMS2-208ENST00000410011 TRAV2A0A0B4J234 112 aa12.26□□□□□ -0.45
LIMS2-208ENST00000410011 INSL3P51460 131 aa12.26□□□□□ -0.45
LIMS2-208ENST00000410011 Q5PR19 223 aa12.26□□□□□ -0.45
LIMS2-208ENST00000410011 CHD8Q9HCK8 2581 aa12.25□□□□□ -0.45
LIMS2-208ENST00000410011 A0A0B4J2C4 111 aa12.25□□□□□ -0.45
LIMS2-208ENST00000410011 CELSR1Q9NYQ6 3014 aa12.25□□□□□ -0.45
LIMS2-208ENST00000410011 M0QXV9 152 aa12.25□□□□□ -0.45
LIMS2-208ENST00000410011 TCL1BO95988 128 aa12.25□□□□□ -0.45
LIMS2-208ENST00000410011 FSHBP01225 129 aa12.24□□□□□ -0.45
LIMS2-208ENST00000410011 MRPS36P82909 103 aaKnown RBP12.24□□□□□ -0.45
LIMS2-208ENST00000410011 Q6YL49 198 aa12.24□□□□□ -0.45
LIMS2-208ENST00000410011 ZNF702PQ9H963 129 aa12.24□□□□□ -0.45
LIMS2-208ENST00000410011 VPS13CQ709C8 3753 aa12.24□□□□□ -0.45
LIMS2-208ENST00000410011 A8MWV9 139 aa12.23□□□□□ -0.45
LIMS2-208ENST00000410011 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
LIMS2-208ENST00000410011 RBMY1A1P0DJD3 496 aaKnown RBP12.23□□□□□ -0.45
LIMS2-208ENST00000410011 RBMY1CP0DJD4 496 aa12.23□□□□□ -0.45
LIMS2-208ENST00000410011 SMAGPQ0VAQ4 97 aa12.23□□□□□ -0.45
LIMS2-208ENST00000410011 RBMY1FQ15415 496 aaKnown RBP12.23□□□□□ -0.45
LIMS2-208ENST00000410011 TCTEX1D4Q5JR98 221 aa12.23□□□□□ -0.45
LIMS2-208ENST00000410011 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-208ENST00000410011 A0A0J9YXV3 536 aa12.22□□□□□ -0.45
LIMS2-208ENST00000410011 A4D1N5 150 aa12.22□□□□□ -0.45
LIMS2-208ENST00000410011 M0R2P5 195 aa12.22□□□□□ -0.45
LIMS2-208ENST00000410011 TMEM263Q8WUH6 116 aaKnown RBP12.22□□□□□ -0.45
LIMS2-208ENST00000410011 PPDPFLQ8WWR9 84 aa12.22□□□□□ -0.45
LIMS2-208ENST00000410011 FAM104AQ969W3 186 aa12.22□□□□□ -0.45
LIMS2-208ENST00000410011 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
LIMS2-208ENST00000410011 LINC00467Q9BRT7 94 aa12.22□□□□□ -0.45
LIMS2-208ENST00000410011 ITPR1Q14643 2758 aa12.22□□□□□ -0.45
LIMS2-208ENST00000410011 H3BMM0 161 aa12.21□□□□□ -0.46
LIMS2-208ENST00000410011 TGFAP01135 160 aa12.2□□□□□ -0.46
LIMS2-208ENST00000410011 SFTA2Q6UW10 78 aa12.2□□□□□ -0.46
LIMS2-208ENST00000410011 MUSTN1Q8IVN3 82 aa12.2□□□□□ -0.46
LIMS2-208ENST00000410011 ZNF418Q8TF45 676 aaPredicted RBP12.2□□□□□ -0.46
LIMS2-208ENST00000410011 TNFRSF18Q9Y5U5 241 aa12.2□□□□□ -0.46
LIMS2-208ENST00000410011 CSPG4Q6UVK1 2322 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 A0A0J9YXY3 114 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 SCGB1C2P0DMR2 95 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 IGHV3-30-3P0DP02 117 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 Q8N2B8 174 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 LINC01600Q96MT4 127 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 DUX5Q96PT3 197 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 SPANXA1Q9NS26 97 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 ERG28Q9UKR5 140 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 EIF4EBP3O60516 100 aaPredicted RBP12.19□□□□□ -0.46
LIMS2-208ENST00000410011 CD28P10747 220 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 CDIP1Q9H305 208 aa12.19□□□□□ -0.46
LIMS2-208ENST00000410011 DOPEY2Q9Y3R5 2298 aa12.18□□□□□ -0.46
LIMS2-208ENST00000410011 KNCNA6PVL3 124 aa12.18□□□□□ -0.46
LIMS2-208ENST00000410011 DEFB131AP59861 70 aa12.18□□□□□ -0.46
LIMS2-208ENST00000410011 CARD19Q96LW7 228 aa12.18□□□□□ -0.46
LIMS2-208ENST00000410011 DOPEY1Q5JWR5 2465 aa12.18□□□□□ -0.46
LIMS2-208ENST00000410011 IGHV1-58A0A0C4DH39 117 aa12.17□□□□□ -0.46
LIMS2-208ENST00000410011 TINCRA0A1B0GVN0 87 aa12.17□□□□□ -0.46
LIMS2-208ENST00000410011 ZNF415Q09FC8 603 aa12.17□□□□□ -0.46
LIMS2-208ENST00000410011 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
LIMS2-208ENST00000410011 TIMM21Q9BVV7 248 aa12.17□□□□□ -0.46
LIMS2-208ENST00000410011 LITAFQ99732 161 aa12.17□□□□□ -0.46
LIMS2-208ENST00000410011 SPG11Q96JI7 2443 aa12.16□□□□□ -0.46
LIMS2-208ENST00000410011 CIDEAO60543 219 aa12.16□□□□□ -0.46
LIMS2-208ENST00000410011 NRGNQ92686 78 aa12.16□□□□□ -0.46
LIMS2-208ENST00000410011 RNF183Q96D59 192 aa12.16□□□□□ -0.46
LIMS2-208ENST00000410011 CHCHD7Q9BUK0 85 aa12.16□□□□□ -0.46
LIMS2-208ENST00000410011 PEMTQ9UBM1 199 aa12.16□□□□□ -0.46
LIMS2-208ENST00000410011 RBMY1BA6NDE4 496 aaKnown RBP12.16□□□□□ -0.46
LIMS2-208ENST00000410011 RBMY1EA6NEQ0 496 aaKnown RBP12.16□□□□□ -0.46
LIMS2-208ENST00000410011 RBMY1DP0C7P1 496 aaKnown RBP12.16□□□□□ -0.46
LIMS2-208ENST00000410011 DUX3Q96PT4 197 aa12.16□□□□□ -0.46
LIMS2-208ENST00000410011 SPXQ9BT56 116 aa12.16□□□□□ -0.46
LIMS2-208ENST00000410011 SPANXDQ9BXN6 97 aa12.16□□□□□ -0.46
LIMS2-208ENST00000410011 SPANXCQ9NY87 97 aa12.16□□□□□ -0.46
LIMS2-208ENST00000410011 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.46
LIMS2-208ENST00000410011 UBE2D4Q9Y2X8 147 aa12.15□□□□□ -0.46
LIMS2-208ENST00000410011 TRBV30A0A0K0K1B3 111 aa12.15□□□□□ -0.46
LIMS2-208ENST00000410011 PROK1P58294 105 aa12.15□□□□□ -0.46
LIMS2-208ENST00000410011 CLUHP3Q96NS8 147 aa12.15□□□□□ -0.46
LIMS2-208ENST00000410011 IGHV3-64A0A075B6Q5 118 aa12.14□□□□□ -0.47
LIMS2-208ENST00000410011 IGHV3-53P01767 116 aa12.14□□□□□ -0.47
LIMS2-208ENST00000410011 SLURP1P55000 103 aa12.14□□□□□ -0.47
LIMS2-208ENST00000410011 RAX2Q96IS3 184 aa12.14□□□□□ -0.47
LIMS2-208ENST00000410011 C11orf72Q8NBR9 251 aa12.14□□□□□ -0.47
LIMS2-208ENST00000410011 VSIG2Q96IQ7 327 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms